RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 EMILIN1Q9Y6C2 1016 aa7.53□□□□□ -1.2
ATRX-204ENST00000460639 LILRA1O75019 489 aa7.52□□□□□ -1.21
ATRX-204ENST00000460639 TIMP2P16035 220 aa7.52□□□□□ -1.21
ATRX-204ENST00000460639 ADD1P35611 737 aaKnown RBP7.52□□□□□ -1.21
ATRX-204ENST00000460639 PLEKHM2Q8IWE5 1019 aa7.52□□□□□ -1.21
ATRX-204ENST00000460639 KLF16Q9BXK1 252 aaPredicted RBP7.52□□□□□ -1.21
ATRX-204ENST00000460639 PGPEP1Q9NXJ5 209 aa7.52□□□□□ -1.21
ATRX-204ENST00000460639 MYCP01106 439 aaPredicted RBP7.51□□□□□ -1.21
ATRX-204ENST00000460639 ERVK-9P63128 1117 aa7.51□□□□□ -1.21
ATRX-204ENST00000460639 MYT1Q01538 1121 aa7.51□□□□□ -1.21
ATRX-204ENST00000460639 LAPTM4AQ15012 233 aa7.51□□□□□ -1.21
ATRX-204ENST00000460639 KANK4Q5T7N3 995 aaPredicted RBP7.51□□□□□ -1.21
ATRX-204ENST00000460639 CC2D2BQ6DHV5 1058 aa7.51□□□□□ -1.21
ATRX-204ENST00000460639 AGBL1Q96MI9 1066 aa7.51□□□□□ -1.21
ATRX-204ENST00000460639 ESF1Q9H501 851 aaKnown RBP7.51□□□□□ -1.21
ATRX-204ENST00000460639 NRG2O14511 850 aaPredicted RBP7.5□□□□□ -1.21
ATRX-204ENST00000460639 GTF2IP78347 998 aa7.5□□□□□ -1.21
ATRX-204ENST00000460639 PSME1Q06323 249 aa7.5□□□□□ -1.21
ATRX-204ENST00000460639 PKDCCQ504Y2 493 aa7.5□□□□□ -1.21
ATRX-204ENST00000460639 PBXIP1Q96AQ6 731 aa7.5□□□□□ -1.21
ATRX-204ENST00000460639 ZNF594Q96JF6 807 aaPredicted RBP7.5□□□□□ -1.21
ATRX-204ENST00000460639 OSBPL3Q9H4L5 887 aa7.5□□□□□ -1.21
ATRX-204ENST00000460639 VRTNQ9H8Y1 702 aa7.5□□□□□ -1.21
ATRX-204ENST00000460639 NOD1Q9Y239 953 aa7.5□□□□□ -1.21
ATRX-204ENST00000460639 RASA1P20936 1047 aa7.49□□□□□ -1.21
ATRX-204ENST00000460639 SRPK2P78362 688 aaKnown RBP7.49□□□□□ -1.21
ATRX-204ENST00000460639 CLDN10P78369 228 aa7.49□□□□□ -1.21
ATRX-204ENST00000460639 USP4Q13107 963 aa7.49□□□□□ -1.21
ATRX-204ENST00000460639 OGFOD1Q8N543 542 aa7.49□□□□□ -1.21
ATRX-204ENST00000460639 IRX2Q9BZI1 471 aaPredicted RBP7.49□□□□□ -1.21
ATRX-204ENST00000460639 KIAA1024Q9UPX6 916 aa7.49□□□□□ -1.21
ATRX-204ENST00000460639 CAPN5O15484 640 aaPredicted RBP7.48□□□□□ -1.21
ATRX-204ENST00000460639 MFAP1P55081 439 aaKnown RBP7.48□□□□□ -1.21
ATRX-204ENST00000460639 RELBQ01201 579 aa7.48□□□□□ -1.21
ATRX-204ENST00000460639 CRTC2Q53ET0 693 aaPredicted RBP7.48□□□□□ -1.21
ATRX-204ENST00000460639 RAB6BQ9NRW1 208 aa7.48□□□□□ -1.21
ATRX-204ENST00000460639 ATP5J2-PTCD1G3V325 749 aa7.47□□□□□ -1.21
ATRX-204ENST00000460639 ST8SIA5O15466 376 aa7.47□□□□□ -1.21
ATRX-204ENST00000460639 BMP1P13497 986 aa7.47□□□□□ -1.21
ATRX-204ENST00000460639 CCDC125Q86Z20 511 aa7.47□□□□□ -1.21
ATRX-204ENST00000460639 AEBP1Q8IUX7 1158 aa7.47□□□□□ -1.21
ATRX-204ENST00000460639 ZNF395Q9H8N7 513 aaPredicted RBP7.47□□□□□ -1.21
ATRX-204ENST00000460639 DNAAF2Q9NVR5 837 aaKnown RBP7.47□□□□□ -1.21
ATRX-204ENST00000460639 PCDHGA11Q9Y5H2 935 aa7.47□□□□□ -1.21
ATRX-204ENST00000460639 USP17L15C9J2P7 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L10C9JJH3 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L13C9JLJ4 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L12C9JPN9 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L11C9JVI0 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L21D6R901 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L18D6R9N7 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L22D6RA61 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L17D6RBQ6 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L19D6RCP7 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L20D6RJB6 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 LZTS3O60299 673 aaPredicted RBP7.46□□□□□ -1.22
ATRX-204ENST00000460639 LGR5O75473 907 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 ADH1AP07327 375 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 USP17L24Q0WX57 530 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 LARP1Q6PKG0 1096 aaKnown RBP7.46□□□□□ -1.22
ATRX-204ENST00000460639 TPCN2Q8NHX9 752 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 GZF1Q9H116 711 aaPredicted RBP7.46□□□□□ -1.22
ATRX-204ENST00000460639 ARHGEF10LQ9HCE6 1279 aa7.46□□□□□ -1.22
ATRX-204ENST00000460639 CARNS1A5YM72 827 aa7.45□□□□□ -1.22
ATRX-204ENST00000460639 ZBTB7BO15156 539 aaPredicted RBP7.45□□□□□ -1.22
ATRX-204ENST00000460639 DGAT1O75907 488 aa7.45□□□□□ -1.22
ATRX-204ENST00000460639 C6orf118Q5T5N4 469 aa7.45□□□□□ -1.22
ATRX-204ENST00000460639 CYP2U1Q7Z449 544 aa7.45□□□□□ -1.22
ATRX-204ENST00000460639 TRIM50Q86XT4 487 aa7.45□□□□□ -1.22
ATRX-204ENST00000460639 KDF1Q8NAX2 398 aaPredicted RBP7.45□□□□□ -1.22
ATRX-204ENST00000460639 RETREG2Q8NC44 543 aa7.45□□□□□ -1.22
ATRX-204ENST00000460639 SIRT1Q96EB6 747 aa7.45□□□□□ -1.22
ATRX-204ENST00000460639 SFI1A8K8P3 1242 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 AVPP01185 164 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 DPYDQ12882 1025 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 PTK7Q13308 1070 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 CCDC102BQ68D86 513 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 Q6ZVU0 165 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 MEIOBQ8N635 442 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.44□□□□□ -1.22
ATRX-204ENST00000460639 STK32AQ8WU08 396 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 SERTAD1Q9UHV2 236 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 DACH1Q9UI36 760 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 ZMIZ1Q9ULJ6 1067 aa7.44□□□□□ -1.22
ATRX-204ENST00000460639 NOVA2Q9UNW9 492 aaKnown RBP7.44□□□□□ -1.22
ATRX-204ENST00000460639 MEN1O00255 615 aa7.43□□□□□ -1.22
ATRX-204ENST00000460639 AXIN1O15169 862 aa7.43□□□□□ -1.22
ATRX-204ENST00000460639 SCNN1DP51172 638 aa7.43□□□□□ -1.22
ATRX-204ENST00000460639 ETNK1Q9HBU6 452 aa7.43□□□□□ -1.22
ATRX-204ENST00000460639 A0A1W2PRU2 124 aa7.42□□□□□ -1.22
ATRX-204ENST00000460639 FAM196BA6NMK8 535 aa7.42□□□□□ -1.22
ATRX-204ENST00000460639 PPP1R15AO75807 674 aaPredicted RBP7.42□□□□□ -1.22
ATRX-204ENST00000460639 ATG7O95352 703 aa7.42□□□□□ -1.22
ATRX-204ENST00000460639 PTGIRP43119 386 aa7.42□□□□□ -1.22
ATRX-204ENST00000460639 RBM25P49756 843 aaKnown RBP7.42□□□□□ -1.22
ATRX-204ENST00000460639 GDF10P55107 478 aa7.42□□□□□ -1.22
ATRX-204ENST00000460639 TMCO4Q5TGY1 634 aa7.42□□□□□ -1.22
ATRX-204ENST00000460639 TRIM46Q7Z4K8 759 aa7.42□□□□□ -1.22
ATRX-204ENST00000460639 ANKMY2Q8IV38 441 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms