RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 CRB1P82279 1406 aa22.37■■□□□ 1.17
CDK11A-209ENST00000460465 RTF1Q92541 710 aaKnown RBP22.37■■□□□ 1.17
CDK11A-209ENST00000460465 ERBB3P21860 1342 aa22.36■■□□□ 1.17
CDK11A-209ENST00000460465 FAM208AQ9UK61 1670 aaKnown RBP22.35■■□□□ 1.17
CDK11A-209ENST00000460465 ROBO1Q9Y6N7 1651 aa22.35■■□□□ 1.17
CDK11A-209ENST00000460465 SMC4Q9NTJ3 1288 aa22.35■■□□□ 1.17
CDK11A-209ENST00000460465 CPDO75976 1380 aa22.35■■□□□ 1.17
CDK11A-209ENST00000460465 PDE3AQ14432 1141 aa22.35■■□□□ 1.17
CDK11A-209ENST00000460465 KIAA0232Q92628 1395 aa22.34■■□□□ 1.17
CDK11A-209ENST00000460465 MAP3K5Q99683 1374 aa22.34■■□□□ 1.17
CDK11A-209ENST00000460465 GNAT3A8MTJ3 354 aa22.34■■□□□ 1.17
CDK11A-209ENST00000460465 HTATSF1O43719 755 aaKnown RBP22.34■■□□□ 1.17
CDK11A-209ENST00000460465 SSH1Q8WYL5 1049 aa22.34■■□□□ 1.17
CDK11A-209ENST00000460465 CHRNA2Q15822 529 aa22.33■■□□□ 1.17
CDK11A-209ENST00000460465 CHL1O00533 1208 aa22.32■■□□□ 1.16
CDK11A-209ENST00000460465 TSPYL6Q8N831 410 aa22.32■■□□□ 1.16
CDK11A-209ENST00000460465 PANK1Q8TE04 598 aa22.31■■□□□ 1.16
CDK11A-209ENST00000460465 VAMP4O75379 141 aa22.31■■□□□ 1.16
CDK11A-209ENST00000460465 ALDH1L2Q3SY69 923 aa22.31■■□□□ 1.16
CDK11A-209ENST00000460465 VIRMAQ69YN4 1812 aaKnown RBP22.31■■□□□ 1.16
CDK11A-209ENST00000460465 ZNF428Q96B54 188 aa22.3■■□□□ 1.16
CDK11A-209ENST00000460465 TNNQ9UQP3 1299 aa22.3■■□□□ 1.16
CDK11A-209ENST00000460465 C8orf58Q8NAV2 365 aa22.3■■□□□ 1.16
CDK11A-209ENST00000460465 ELL2O00472 640 aaPredicted RBP22.29■■□□□ 1.16
CDK11A-209ENST00000460465 TWISTNBQ3B726 338 aaPredicted RBP22.29■■□□□ 1.16
CDK11A-209ENST00000460465 ZKSCAN2Q63HK3 967 aa22.29■■□□□ 1.16
CDK11A-209ENST00000460465 PLEKHO1Q53GL0 409 aaPredicted RBP22.28■■□□□ 1.16
CDK11A-209ENST00000460465 AHDC1Q5TGY3 1603 aaPredicted RBP22.27■■□□□ 1.16
CDK11A-209ENST00000460465 HAP1P54257 671 aaPredicted RBP22.27■■□□□ 1.16
CDK11A-209ENST00000460465 IL17REQ8NFR9 667 aa22.27■■□□□ 1.16
CDK11A-209ENST00000460465 NLRP2Q9NX02 1062 aa22.27■■□□□ 1.16
CDK11A-209ENST00000460465 COG6Q9Y2V7 657 aa22.27■■□□□ 1.16
CDK11A-209ENST00000460465 RLBP1P12271 317 aa22.26■■□□□ 1.15
CDK11A-209ENST00000460465 CSB-PGBD3P0DP91 1061 aa22.26■■□□□ 1.15
CDK11A-209ENST00000460465 AMOTQ4VCS5 1084 aa22.26■■□□□ 1.15
CDK11A-209ENST00000460465 MIS18AQ9NYP9 233 aa22.26■■□□□ 1.15
CDK11A-209ENST00000460465 KIF16BQ96L93 1317 aa22.26■■□□□ 1.15
CDK11A-209ENST00000460465 CLUAP1Q96AJ1 413 aa22.25■■□□□ 1.15
CDK11A-209ENST00000460465 PRDM11Q9NQV5 511 aa22.25■■□□□ 1.15
CDK11A-209ENST00000460465 TSPYL4Q9UJ04 414 aa22.25■■□□□ 1.15
CDK11A-209ENST00000460465 NOB1Q9ULX3 412 aaKnown RBP22.25■■□□□ 1.15
CDK11A-209ENST00000460465 ZNF530Q6P9A1 599 aaPredicted RBP22.25■■□□□ 1.15
CDK11A-209ENST00000460465 KRT24Q2M2I5 525 aa22.24■■□□□ 1.15
CDK11A-209ENST00000460465 BRPF1P55201 1214 aaPredicted RBP22.23■■□□□ 1.15
CDK11A-209ENST00000460465 AKAP4Q5JQC9 854 aa22.23■■□□□ 1.15
CDK11A-209ENST00000460465 CEMIPQ8WUJ3 1361 aa22.23■■□□□ 1.15
CDK11A-209ENST00000460465 TRIM27P14373 513 aa22.23■■□□□ 1.15
CDK11A-209ENST00000460465 ATF7IPQ6VMQ6 1270 aa22.23■■□□□ 1.15
CDK11A-209ENST00000460465 DZIP1LQ8IYY4 767 aaKnown RBP22.23■■□□□ 1.15
CDK11A-209ENST00000460465 MRPL50Q8N5N7 158 aaKnown RBP22.23■■□□□ 1.15
CDK11A-209ENST00000460465 MS4A1P11836 297 aa22.22■■□□□ 1.15
CDK11A-209ENST00000460465 FTSJ3Q8IY81 847 aaKnown RBP22.22■■□□□ 1.15
CDK11A-209ENST00000460465 MEGF6O75095 1541 aa22.2■■□□□ 1.15
CDK11A-209ENST00000460465 TCERG1O14776 1098 aaKnown RBP22.2■■□□□ 1.15
CDK11A-209ENST00000460465 IPO8O15397 1037 aaKnown RBP22.2■■□□□ 1.15
CDK11A-209ENST00000460465 RAPGEF4Q8WZA2 1011 aa22.2■■□□□ 1.15
CDK11A-209ENST00000460465 C1orf141Q5JVX7 400 aa22.2■■□□□ 1.14
CDK11A-209ENST00000460465 COL5A2P05997 1499 aaPredicted RBP22.19■■□□□ 1.14
CDK11A-209ENST00000460465 COL22A1Q8NFW1 1626 aaPredicted RBP22.19■■□□□ 1.14
CDK11A-209ENST00000460465 TAF7Q15545 349 aaPredicted RBP22.19■■□□□ 1.14
CDK11A-209ENST00000460465 LGR6Q9HBX8 967 aa22.19■■□□□ 1.14
CDK11A-209ENST00000460465 KDM3BQ7LBC6 1761 aa22.19■■□□□ 1.14
CDK11A-209ENST00000460465 PHLPP1O60346 1717 aa22.19■■□□□ 1.14
CDK11A-209ENST00000460465 PKD1L3Q7Z443 1732 aa22.18■■□□□ 1.14
CDK11A-209ENST00000460465 MVPQ14764 893 aaKnown RBP22.18■■□□□ 1.14
CDK11A-209ENST00000460465 ADAMTS7Q9UKP4 1686 aa22.18■■□□□ 1.14
CDK11A-209ENST00000460465 TATP17735 454 aaPredicted RBP22.18■■□□□ 1.14
CDK11A-209ENST00000460465 BABAM1Q9NWV8 329 aa22.18■■□□□ 1.14
CDK11A-209ENST00000460465 MPRIPQ6WCQ1 1025 aa22.17■■□□□ 1.14
CDK11A-209ENST00000460465 WDR17Q8IZU2 1322 aa22.17■■□□□ 1.14
CDK11A-209ENST00000460465 OVOS2A0A0G2JMS6 1433 aa22.16■■□□□ 1.14
CDK11A-209ENST00000460465 SIPA1L3O60292 1781 aaPredicted RBP22.16■■□□□ 1.14
CDK11A-209ENST00000460465 PARP4Q9UKK3 1724 aaKnown RBP22.16■■□□□ 1.14
CDK11A-209ENST00000460465 SCN11AQ9UI33 1791 aa22.15■■□□□ 1.14
CDK11A-209ENST00000460465 RNMTO43148 476 aaKnown RBP22.15■■□□□ 1.14
CDK11A-209ENST00000460465 KDM2BQ8NHM5 1336 aa22.15■■□□□ 1.14
CDK11A-209ENST00000460465 COL16A1Q07092 1604 aaPredicted RBP22.15■■□□□ 1.14
CDK11A-209ENST00000460465 PLEKHG2Q9H7P9 1386 aa22.15■■□□□ 1.14
CDK11A-209ENST00000460465 ARHGAP45Q92619 1136 aa22.14■■□□□ 1.14
CDK11A-209ENST00000460465 AAMPQ13685 434 aa22.14■■□□□ 1.13
CDK11A-209ENST00000460465 TMEM57Q8N5G2 664 aa22.13■■□□□ 1.13
CDK11A-209ENST00000460465 SPG7Q9UQ90 795 aa22.13■■□□□ 1.13
CDK11A-209ENST00000460465 TEFQ10587 303 aa22.13■■□□□ 1.13
CDK11A-209ENST00000460465 TOM1L2Q6ZVM7 507 aa22.13■■□□□ 1.13
CDK11A-209ENST00000460465 ITPRIPQ8IWB1 547 aa22.13■■□□□ 1.13
CDK11A-209ENST00000460465 TSHZ2Q9NRE2 1034 aa22.13■■□□□ 1.13
CDK11A-209ENST00000460465 COL14A1Q05707 1796 aaKnown RBP22.12■■□□□ 1.13
CDK11A-209ENST00000460465 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.12■■□□□ 1.13
CDK11A-209ENST00000460465 CENPQQ7L2Z9 268 aaPredicted RBP22.11■■□□□ 1.13
CDK11A-209ENST00000460465 DDX19BQ9UMR2 479 aa22.11■■□□□ 1.13
CDK11A-209ENST00000460465 STRN4Q9NRL3 753 aa22.1■■□□□ 1.13
CDK11A-209ENST00000460465 TOM1O60784 492 aa22.09■■□□□ 1.13
CDK11A-209ENST00000460465 PHKG2P15735 406 aa22.09■■□□□ 1.13
CDK11A-209ENST00000460465 KDM6AO15550 1401 aaPredicted RBP22.08■■□□□ 1.13
CDK11A-209ENST00000460465 ABCC4O15439 1325 aa22.08■■□□□ 1.13
CDK11A-209ENST00000460465 EVA1CP58658 441 aa22.08■■□□□ 1.13
CDK11A-209ENST00000460465 API5Q9BZZ5 524 aaKnown RBP22.08■■□□□ 1.13
CDK11A-209ENST00000460465 SOS1Q07889 1333 aaPredicted RBP22.08■■□□□ 1.12
CDK11A-209ENST00000460465 BTBD11A6QL63 1104 aa22.08■■□□□ 1.12
CDK11A-209ENST00000460465 PIP4K2BP78356 416 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms