RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 DDX54Q8TDD1 881 aaKnown RBP15.98■□□□□ 0.15
LSG1-204ENST00000460584 INSRP06213 1382 aa15.98■□□□□ 0.15
LSG1-204ENST00000460584 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
LSG1-204ENST00000460584 SHANK3Q9BYB0 1731 aa15.97■□□□□ 0.15
LSG1-204ENST00000460584 NBPF6Q5VWK0 638 aa15.97■□□□□ 0.15
LSG1-204ENST00000460584 LTV1Q96GA3 475 aaPredicted RBP15.97■□□□□ 0.15
LSG1-204ENST00000460584 NBPF4Q96M43 638 aa15.97■□□□□ 0.15
LSG1-204ENST00000460584 FHDC1Q9C0D6 1143 aaPredicted RBP15.97■□□□□ 0.15
LSG1-204ENST00000460584 PRIM1P49642 420 aaKnown RBP15.96■□□□□ 0.15
LSG1-204ENST00000460584 ARXQ96QS3 562 aa15.96■□□□□ 0.15
LSG1-204ENST00000460584 GGNBP2Q9H3C7 697 aa15.96■□□□□ 0.15
LSG1-204ENST00000460584 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
LSG1-204ENST00000460584 NCAPD2Q15021 1401 aa15.95■□□□□ 0.14
LSG1-204ENST00000460584 RRS1Q15050 365 aaKnown RBP15.95■□□□□ 0.14
LSG1-204ENST00000460584 FLT4P35916 1363 aa15.95■□□□□ 0.14
LSG1-204ENST00000460584 PNPLA7Q6ZV29 1317 aa15.94■□□□□ 0.14
LSG1-204ENST00000460584 LY75O60449 1722 aa15.94■□□□□ 0.14
LSG1-204ENST00000460584 HMGB2P26583 209 aaKnown RBP15.94■□□□□ 0.14
LSG1-204ENST00000460584 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
LSG1-204ENST00000460584 CARD14Q9BXL6 1004 aa15.93■□□□□ 0.14
LSG1-204ENST00000460584 HSP90AB2PQ58FF8 381 aa15.92■□□□□ 0.14
LSG1-204ENST00000460584 RAPGEF4Q8WZA2 1011 aa15.92■□□□□ 0.14
LSG1-204ENST00000460584 DOT1LQ8TEK3 1739 aa15.91■□□□□ 0.14
LSG1-204ENST00000460584 RGPD2P0DJD1 1756 aa15.91■□□□□ 0.14
LSG1-204ENST00000460584 TATP17735 454 aaPredicted RBP15.9■□□□□ 0.14
LSG1-204ENST00000460584 PCDH11XQ9BZA7 1347 aa15.9■□□□□ 0.14
LSG1-204ENST00000460584 PCDH11YQ9BZA8 1340 aa15.9■□□□□ 0.14
LSG1-204ENST00000460584 PLEKHG2Q9H7P9 1386 aa15.89■□□□□ 0.13
LSG1-204ENST00000460584 UTRNP46939 3433 aa15.89■□□□□ 0.13
LSG1-204ENST00000460584 NKX1-1Q15270 411 aaPredicted RBP15.89■□□□□ 0.13
LSG1-204ENST00000460584 SYTL4Q96C24 671 aaPredicted RBP15.89■□□□□ 0.13
LSG1-204ENST00000460584 TFCP2L1Q9NZI6 479 aa15.89■□□□□ 0.13
LSG1-204ENST00000460584 KAT6BQ8WYB5 2073 aa15.89■□□□□ 0.13
LSG1-204ENST00000460584 CYP27B1O15528 508 aa15.88■□□□□ 0.13
LSG1-204ENST00000460584 POLD1P28340 1107 aa15.88■□□□□ 0.13
LSG1-204ENST00000460584 CCNL1Q9UK58 526 aaPredicted RBP15.88■□□□□ 0.13
LSG1-204ENST00000460584 KIF20BQ96Q89 1820 aa15.88■□□□□ 0.13
LSG1-204ENST00000460584 WASHC2AQ641Q2 1341 aa15.88■□□□□ 0.13
LSG1-204ENST00000460584 NSD3Q9BZ95 1437 aa15.87■□□□□ 0.13
LSG1-204ENST00000460584 USHBP1Q8N6Y0 703 aa15.87■□□□□ 0.13
LSG1-204ENST00000460584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.87■□□□□ 0.13
LSG1-204ENST00000460584 ANKRD26Q9UPS8 1709 aa15.87■□□□□ 0.13
LSG1-204ENST00000460584 ZNF784Q8NCA9 323 aaPredicted RBP15.86■□□□□ 0.13
LSG1-204ENST00000460584 TUBGCP6Q96RT7 1819 aa15.85■□□□□ 0.13
LSG1-204ENST00000460584 KCNQ4P56696 695 aa15.85■□□□□ 0.13
LSG1-204ENST00000460584 EMILIN1Q9Y6C2 1016 aa15.85■□□□□ 0.13
LSG1-204ENST00000460584 PKD1L3Q7Z443 1732 aa15.85■□□□□ 0.13
LSG1-204ENST00000460584 COL23A1Q86Y22 540 aaPredicted RBP15.84■□□□□ 0.13
LSG1-204ENST00000460584 FLAD1Q8NFF5 587 aa15.84■□□□□ 0.13
LSG1-204ENST00000460584 SMARCC1Q92922 1105 aaPredicted RBP15.83■□□□□ 0.12
LSG1-204ENST00000460584 PALLDQ8WX93 1383 aa15.83■□□□□ 0.12
LSG1-204ENST00000460584 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
LSG1-204ENST00000460584 CHD4Q14839 1912 aa15.82■□□□□ 0.12
LSG1-204ENST00000460584 EYA1Q99502 592 aa15.81■□□□□ 0.12
LSG1-204ENST00000460584 TOGARAM1Q9Y4F4 1720 aa15.8■□□□□ 0.12
LSG1-204ENST00000460584 PIGBQ92521 554 aa15.8■□□□□ 0.12
LSG1-204ENST00000460584 SPG7Q9UQ90 795 aa15.8■□□□□ 0.12
LSG1-204ENST00000460584 C5P01031 1676 aa15.79■□□□□ 0.12
LSG1-204ENST00000460584 MPRIPQ6WCQ1 1025 aa15.79■□□□□ 0.12
LSG1-204ENST00000460584 CD2APQ9Y5K6 639 aa15.79■□□□□ 0.12
LSG1-204ENST00000460584 GPR162Q16538 588 aa15.78■□□□□ 0.12
LSG1-204ENST00000460584 TAF1LQ8IZX4 1826 aa15.78■□□□□ 0.12
LSG1-204ENST00000460584 NLGN2Q8NFZ4 835 aa15.77■□□□□ 0.12
LSG1-204ENST00000460584 MAP2P11137 1827 aaKnown RBP15.77■□□□□ 0.11
LSG1-204ENST00000460584 ITGB4P16144 1822 aa15.76■□□□□ 0.11
LSG1-204ENST00000460584 GRIN3BO60391 1043 aa15.76■□□□□ 0.11
LSG1-204ENST00000460584 PHKG2P15735 406 aa15.76■□□□□ 0.11
LSG1-204ENST00000460584 IFNL2Q8IZJ0 200 aa15.76■□□□□ 0.11
LSG1-204ENST00000460584 IGSF1Q8N6C5 1336 aa15.75■□□□□ 0.11
LSG1-204ENST00000460584 C4BP0C0L5 1744 aa15.75■□□□□ 0.11
LSG1-204ENST00000460584 SSFA2P28290 1259 aa15.75■□□□□ 0.11
LSG1-204ENST00000460584 EIF4A2Q14240 407 aaKnown RBP15.75■□□□□ 0.11
LSG1-204ENST00000460584 LOC102724428A0A0B4J2F2 783 aa15.74■□□□□ 0.11
LSG1-204ENST00000460584 SIK1P57059 783 aa15.74■□□□□ 0.11
LSG1-204ENST00000460584 EIF4G2P78344 907 aaKnown RBP eCLIP15.74■□□□□ 0.116e-6■■■■□ 25.1
LSG1-204ENST00000460584 PPM1GO15355 546 aaPredicted RBP15.73■□□□□ 0.11
LSG1-204ENST00000460584 YBX3P16989 372 aaKnown RBP eCLIP15.73■□□□□ 0.114e-6■□□□□ 11.2
LSG1-204ENST00000460584 AMIGO3Q86WK7 504 aa15.73■□□□□ 0.11
LSG1-204ENST00000460584 UBR3Q6ZT12 1888 aa15.72■□□□□ 0.11
LSG1-204ENST00000460584 AK7Q96M32 723 aa15.72■□□□□ 0.11
LSG1-204ENST00000460584 TMOD3Q9NYL9 352 aa15.72■□□□□ 0.11
LSG1-204ENST00000460584 KDRP35968 1356 aa15.72■□□□□ 0.11
LSG1-204ENST00000460584 ZNF831Q5JPB2 1677 aa15.71■□□□□ 0.11
LSG1-204ENST00000460584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.71■□□□□ 0.11
LSG1-204ENST00000460584 ERVV-2B6SEH9 535 aa15.71■□□□□ 0.11
LSG1-204ENST00000460584 MSH5O43196 834 aa15.71■□□□□ 0.11
LSG1-204ENST00000460584 C1QTNF8P60827 252 aa15.71■□□□□ 0.11
LSG1-204ENST00000460584 LINC00116Q8NCU8 138 aa15.71■□□□□ 0.11
LSG1-204ENST00000460584 ATG3Q9NT62 314 aa15.71■□□□□ 0.11
LSG1-204ENST00000460584 ASAP1Q9ULH1 1129 aa15.71■□□□□ 0.11
LSG1-204ENST00000460584 HSP90AB1P08238 724 aaKnown RBP15.7■□□□□ 0.1
LSG1-204ENST00000460584 HSPA5P11021 654 aaKnown RBP15.7■□□□□ 0.1
LSG1-204ENST00000460584 ITPK1Q13572 414 aa15.7■□□□□ 0.1
LSG1-204ENST00000460584 MSL1Q68DK7 614 aa15.7■□□□□ 0.1
LSG1-204ENST00000460584 KLHL34Q8N239 644 aa15.7■□□□□ 0.1
LSG1-204ENST00000460584 PANK3Q9H999 370 aa15.7■□□□□ 0.1
LSG1-204ENST00000460584 AMOTQ4VCS5 1084 aa15.69■□□□□ 0.1
LSG1-204ENST00000460584 DCAF5Q96JK2 942 aa15.69■□□□□ 0.1
LSG1-204ENST00000460584 GOLGB1Q14789 3259 aaKnown RBP15.68■□□□□ 0.1
LSG1-204ENST00000460584 RC3H1Q5TC82 1133 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms