RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 BCL9O00512 1426 aa14.89□□□□□ -0.03
APTX-209ENST00000460940 DIAPH1O60610 1272 aaKnown RBP14.89□□□□□ -0.03
APTX-209ENST00000460940 TATP17735 454 aaPredicted RBP14.89□□□□□ -0.03
APTX-209ENST00000460940 FAM196AQ6ZSG2 479 aa14.89□□□□□ -0.03
APTX-209ENST00000460940 KDRP35968 1356 aa14.88□□□□□ -0.03
APTX-209ENST00000460940 CCDC125Q86Z20 511 aa14.87□□□□□ -0.03
APTX-209ENST00000460940 PKD1L3Q7Z443 1732 aa14.87□□□□□ -0.03
APTX-209ENST00000460940 MYBBP1AQ9BQG0 1328 aaKnown RBP14.87□□□□□ -0.03
APTX-209ENST00000460940 MARCH10Q8NA82 808 aaPredicted RBP14.86□□□□□ -0.03
APTX-209ENST00000460940 ZCRB1Q8TBF4 217 aaKnown RBP14.86□□□□□ -0.03
APTX-209ENST00000460940 UPF1Q92900 1129 aaKnown RBP eCLIP14.86□□□□□ -0.03
APTX-209ENST00000460940 EP400Q96L91 3159 aa14.86□□□□□ -0.03
APTX-209ENST00000460940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.86□□□□□ -0.031e-6■□□□□ 10.8
APTX-209ENST00000460940 PCDH11XQ9BZA7 1347 aa14.85□□□□□ -0.03
APTX-209ENST00000460940 PCDH11YQ9BZA8 1340 aa14.85□□□□□ -0.03
APTX-209ENST00000460940 PRKRIP1Q9H875 184 aaPredicted RBP14.85□□□□□ -0.03
APTX-209ENST00000460940 SHANK3Q9BYB0 1731 aa14.85□□□□□ -0.03
APTX-209ENST00000460940 FAM182BQ5T319 152 aa14.84□□□□□ -0.03
APTX-209ENST00000460940 NUDCQ9Y266 331 aa14.84□□□□□ -0.03
APTX-209ENST00000460940 SULT6B1Q6IMI4 303 aa14.84□□□□□ -0.03
APTX-209ENST00000460940 SPG7Q9UQ90 795 aa14.84□□□□□ -0.03
APTX-209ENST00000460940 AEBP1Q8IUX7 1158 aa14.82□□□□□ -0.04
APTX-209ENST00000460940 U2SURPO15042 1029 aaKnown RBP14.82□□□□□ -0.04
APTX-209ENST00000460940 SF3B2Q13435 895 aaKnown RBP14.82□□□□□ -0.04
APTX-209ENST00000460940 AMOTQ4VCS5 1084 aa14.82□□□□□ -0.04
APTX-209ENST00000460940 DDX54Q8TDD1 881 aaKnown RBP14.82□□□□□ -0.04
APTX-209ENST00000460940 TNS1Q9HBL0 1735 aaKnown RBP14.81□□□□□ -0.04
APTX-209ENST00000460940 PLEKHO1Q53GL0 409 aaPredicted RBP14.8□□□□□ -0.04
APTX-209ENST00000460940 NHSQ6T4R5 1651 aa14.8□□□□□ -0.04
APTX-209ENST00000460940 ANP32CO43423 234 aa14.79□□□□□ -0.04
APTX-209ENST00000460940 TRIM37O94972 964 aa14.79□□□□□ -0.04
APTX-209ENST00000460940 HMOX1P09601 288 aa14.79□□□□□ -0.04
APTX-209ENST00000460940 SBF2Q86WG5 1849 aa14.79□□□□□ -0.04
APTX-209ENST00000460940 CYP27B1O15528 508 aa14.78□□□□□ -0.04
APTX-209ENST00000460940 BCL11BQ9C0K0 894 aaPredicted RBP14.78□□□□□ -0.04
APTX-209ENST00000460940 U2AF1L5P0DN76 240 aaPredicted RBP14.78□□□□□ -0.04
APTX-209ENST00000460940 U2AF1Q01081 240 aaKnown RBP eCLIP14.78□□□□□ -0.042e-8■■■■■ 37
APTX-209ENST00000460940 IFNL2Q8IZJ0 200 aa14.78□□□□□ -0.04
APTX-209ENST00000460940 BAG6P46379 1132 aa14.77□□□□□ -0.05
APTX-209ENST00000460940 NKX1-1Q15270 411 aaPredicted RBP14.77□□□□□ -0.05
APTX-209ENST00000460940 HSP90AB1P08238 724 aaKnown RBP14.76□□□□□ -0.05
APTX-209ENST00000460940 PHKG2P15735 406 aa14.76□□□□□ -0.05
APTX-209ENST00000460940 ZNF530Q6P9A1 599 aaPredicted RBP14.76□□□□□ -0.05
APTX-209ENST00000460940 DOT1LQ8TEK3 1739 aa14.76□□□□□ -0.05
APTX-209ENST00000460940 FCHSD2O94868 740 aa14.76□□□□□ -0.05
APTX-209ENST00000460940 RSPH6AQ9H0K4 717 aa14.76□□□□□ -0.05
APTX-209ENST00000460940 RGPD3A6NKT7 1758 aaPredicted RBP14.75□□□□□ -0.05
APTX-209ENST00000460940 RGPD4Q7Z3J3 1758 aa14.75□□□□□ -0.05
APTX-209ENST00000460940 C1orf141Q5JVX7 400 aa14.75□□□□□ -0.05
APTX-209ENST00000460940 APBA3O96018 575 aa14.74□□□□□ -0.05
APTX-209ENST00000460940 PRKAR2BP31323 418 aa14.74□□□□□ -0.05
APTX-209ENST00000460940 ACSBG1Q96GR2 724 aa14.74□□□□□ -0.05
APTX-209ENST00000460940 PNNQ9H307 717 aaKnown RBP14.74□□□□□ -0.05
APTX-209ENST00000460940 GAS2L2Q8NHY3 880 aa14.73□□□□□ -0.05
APTX-209ENST00000460940 DCAF5Q96JK2 942 aa14.73□□□□□ -0.05
APTX-209ENST00000460940 TOGARAM1Q9Y4F4 1720 aa14.73□□□□□ -0.05
APTX-209ENST00000460940 KCNQ2O43526 872 aa14.72□□□□□ -0.05
APTX-209ENST00000460940 AKAP4Q5JQC9 854 aa14.72□□□□□ -0.05
APTX-209ENST00000460940 PRIM1P49642 420 aaKnown RBP14.72□□□□□ -0.05
APTX-209ENST00000460940 BTAF1O14981 1849 aa14.71□□□□□ -0.05
APTX-209ENST00000460940 PLSCR1O15162 318 aa14.71□□□□□ -0.05
APTX-209ENST00000460940 NEFMP07197 916 aa14.71□□□□□ -0.05
APTX-209ENST00000460940 WDR43Q15061 677 aaKnown RBP eCLIP14.71□□□□□ -0.05
APTX-209ENST00000460940 MTHFSDQ2M296 383 aaKnown RBP14.71□□□□□ -0.05
APTX-209ENST00000460940 DEFB132Q7Z7B7 95 aa14.71□□□□□ -0.05
APTX-209ENST00000460940 SYTL4Q96C24 671 aaPredicted RBP14.71□□□□□ -0.05
APTX-209ENST00000460940 KDM6AO15550 1401 aaPredicted RBP14.71□□□□□ -0.06
APTX-209ENST00000460940 ERVV-2B6SEH9 535 aa14.7□□□□□ -0.06
APTX-209ENST00000460940 PTF1AQ7RTS3 328 aa14.7□□□□□ -0.06
APTX-209ENST00000460940 EN1Q05925 392 aaPredicted RBP14.69□□□□□ -0.06
APTX-209ENST00000460940 CAMKK2Q96RR4 588 aa14.69□□□□□ -0.06
APTX-209ENST00000460940 MAP3K5Q99683 1374 aa14.69□□□□□ -0.06
APTX-209ENST00000460940 RREB1Q92766 1687 aa14.68□□□□□ -0.06
APTX-209ENST00000460940 ADAMTS7Q9UKP4 1686 aa14.68□□□□□ -0.06
APTX-209ENST00000460940 PHACTR3Q96KR7 559 aa14.68□□□□□ -0.06
APTX-209ENST00000460940 YTHDC1Q96MU7 727 aaKnown RBP14.68□□□□□ -0.06
APTX-209ENST00000460940 MRC1P22897 1456 aa14.68□□□□□ -0.06
APTX-209ENST00000460940 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
APTX-209ENST00000460940 PLEKHF1Q96S99 279 aa14.67□□□□□ -0.06
APTX-209ENST00000460940 TMOD3Q9NYL9 352 aa14.67□□□□□ -0.06
APTX-209ENST00000460940 ITGB4P16144 1822 aa14.67□□□□□ -0.06
APTX-209ENST00000460940 KAT6BQ8WYB5 2073 aa14.67□□□□□ -0.06
APTX-209ENST00000460940 MPRIPQ6WCQ1 1025 aa14.67□□□□□ -0.06
APTX-209ENST00000460940 SCN11AQ9UI33 1791 aa14.66□□□□□ -0.06
APTX-209ENST00000460940 GNAT3A8MTJ3 354 aa14.66□□□□□ -0.06
APTX-209ENST00000460940 EZH2Q15910 746 aaKnown RBP14.66□□□□□ -0.06
APTX-209ENST00000460940 TSHZ2Q9NRE2 1034 aa14.66□□□□□ -0.06
APTX-209ENST00000460940 PIGBQ92521 554 aa14.65□□□□□ -0.06
APTX-209ENST00000460940 SMARCC1Q92922 1105 aaPredicted RBP14.65□□□□□ -0.06
APTX-209ENST00000460940 MRS2Q9HD23 443 aa14.65□□□□□ -0.06
APTX-209ENST00000460940 RNMTO43148 476 aaKnown RBP14.65□□□□□ -0.06
APTX-209ENST00000460940 CABP4P57796 275 aa14.65□□□□□ -0.06
APTX-209ENST00000460940 MIER1Q8N108 512 aa14.65□□□□□ -0.06
APTX-209ENST00000460940 NUP188Q5SRE5 1749 aa14.64□□□□□ -0.07
APTX-209ENST00000460940 HTATSF1O43719 755 aaKnown RBP14.64□□□□□ -0.07
APTX-209ENST00000460940 SLC27A3Q5K4L6 730 aa14.64□□□□□ -0.07
APTX-209ENST00000460940 SUPT16HQ9Y5B9 1047 aaKnown RBP14.64□□□□□ -0.07
APTX-209ENST00000460940 PALLDQ8WX93 1383 aa14.64□□□□□ -0.07
APTX-209ENST00000460940 NFE2L2Q16236 605 aa14.63□□□□□ -0.07
APTX-209ENST00000460940 TXNRD1Q16881 649 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms