RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 ANKRD36BQ8N2N9 1353 aa30.43■■■□□ 2.46
PDE6B-203ENST00000460119 KAT6BQ8WYB5 2073 aa30.43■■■□□ 2.46
PDE6B-203ENST00000460119 NSD2O96028 1365 aa30.42■■■□□ 2.46
PDE6B-203ENST00000460119 MEGF6O75095 1541 aa30.42■■■□□ 2.46
PDE6B-203ENST00000460119 SLC24A1O60721 1099 aa30.41■■■□□ 2.46
PDE6B-203ENST00000460119 SLC16A10Q8TF71 515 aa30.41■■■□□ 2.46
PDE6B-203ENST00000460119 TMF1P82094 1093 aa30.4■■■□□ 2.46
PDE6B-203ENST00000460119 GPR162Q16538 588 aa30.4■■■□□ 2.46
PDE6B-203ENST00000460119 HSP90AB2PQ58FF8 381 aa30.4■■■□□ 2.46
PDE6B-203ENST00000460119 CCNL1Q9UK58 526 aaPredicted RBP30.4■■■□□ 2.46
PDE6B-203ENST00000460119 POLD1P28340 1107 aa30.38■■■□□ 2.45
PDE6B-203ENST00000460119 PELP1Q8IZL8 1130 aaKnown RBP30.36■■■□□ 2.45
PDE6B-203ENST00000460119 RAPGEF4Q8WZA2 1011 aa30.36■■■□□ 2.45
PDE6B-203ENST00000460119 MSH5O43196 834 aa30.35■■■□□ 2.45
PDE6B-203ENST00000460119 MAP3K5Q99683 1374 aa30.35■■■□□ 2.45
PDE6B-203ENST00000460119 USP47Q96K76 1375 aa30.34■■■□□ 2.45
PDE6B-203ENST00000460119 TATP17735 454 aaPredicted RBP30.34■■■□□ 2.45
PDE6B-203ENST00000460119 COL23A1Q86Y22 540 aaPredicted RBP30.34■■■□□ 2.45
PDE6B-203ENST00000460119 NLGN2Q8NFZ4 835 aa30.34■■■□□ 2.45
PDE6B-203ENST00000460119 CARD14Q9BXL6 1004 aa30.34■■■□□ 2.45
PDE6B-203ENST00000460119 FAM208AQ9UK61 1670 aaKnown RBP30.33■■■□□ 2.45
PDE6B-203ENST00000460119 RTL1A6NKG5 1358 aa30.32■■■□□ 2.44
PDE6B-203ENST00000460119 MSL1Q68DK7 614 aa30.29■■■□□ 2.44
PDE6B-203ENST00000460119 MPRIPQ6WCQ1 1025 aa30.28■■■□□ 2.44
PDE6B-203ENST00000460119 EMILIN1Q9Y6C2 1016 aa30.28■■■□□ 2.44
PDE6B-203ENST00000460119 RGPD2P0DJD1 1756 aa30.28■■■□□ 2.44
PDE6B-203ENST00000460119 INSRP06213 1382 aa30.28■■■□□ 2.44
PDE6B-203ENST00000460119 CGNL1Q0VF96 1302 aa30.27■■■□□ 2.44
PDE6B-203ENST00000460119 CYP27B1O15528 508 aa30.27■■■□□ 2.44
PDE6B-203ENST00000460119 SMG6Q86US8 1419 aaKnown RBP30.24■■■□□ 2.43
PDE6B-203ENST00000460119 PPM1GO15355 546 aaPredicted RBP30.24■■■□□ 2.43
PDE6B-203ENST00000460119 DOT1LQ8TEK3 1739 aa30.23■■■□□ 2.43
PDE6B-203ENST00000460119 SMIM5Q71RC9 77 aa30.23■■■□□ 2.43
PDE6B-203ENST00000460119 CDCA8Q53HL2 280 aa30.22■■■□□ 2.43
PDE6B-203ENST00000460119 PCDH11XQ9BZA7 1347 aa30.22■■■□□ 2.43
PDE6B-203ENST00000460119 PCDH11YQ9BZA8 1340 aa30.22■■■□□ 2.43
PDE6B-203ENST00000460119 FLT4P35916 1363 aa30.21■■■□□ 2.43
PDE6B-203ENST00000460119 TRIM26Q12899 539 aaPredicted RBP30.21■■■□□ 2.43
PDE6B-203ENST00000460119 SHANK3Q9BYB0 1731 aa30.2■■■□□ 2.43
PDE6B-203ENST00000460119 YBX3P16989 372 aaKnown RBP eCLIP30.2■■■□□ 2.43
PDE6B-203ENST00000460119 PALLDQ8WX93 1383 aa30.19■■■□□ 2.42
PDE6B-203ENST00000460119 C1QTNF8P60827 252 aa30.19■■■□□ 2.42
PDE6B-203ENST00000460119 AMIGO3Q86WK7 504 aa30.18■■■□□ 2.42
PDE6B-203ENST00000460119 NSD3Q9BZ95 1437 aa30.17■■■□□ 2.42
PDE6B-203ENST00000460119 PIGBQ92521 554 aa30.17■■■□□ 2.42
PDE6B-203ENST00000460119 UTRNP46939 3433 aa30.16■■■□□ 2.42
PDE6B-203ENST00000460119 LY75O60449 1722 aa30.15■■■□□ 2.42
PDE6B-203ENST00000460119 SENP3-EIF4A1A0A087X0R7 540 aa30.14■■■□□ 2.42
PDE6B-203ENST00000460119 EYA1Q99502 592 aa30.13■■■□□ 2.41
PDE6B-203ENST00000460119 POLR3GLQ9BT43 218 aa30.13■■■□□ 2.41
PDE6B-203ENST00000460119 KIF24Q5T7B8 1368 aa30.13■■■□□ 2.41
PDE6B-203ENST00000460119 TUBGCP6Q96RT7 1819 aa30.12■■■□□ 2.41
PDE6B-203ENST00000460119 QSER1Q2KHR3 1735 aa30.11■■■□□ 2.41
PDE6B-203ENST00000460119 SMARCC1Q92922 1105 aaPredicted RBP30.11■■■□□ 2.41
PDE6B-203ENST00000460119 PHF14O94880 888 aa30.1■■■□□ 2.41
PDE6B-203ENST00000460119 NKX1-1Q15270 411 aaPredicted RBP30.1■■■□□ 2.41
PDE6B-203ENST00000460119 FLAD1Q8NFF5 587 aa30.1■■■□□ 2.41
PDE6B-203ENST00000460119 WASHC2AQ641Q2 1341 aa30.1■■■□□ 2.41
PDE6B-203ENST00000460119 GRIN3BO60391 1043 aa30.09■■■□□ 2.41
PDE6B-203ENST00000460119 TNNT2P45379 298 aaPredicted RBP30.09■■■□□ 2.41
PDE6B-203ENST00000460119 AK7Q96M32 723 aa30.09■■■□□ 2.41
PDE6B-203ENST00000460119 POLKQ9UBT6 870 aa30.09■■■□□ 2.41
PDE6B-203ENST00000460119 SPG7Q9UQ90 795 aa30.09■■■□□ 2.41
PDE6B-203ENST00000460119 COL24A1Q17RW2 1714 aa30.08■■■□□ 2.41
PDE6B-203ENST00000460119 LINC00116Q8NCU8 138 aa30.06■■■□□ 2.4
PDE6B-203ENST00000460119 WWC3Q9ULE0 1092 aa30.06■■■□□ 2.4
PDE6B-203ENST00000460119 ASAP1Q9ULH1 1129 aa30.06■■■□□ 2.4
PDE6B-203ENST00000460119 CD2APQ9Y5K6 639 aa30.06■■■□□ 2.4
PDE6B-203ENST00000460119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.05■■■□□ 2.4
PDE6B-203ENST00000460119 GIGYF1O75420 1035 aaPredicted RBP30.05■■■□□ 2.4
PDE6B-203ENST00000460119 CHD4Q14839 1912 aa30.04■■■□□ 2.4
PDE6B-203ENST00000460119 LOC102724428A0A0B4J2F2 783 aa30.04■■■□□ 2.4
PDE6B-203ENST00000460119 SIK1P57059 783 aa30.04■■■□□ 2.4
PDE6B-203ENST00000460119 ITPK1Q13572 414 aa30.02■■■□□ 2.4
PDE6B-203ENST00000460119 TMOD3Q9NYL9 352 aa30.02■■■□□ 2.4
PDE6B-203ENST00000460119 PHKG2P15735 406 aa30.01■■■□□ 2.39
PDE6B-203ENST00000460119 EIF4A2Q14240 407 aaKnown RBP30.01■■■□□ 2.39
PDE6B-203ENST00000460119 NCAPD2Q15021 1401 aa30.01■■■□□ 2.39
PDE6B-203ENST00000460119 HMGB2P26583 209 aaKnown RBP30■■■□□ 2.39
PDE6B-203ENST00000460119 PCGF6Q9BYE7 350 aa30■■■□□ 2.39
PDE6B-203ENST00000460119 KIF20BQ96Q89 1820 aa29.99■■■□□ 2.39
PDE6B-203ENST00000460119 IFNL2Q8IZJ0 200 aa29.99■■■□□ 2.39
PDE6B-203ENST00000460119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.99■■■□□ 2.39
PDE6B-203ENST00000460119 ATP6V1AP38606 617 aa29.98■■■□□ 2.39
PDE6B-203ENST00000460119 ATG3Q9NT62 314 aa29.98■■■□□ 2.39
PDE6B-203ENST00000460119 TIMELESSQ9UNS1 1208 aa29.97■■■□□ 2.39
PDE6B-203ENST00000460119 TOGARAM1Q9Y4F4 1720 aa29.96■■■□□ 2.39
PDE6B-203ENST00000460119 C5P01031 1676 aa29.96■■■□□ 2.39
PDE6B-203ENST00000460119 GNPATO15228 680 aa29.96■■■□□ 2.39
PDE6B-203ENST00000460119 SSFA2P28290 1259 aa29.94■■■□□ 2.38
PDE6B-203ENST00000460119 C4BP0C0L5 1744 aa29.93■■■□□ 2.38
PDE6B-203ENST00000460119 PANK3Q9H999 370 aa29.92■■■□□ 2.38
PDE6B-203ENST00000460119 IGSF1Q8N6C5 1336 aa29.92■■■□□ 2.38
PDE6B-203ENST00000460119 ATP10DQ9P241 1426 aa29.91■■■□□ 2.38
PDE6B-203ENST00000460119 SLC4A9Q96Q91 983 aa29.91■■■□□ 2.38
PDE6B-203ENST00000460119 ZNF526Q8TF50 670 aaPredicted RBP29.9■■■□□ 2.38
PDE6B-203ENST00000460119 RBM42Q9BTD8 480 aaKnown RBP29.89■■■□□ 2.38
PDE6B-203ENST00000460119 PKD1L3Q7Z443 1732 aa29.88■■■□□ 2.37
PDE6B-203ENST00000460119 HSPA5P11021 654 aaKnown RBP29.88■■■□□ 2.37
PDE6B-203ENST00000460119 ITGB4P16144 1822 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms