RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 USHBP1Q8N6Y0 703 aa11.06□□□□□ -0.64
SND1-202ENST00000461056 CDCA7Q9BWT1 371 aaPredicted RBP11.06□□□□□ -0.64
SND1-202ENST00000461056 USP35Q9P2H5 1018 aa11.06□□□□□ -0.64
SND1-202ENST00000461056 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
SND1-202ENST00000461056 CCDC9Q9Y3X0 531 aaKnown RBP11.05□□□□□ -0.64
SND1-202ENST00000461056 RGPD2P0DJD1 1756 aa11.05□□□□□ -0.64
SND1-202ENST00000461056 IL2RBP14784 551 aa11.04□□□□□ -0.64
SND1-202ENST00000461056 CNGB1Q14028 1251 aaPredicted RBP11.04□□□□□ -0.64
SND1-202ENST00000461056 MARCH10Q8NA82 808 aaPredicted RBP11.04□□□□□ -0.64
SND1-202ENST00000461056 DIAPH1O60610 1272 aaKnown RBP11.03□□□□□ -0.64
SND1-202ENST00000461056 DSG3P32926 999 aa11.03□□□□□ -0.64
SND1-202ENST00000461056 PKD1L3Q7Z443 1732 aa11.03□□□□□ -0.64
SND1-202ENST00000461056 SHANK3Q9BYB0 1731 aa11.03□□□□□ -0.64
SND1-202ENST00000461056 BRWD3Q6RI45 1802 aa11.02□□□□□ -0.64
SND1-202ENST00000461056 KRT27Q7Z3Y8 459 aa11.02□□□□□ -0.65
SND1-202ENST00000461056 CCDC184Q52MB2 194 aa11.01□□□□□ -0.65
SND1-202ENST00000461056 RSPH6AQ9H0K4 717 aa11.01□□□□□ -0.65
SND1-202ENST00000461056 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.01□□□□□ -0.657e-11■■□□□ 13.3
SND1-202ENST00000461056 CYP27B1O15528 508 aa11□□□□□ -0.65
SND1-202ENST00000461056 DDB1Q16531 1140 aa11□□□□□ -0.65
SND1-202ENST00000461056 SULT6B1Q6IMI4 303 aa11□□□□□ -0.65
SND1-202ENST00000461056 FAM182BQ5T319 152 aa10.99□□□□□ -0.65
SND1-202ENST00000461056 ZCRB1Q8TBF4 217 aaKnown RBP10.99□□□□□ -0.65
SND1-202ENST00000461056 EXOC5O00471 708 aa10.98□□□□□ -0.65
SND1-202ENST00000461056 TATP17735 454 aaPredicted RBP10.98□□□□□ -0.65
SND1-202ENST00000461056 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
SND1-202ENST00000461056 RAPGEF4Q8WZA2 1011 aa10.98□□□□□ -0.65
SND1-202ENST00000461056 CFAP53Q96M91 514 aa10.98□□□□□ -0.65
SND1-202ENST00000461056 PLEKHF1Q96S99 279 aa10.98□□□□□ -0.65
SND1-202ENST00000461056 HMOX1P09601 288 aa10.97□□□□□ -0.65
SND1-202ENST00000461056 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
SND1-202ENST00000461056 PTF1AQ7RTS3 328 aa10.97□□□□□ -0.65
SND1-202ENST00000461056 UPF1Q92900 1129 aaKnown RBP eCLIP10.97□□□□□ -0.65
SND1-202ENST00000461056 KDM6AO15550 1401 aaPredicted RBP10.97□□□□□ -0.65
SND1-202ENST00000461056 ADAMTS7Q9UKP4 1686 aa10.96□□□□□ -0.65
SND1-202ENST00000461056 PCDH11XQ9BZA7 1347 aa10.96□□□□□ -0.65
SND1-202ENST00000461056 PCDH11YQ9BZA8 1340 aa10.96□□□□□ -0.65
SND1-202ENST00000461056 SOCS7O14512 581 aa10.96□□□□□ -0.65
SND1-202ENST00000461056 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
SND1-202ENST00000461056 PHKG2P15735 406 aa10.96□□□□□ -0.65
SND1-202ENST00000461056 PHACTR3Q96KR7 559 aa10.96□□□□□ -0.65
SND1-202ENST00000461056 FCHSD2O94868 740 aa10.95□□□□□ -0.66
SND1-202ENST00000461056 PDE3BQ13370 1112 aa10.95□□□□□ -0.66
SND1-202ENST00000461056 FAM196AQ6ZSG2 479 aa10.95□□□□□ -0.66
SND1-202ENST00000461056 TOGARAM1Q9Y4F4 1720 aa10.95□□□□□ -0.66
SND1-202ENST00000461056 MRC1P22897 1456 aa10.94□□□□□ -0.66
SND1-202ENST00000461056 A0A0G2JS52 829 aa10.94□□□□□ -0.66
SND1-202ENST00000461056 U2SURPO15042 1029 aaKnown RBP10.94□□□□□ -0.66
SND1-202ENST00000461056 ANP32CO43423 234 aa10.94□□□□□ -0.66
SND1-202ENST00000461056 U2AF1L5P0DN76 240 aaPredicted RBP10.94□□□□□ -0.66
SND1-202ENST00000461056 PRKAR2BP31323 418 aa10.94□□□□□ -0.66
SND1-202ENST00000461056 U2AF1Q01081 240 aaKnown RBP eCLIP10.94□□□□□ -0.66
SND1-202ENST00000461056 MYT1Q01538 1121 aa10.94□□□□□ -0.66
SND1-202ENST00000461056 MTHFSDQ2M296 383 aaKnown RBP10.94□□□□□ -0.66
SND1-202ENST00000461056 AMOTQ4VCS5 1084 aa10.94□□□□□ -0.66
SND1-202ENST00000461056 PNISRQ8TF01 805 aaKnown RBP10.94□□□□□ -0.66
SND1-202ENST00000461056 NUDCQ9Y266 331 aa10.94□□□□□ -0.66
SND1-202ENST00000461056 TNS1Q9HBL0 1735 aaKnown RBP10.94□□□□□ -0.66
SND1-202ENST00000461056 NHSQ6T4R5 1651 aa10.93□□□□□ -0.66
SND1-202ENST00000461056 KCNQ2O43526 872 aa10.93□□□□□ -0.66
SND1-202ENST00000461056 FOXD4L1Q9NU39 408 aa10.93□□□□□ -0.66
SND1-202ENST00000461056 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
SND1-202ENST00000461056 SPG7Q9UQ90 795 aa10.93□□□□□ -0.66
SND1-202ENST00000461056 CEMIPQ8WUJ3 1361 aa10.92□□□□□ -0.66
SND1-202ENST00000461056 PLEKHO1Q53GL0 409 aaPredicted RBP10.92□□□□□ -0.66
SND1-202ENST00000461056 ZNF530Q6P9A1 599 aaPredicted RBP10.92□□□□□ -0.66
SND1-202ENST00000461056 DDX54Q8TDD1 881 aaKnown RBP10.92□□□□□ -0.66
SND1-202ENST00000461056 BCL11BQ9C0K0 894 aaPredicted RBP10.92□□□□□ -0.66
SND1-202ENST00000461056 ADAMTS8Q9UP79 889 aa10.92□□□□□ -0.66
SND1-202ENST00000461056 SRCAPQ6ZRS2 3230 aa10.92□□□□□ -0.66
SND1-202ENST00000461056 ABCB7O75027 752 aa10.91□□□□□ -0.66
SND1-202ENST00000461056 IFNL2Q8IZJ0 200 aa10.91□□□□□ -0.66
SND1-202ENST00000461056 TRIM37O94972 964 aa10.9□□□□□ -0.66
SND1-202ENST00000461056 AKAP4Q5JQC9 854 aa10.9□□□□□ -0.66
SND1-202ENST00000461056 DIEXFQ68CQ4 756 aaKnown RBP10.9□□□□□ -0.66
SND1-202ENST00000461056 CCDC125Q86Z20 511 aa10.9□□□□□ -0.66
SND1-202ENST00000461056 DCAF5Q96JK2 942 aa10.9□□□□□ -0.66
SND1-202ENST00000461056 SBF2Q86WG5 1849 aa10.9□□□□□ -0.66
SND1-202ENST00000461056 MAP3K5Q99683 1374 aa10.9□□□□□ -0.67
SND1-202ENST00000461056 DOT1LQ8TEK3 1739 aa10.89□□□□□ -0.67
SND1-202ENST00000461056 CCER2I3L3R5 266 aa10.89□□□□□ -0.67
SND1-202ENST00000461056 PRIM1P49642 420 aaKnown RBP10.89□□□□□ -0.67
SND1-202ENST00000461056 CAMKK2Q96RR4 588 aa10.89□□□□□ -0.67
SND1-202ENST00000461056 ERVV-2B6SEH9 535 aa10.88□□□□□ -0.67
SND1-202ENST00000461056 PROM2Q8N271 834 aa10.88□□□□□ -0.67
SND1-202ENST00000461056 IL17REQ8NFR9 667 aa10.88□□□□□ -0.67
SND1-202ENST00000461056 GAS2L2Q8NHY3 880 aa10.88□□□□□ -0.67
SND1-202ENST00000461056 PIGBQ92521 554 aa10.88□□□□□ -0.67
SND1-202ENST00000461056 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
SND1-202ENST00000461056 MRS2Q9HD23 443 aa10.88□□□□□ -0.67
SND1-202ENST00000461056 RGPD3A6NKT7 1758 aaPredicted RBP10.88□□□□□ -0.67
SND1-202ENST00000461056 RGPD4Q7Z3J3 1758 aa10.88□□□□□ -0.67
SND1-202ENST00000461056 ZBTB22O15209 634 aa10.87□□□□□ -0.67
SND1-202ENST00000461056 RNMTO43148 476 aaKnown RBP10.87□□□□□ -0.67
SND1-202ENST00000461056 HSP90AB1P08238 724 aaKnown RBP10.87□□□□□ -0.67
SND1-202ENST00000461056 NFE2L2Q16236 605 aa10.87□□□□□ -0.67
SND1-202ENST00000461056 MPRIPQ6WCQ1 1025 aa10.87□□□□□ -0.67
SND1-202ENST00000461056 MIER1Q8N108 512 aa10.87□□□□□ -0.67
SND1-202ENST00000461056 LGR6Q9HBX8 967 aa10.87□□□□□ -0.67
SND1-202ENST00000461056 PLSCR1O15162 318 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms