RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 PAPPAQ13219 1627 aa16.35■□□□□ 0.21
SOX2-OT-201ENST00000460739 CGNL1Q0VF96 1302 aa16.35■□□□□ 0.21
SOX2-OT-201ENST00000460739 ZCRB1Q8TBF4 217 aaKnown RBP16.34■□□□□ 0.21
SOX2-OT-201ENST00000460739 SPON1Q9HCB6 807 aa16.33■□□□□ 0.2
SOX2-OT-201ENST00000460739 EMILIN1Q9Y6C2 1016 aa16.33■□□□□ 0.2
SOX2-OT-201ENST00000460739 LY75O60449 1722 aa16.32■□□□□ 0.2
SOX2-OT-201ENST00000460739 USHBP1Q8N6Y0 703 aa16.32■□□□□ 0.2
SOX2-OT-201ENST00000460739 POLR3GLQ9BT43 218 aa16.32■□□□□ 0.2
SOX2-OT-201ENST00000460739 PKD1L3Q7Z443 1732 aa16.31■□□□□ 0.2
SOX2-OT-201ENST00000460739 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
SOX2-OT-201ENST00000460739 SLC15A2Q16348 729 aa16.31■□□□□ 0.2
SOX2-OT-201ENST00000460739 RAPGEF4Q8WZA2 1011 aa16.31■□□□□ 0.2
SOX2-OT-201ENST00000460739 STK32BQ9NY57 414 aa16.31■□□□□ 0.2
SOX2-OT-201ENST00000460739 TATP17735 454 aaPredicted RBP16.3■□□□□ 0.2
SOX2-OT-201ENST00000460739 QSER1Q2KHR3 1735 aa16.3■□□□□ 0.2
SOX2-OT-201ENST00000460739 NSD2O96028 1365 aa16.29■□□□□ 0.2
SOX2-OT-201ENST00000460739 WASHC2AQ641Q2 1341 aa16.29■□□□□ 0.2
SOX2-OT-201ENST00000460739 PDGFDQ9GZP0 370 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-201ENST00000460739 PRIM1P49642 420 aaKnown RBP16.28■□□□□ 0.2
SOX2-OT-201ENST00000460739 LRRC4BQ9NT99 713 aa16.28■□□□□ 0.2
SOX2-OT-201ENST00000460739 PPM1GO15355 546 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-201ENST00000460739 SLC27A3Q5K4L6 730 aa16.27■□□□□ 0.2
SOX2-OT-201ENST00000460739 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-201ENST00000460739 PANK3Q9H999 370 aa16.27■□□□□ 0.2
SOX2-OT-201ENST00000460739 POLKQ9UBT6 870 aa16.27■□□□□ 0.2
SOX2-OT-201ENST00000460739 PCDH11XQ9BZA7 1347 aa16.26■□□□□ 0.19
SOX2-OT-201ENST00000460739 PCDH11YQ9BZA8 1340 aa16.26■□□□□ 0.19
SOX2-OT-201ENST00000460739 TOGARAM1Q9Y4F4 1720 aa16.26■□□□□ 0.19
SOX2-OT-201ENST00000460739 ITGB4P16144 1822 aa16.26■□□□□ 0.19
SOX2-OT-201ENST00000460739 TUBGCP6Q96RT7 1819 aa16.25■□□□□ 0.19
SOX2-OT-201ENST00000460739 PPP1R1BQ9UD71 204 aaPredicted RBP16.25■□□□□ 0.19
SOX2-OT-201ENST00000460739 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
SOX2-OT-201ENST00000460739 CYP27B1O15528 508 aa16.23■□□□□ 0.19
SOX2-OT-201ENST00000460739 PTGER2P43116 358 aa16.23■□□□□ 0.19
SOX2-OT-201ENST00000460739 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
SOX2-OT-201ENST00000460739 ZNF827Q17R98 1081 aa16.23■□□□□ 0.19
SOX2-OT-201ENST00000460739 AKT1S1Q96B36 256 aa16.23■□□□□ 0.19
SOX2-OT-201ENST00000460739 EYA1Q99502 592 aa16.23■□□□□ 0.19
SOX2-OT-201ENST00000460739 MTFR1LQ9H019 292 aa16.22■□□□□ 0.19
SOX2-OT-201ENST00000460739 COL24A1Q17RW2 1714 aa16.22■□□□□ 0.19
SOX2-OT-201ENST00000460739 C5P01031 1676 aa16.21■□□□□ 0.19
SOX2-OT-201ENST00000460739 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-201ENST00000460739 TAF1LQ8IZX4 1826 aa16.21■□□□□ 0.19
SOX2-OT-201ENST00000460739 EIF4A2Q14240 407 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-201ENST00000460739 SGIP1Q9BQI5 828 aa16.2■□□□□ 0.18
SOX2-OT-201ENST00000460739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.2■□□□□ 0.18
SOX2-OT-201ENST00000460739 SPG7Q9UQ90 795 aa16.2■□□□□ 0.18
SOX2-OT-201ENST00000460739 PLEKHG2Q9H7P9 1386 aa16.2■□□□□ 0.18
SOX2-OT-201ENST00000460739 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
SOX2-OT-201ENST00000460739 KCNQ4P56696 695 aa16.19■□□□□ 0.18
SOX2-OT-201ENST00000460739 NKX1-1Q15270 411 aaPredicted RBP16.19■□□□□ 0.18
SOX2-OT-201ENST00000460739 MORC1Q86VD1 984 aa16.18■□□□□ 0.18
SOX2-OT-201ENST00000460739 CCNL1Q9UK58 526 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-201ENST00000460739 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
SOX2-OT-201ENST00000460739 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
SOX2-OT-201ENST00000460739 MPRIPQ6WCQ1 1025 aa16.17■□□□□ 0.18
SOX2-OT-201ENST00000460739 PNPLA7Q6ZV29 1317 aa16.17■□□□□ 0.18
SOX2-OT-201ENST00000460739 SLC16A10Q8TF71 515 aa16.16■□□□□ 0.18
SOX2-OT-201ENST00000460739 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
SOX2-OT-201ENST00000460739 PALLDQ8WX93 1383 aa16.15■□□□□ 0.18
SOX2-OT-201ENST00000460739 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
SOX2-OT-201ENST00000460739 PHKG2P15735 406 aa16.14■□□□□ 0.17
SOX2-OT-201ENST00000460739 IFNL2Q8IZJ0 200 aa16.14■□□□□ 0.17
SOX2-OT-201ENST00000460739 HMGB2P26583 209 aaKnown RBP16.13■□□□□ 0.17
SOX2-OT-201ENST00000460739 PIGBQ92521 554 aa16.13■□□□□ 0.17
SOX2-OT-201ENST00000460739 SMARCC1Q92922 1105 aaPredicted RBP16.13■□□□□ 0.17
SOX2-OT-201ENST00000460739 FHDC1Q9C0D6 1143 aaPredicted RBP16.13■□□□□ 0.17
SOX2-OT-201ENST00000460739 C4BP0C0L5 1744 aa16.13■□□□□ 0.17
SOX2-OT-201ENST00000460739 PER1O15534 1290 aaPredicted RBP16.12■□□□□ 0.17
SOX2-OT-201ENST00000460739 ARXQ96QS3 562 aa16.12■□□□□ 0.17
SOX2-OT-201ENST00000460739 SYT17Q9BSW7 474 aa16.12■□□□□ 0.17
SOX2-OT-201ENST00000460739 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
SOX2-OT-201ENST00000460739 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
SOX2-OT-201ENST00000460739 UBR3Q6ZT12 1888 aa16.1■□□□□ 0.17
SOX2-OT-201ENST00000460739 TMOD3Q9NYL9 352 aa16.1■□□□□ 0.17
SOX2-OT-201ENST00000460739 ZNF831Q5JPB2 1677 aa16.09■□□□□ 0.17
SOX2-OT-201ENST00000460739 PLEKHO1Q53GL0 409 aaPredicted RBP16.09■□□□□ 0.17
SOX2-OT-201ENST00000460739 COL23A1Q86Y22 540 aaPredicted RBP16.09■□□□□ 0.17
SOX2-OT-201ENST00000460739 KDRP35968 1356 aa16.09■□□□□ 0.17
SOX2-OT-201ENST00000460739 POLD1P28340 1107 aa16.08■□□□□ 0.16
SOX2-OT-201ENST00000460739 IL13P35225 146 aa16.08■□□□□ 0.16
SOX2-OT-201ENST00000460739 AMOTQ4VCS5 1084 aa16.08■□□□□ 0.16
SOX2-OT-201ENST00000460739 HSP90AB1P08238 724 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-201ENST00000460739 AEBP1Q8IUX7 1158 aa16.07■□□□□ 0.16
SOX2-OT-201ENST00000460739 FLAD1Q8NFF5 587 aa16.07■□□□□ 0.16
SOX2-OT-201ENST00000460739 DCAF5Q96JK2 942 aa16.07■□□□□ 0.16
SOX2-OT-201ENST00000460739 KDM6AO15550 1401 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-201ENST00000460739 NPC1L1Q9UHC9 1359 aa16.06■□□□□ 0.16
SOX2-OT-201ENST00000460739 LOC102724428A0A0B4J2F2 783 aa16.06■□□□□ 0.16
SOX2-OT-201ENST00000460739 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
SOX2-OT-201ENST00000460739 SIK1P57059 783 aa16.06■□□□□ 0.16
SOX2-OT-201ENST00000460739 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
SOX2-OT-201ENST00000460739 ASAP1Q9ULH1 1129 aa16.06■□□□□ 0.16
SOX2-OT-201ENST00000460739 SCN11AQ9UI33 1791 aa16.05■□□□□ 0.16
SOX2-OT-201ENST00000460739 MSH5O43196 834 aa16.05■□□□□ 0.16
SOX2-OT-201ENST00000460739 MTHFSP49914 203 aa16.05■□□□□ 0.16
SOX2-OT-201ENST00000460739 ZNF530Q6P9A1 599 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-201ENST00000460739 ATG3Q9NT62 314 aa16.05■□□□□ 0.16
SOX2-OT-201ENST00000460739 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-201ENST00000460739 VIRMAQ69YN4 1812 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms