RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 TTC37Q6PGP7 1564 aa8.72□□□□□ -1.01
PTPN12-209ENST00000460731 MIA2Q96PC5 1412 aa8.71□□□□□ -1.01
PTPN12-209ENST00000460731 SUPT6HQ7KZ85 1726 aaKnown RBP8.71□□□□□ -1.01
PTPN12-209ENST00000460731 NEO1Q92859 1461 aa8.71□□□□□ -1.01
PTPN12-209ENST00000460731 EFCAB2Q5VUJ9 269 aa8.71□□□□□ -1.02
PTPN12-209ENST00000460731 PPRC1Q5VV67 1664 aaKnown RBP8.71□□□□□ -1.02
PTPN12-209ENST00000460731 CCNB3Q8WWL7 1395 aa8.71□□□□□ -1.02
PTPN12-209ENST00000460731 KIAA1107Q9UPP5 1409 aa8.71□□□□□ -1.02
PTPN12-209ENST00000460731 KRT76Q01546 638 aa8.7□□□□□ -1.02
PTPN12-209ENST00000460731 KCTD17Q8N5Z5 321 aa8.7□□□□□ -1.02
PTPN12-209ENST00000460731 MEIOBQ8N635 442 aa8.7□□□□□ -1.02
PTPN12-209ENST00000460731 SOS2Q07890 1332 aaPredicted RBP8.7□□□□□ -1.02
PTPN12-209ENST00000460731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.7□□□□□ -1.021e-7■■□□□ 12.2
PTPN12-209ENST00000460731 MYOM3Q5VTT5 1437 aa8.7□□□□□ -1.02
PTPN12-209ENST00000460731 TEX14Q8IWB6 1497 aa8.7□□□□□ -1.02
PTPN12-209ENST00000460731 CDC42BPAQ5VT25 1732 aa8.69□□□□□ -1.02
PTPN12-209ENST00000460731 CDC42BPBQ9Y5S2 1711 aa8.69□□□□□ -1.02
PTPN12-209ENST00000460731 CFAP99D6REC4 459 aa8.69□□□□□ -1.02
PTPN12-209ENST00000460731 AMHR2Q16671 573 aa8.69□□□□□ -1.02
PTPN12-209ENST00000460731 C6orf118Q5T5N4 469 aa8.69□□□□□ -1.02
PTPN12-209ENST00000460731 MAP10Q9P2G4 905 aa8.69□□□□□ -1.02
PTPN12-209ENST00000460731 CFDP1Q9UEE9 299 aaPredicted RBP8.69□□□□□ -1.02
PTPN12-209ENST00000460731 CTHP32929 405 aa8.68□□□□□ -1.02
PTPN12-209ENST00000460731 RSBN1LQ6PCB5 846 aaPredicted RBP8.68□□□□□ -1.02
PTPN12-209ENST00000460731 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
PTPN12-209ENST00000460731 DNMT3LQ9UJW3 386 aa8.68□□□□□ -1.02
PTPN12-209ENST00000460731 AKNAQ7Z591 1439 aa8.68□□□□□ -1.02
PTPN12-209ENST00000460731 FANCAO15360 1455 aa8.68□□□□□ -1.02
PTPN12-209ENST00000460731 PREX2Q70Z35 1606 aa8.68□□□□□ -1.02
PTPN12-209ENST00000460731 TCOF1Q13428 1488 aaKnown RBP8.67□□□□□ -1.02
PTPN12-209ENST00000460731 FGD6Q6ZV73 1430 aa8.67□□□□□ -1.02
PTPN12-209ENST00000460731 GPR161Q8N6U8 529 aaKnown RBP8.67□□□□□ -1.02
PTPN12-209ENST00000460731 C1QTNF2Q9BXJ5 285 aa8.67□□□□□ -1.02
PTPN12-209ENST00000460731 MYO5CQ9NQX4 1742 aa8.67□□□□□ -1.02
PTPN12-209ENST00000460731 MBD5Q9P267 1494 aa8.67□□□□□ -1.02
PTPN12-209ENST00000460731 RRBP1Q9P2E9 1410 aaKnown RBP8.67□□□□□ -1.02
PTPN12-209ENST00000460731 COL17A1Q9UMD9 1497 aaPredicted RBP8.67□□□□□ -1.02
PTPN12-209ENST00000460731 PCDHB15Q9Y5E8 787 aa8.67□□□□□ -1.02
PTPN12-209ENST00000460731 PLEKHH2Q8IVE3 1493 aa8.66□□□□□ -1.02
PTPN12-209ENST00000460731 SPTLC1O15269 473 aa8.66□□□□□ -1.02
PTPN12-209ENST00000460731 ARID5BQ14865 1188 aa8.66□□□□□ -1.02
PTPN12-209ENST00000460731 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
PTPN12-209ENST00000460731 ARHGEF12Q9NZN5 1544 aa8.65□□□□□ -1.02
PTPN12-209ENST00000460731 ZNF644Q9H582 1327 aaPredicted RBP8.65□□□□□ -1.02
PTPN12-209ENST00000460731 BMP2P12643 396 aa8.65□□□□□ -1.02
PTPN12-209ENST00000460731 RASSF7Q02833 373 aa8.65□□□□□ -1.02
PTPN12-209ENST00000460731 GIGYF2Q6Y7W6 1299 aaKnown RBP8.65□□□□□ -1.02
PTPN12-209ENST00000460731 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.65□□□□□ -1.02
PTPN12-209ENST00000460731 TMEM151AQ8N4L1 468 aa8.65□□□□□ -1.02
PTPN12-209ENST00000460731 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
PTPN12-209ENST00000460731 ITSN2Q9NZM3 1697 aa8.65□□□□□ -1.03
PTPN12-209ENST00000460731 ARHGAP5Q13017 1502 aa8.64□□□□□ -1.03
PTPN12-209ENST00000460731 HRCP23327 699 aa8.64□□□□□ -1.03
PTPN12-209ENST00000460731 BARGINQ6ZT62 677 aa8.64□□□□□ -1.03
PTPN12-209ENST00000460731 SH3RF1Q7Z6J0 888 aa8.64□□□□□ -1.03
PTPN12-209ENST00000460731 BPHLQ86WA6 291 aaPredicted RBP8.64□□□□□ -1.03
PTPN12-209ENST00000460731 PPARGC1BQ86YN6 1023 aaKnown RBP8.64□□□□□ -1.03
PTPN12-209ENST00000460731 ADAMTS8Q9UP79 889 aa8.64□□□□□ -1.03
PTPN12-209ENST00000460731 SAMD9LQ8IVG5 1584 aa8.64□□□□□ -1.03
PTPN12-209ENST00000460731 CFAP74Q9C0B2 1584 aa8.64□□□□□ -1.03
PTPN12-209ENST00000460731 SCAPERQ9BY12 1400 aa8.63□□□□□ -1.03
PTPN12-209ENST00000460731 GDF11O95390 407 aa8.63□□□□□ -1.03
PTPN12-209ENST00000460731 TTLL12Q14166 644 aaPredicted RBP8.63□□□□□ -1.03
PTPN12-209ENST00000460731 PRPF38BQ5VTL8 546 aaKnown RBP8.63□□□□□ -1.03
PTPN12-209ENST00000460731 MAP4K5Q9Y4K4 846 aa8.63□□□□□ -1.03
PTPN12-209ENST00000460731 TSPOAP1O95153 1857 aa8.63□□□□□ -1.03
PTPN12-209ENST00000460731 ABCC1P33527 1531 aa8.63□□□□□ -1.03
PTPN12-209ENST00000460731 ADGRL1O94910 1474 aa8.63□□□□□ -1.03
PTPN12-209ENST00000460731 ARHGEF5Q12774 1597 aa8.62□□□□□ -1.03
PTPN12-209ENST00000460731 PER1O15534 1290 aaPredicted RBP8.62□□□□□ -1.03
PTPN12-209ENST00000460731 UPP2O95045 317 aa8.62□□□□□ -1.03
PTPN12-209ENST00000460731 DIXDC1Q155Q3 683 aa8.62□□□□□ -1.03
PTPN12-209ENST00000460731 NANOS1Q8WY41 292 aaKnown RBP8.62□□□□□ -1.03
PTPN12-209ENST00000460731 ZBTB3Q9H5J0 574 aa8.62□□□□□ -1.03
PTPN12-209ENST00000460731 DENND4BO75064 1496 aaPredicted RBP8.62□□□□□ -1.03
PTPN12-209ENST00000460731 CAMSAP2Q08AD1 1489 aa8.62□□□□□ -1.03
PTPN12-209ENST00000460731 POGZQ7Z3K3 1410 aa8.62□□□□□ -1.03
PTPN12-209ENST00000460731 TRAPPC8Q9Y2L5 1435 aa8.62□□□□□ -1.03
PTPN12-209ENST00000460731 HNRNPMP52272 730 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTPN12-209ENST00000460731 HAP1P54257 671 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-209ENST00000460731 TRMT44Q8IYL2 757 aaKnown RBP8.61□□□□□ -1.03
PTPN12-209ENST00000460731 AFAP1Q8N556 730 aa8.61□□□□□ -1.03
PTPN12-209ENST00000460731 TSEN34Q9BSV6 310 aaKnown RBP8.61□□□□□ -1.03
PTPN12-209ENST00000460731 MLH3Q9UHC1 1453 aa8.61□□□□□ -1.03
PTPN12-209ENST00000460731 RTEL1-TNFRSF6BF6WH68 1400 aa8.61□□□□□ -1.03
PTPN12-209ENST00000460731 ABCC5O15440 1437 aa8.61□□□□□ -1.03
PTPN12-209ENST00000460731 PTPN23Q9H3S7 1636 aa8.61□□□□□ -1.03
PTPN12-209ENST00000460731 KDM5CP41229 1560 aa8.61□□□□□ -1.03
PTPN12-209ENST00000460731 ZNF518AQ6AHZ1 1483 aa8.6□□□□□ -1.03
PTPN12-209ENST00000460731 MAGI2Q86UL8 1455 aa8.6□□□□□ -1.03
PTPN12-209ENST00000460731 ZMYND10O75800 440 aa8.6□□□□□ -1.03
PTPN12-209ENST00000460731 RAPGEF3O95398 923 aa8.6□□□□□ -1.03
PTPN12-209ENST00000460731 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.6□□□□□ -1.03
PTPN12-209ENST00000460731 CNTNAP3BQ96NU0 1288 aa8.6□□□□□ -1.03
PTPN12-209ENST00000460731 CNTNAP3Q9BZ76 1288 aa8.6□□□□□ -1.03
PTPN12-209ENST00000460731 ZMYM4Q5VZL5 1548 aa8.59□□□□□ -1.03
PTPN12-209ENST00000460731 PTSQ03393 145 aa8.59□□□□□ -1.03
PTPN12-209ENST00000460731 AGERQ15109 404 aa8.59□□□□□ -1.03
PTPN12-209ENST00000460731 SH3BP5LQ7L8J4 393 aa8.59□□□□□ -1.03
PTPN12-209ENST00000460731 ZNF777Q9ULD5 760 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms