RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 ACSBG1Q96GR2 724 aa17.22■□□□□ 0.35
C4A-244ENST00000460060 USP31Q70CQ4 1352 aa17.22■□□□□ 0.35
C4A-244ENST00000460060 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.35
C4A-244ENST00000460060 ZNF784Q8NCA9 323 aaPredicted RBP17.21■□□□□ 0.35
C4A-244ENST00000460060 MON2Q7Z3U7 1717 aa17.21■□□□□ 0.35
C4A-244ENST00000460060 ERBB3P21860 1342 aa17.21■□□□□ 0.34
C4A-244ENST00000460060 NHSQ6T4R5 1651 aa17.2■□□□□ 0.34
C4A-244ENST00000460060 CHD4Q14839 1912 aa17.2■□□□□ 0.34
C4A-244ENST00000460060 NLRP2Q9NX02 1062 aa17.2■□□□□ 0.34
C4A-244ENST00000460060 IL2RBP14784 551 aa17.19■□□□□ 0.34
C4A-244ENST00000460060 COG3Q96JB2 828 aa17.19■□□□□ 0.34
C4A-244ENST00000460060 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
C4A-244ENST00000460060 ARXQ96QS3 562 aa17.17■□□□□ 0.34
C4A-244ENST00000460060 USP54Q70EL1 1684 aa17.16■□□□□ 0.34
C4A-244ENST00000460060 TNNT2P45379 298 aaPredicted RBP17.16■□□□□ 0.34
C4A-244ENST00000460060 ANKRD24Q8TF21 1146 aa17.16■□□□□ 0.34
C4A-244ENST00000460060 PAPPAQ13219 1627 aa17.16■□□□□ 0.34
C4A-244ENST00000460060 BTAF1O14981 1849 aa17.16■□□□□ 0.34
C4A-244ENST00000460060 LTN1O94822 1766 aa17.15■□□□□ 0.34
C4A-244ENST00000460060 ZNF827Q17R98 1081 aa17.15■□□□□ 0.34
C4A-244ENST00000460060 LRRC4BQ9NT99 713 aa17.15■□□□□ 0.34
C4A-244ENST00000460060 MAP3K5Q99683 1374 aa17.14■□□□□ 0.33
C4A-244ENST00000460060 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
C4A-244ENST00000460060 CCDC184Q52MB2 194 aa17.12■□□□□ 0.33
C4A-244ENST00000460060 SLC16A10Q8TF71 515 aa17.12■□□□□ 0.33
C4A-244ENST00000460060 AKT1S1Q96B36 256 aa17.12■□□□□ 0.33
C4A-244ENST00000460060 KIF20BQ96Q89 1820 aa17.1■□□□□ 0.33
C4A-244ENST00000460060 SLC27A3Q5K4L6 730 aa17.1■□□□□ 0.33
C4A-244ENST00000460060 IP6K1Q92551 441 aa17.1■□□□□ 0.33
C4A-244ENST00000460060 MTHFSP49914 203 aa17.09■□□□□ 0.33
C4A-244ENST00000460060 DDX54Q8TDD1 881 aaKnown RBP17.09■□□□□ 0.33
C4A-244ENST00000460060 C1QTNF8P60827 252 aa17.08■□□□□ 0.32
C4A-244ENST00000460060 GPR162Q16538 588 aa17.08■□□□□ 0.32
C4A-244ENST00000460060 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
C4A-244ENST00000460060 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
C4A-244ENST00000460060 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
C4A-244ENST00000460060 FBLN1P23142 703 aa17.07■□□□□ 0.32
C4A-244ENST00000460060 CFAP53Q96M91 514 aa17.07■□□□□ 0.32
C4A-244ENST00000460060 COL24A1Q17RW2 1714 aa17.07■□□□□ 0.32
C4A-244ENST00000460060 PNPLA7Q6ZV29 1317 aa17.06■□□□□ 0.32
C4A-244ENST00000460060 POLD1P28340 1107 aa17.06■□□□□ 0.32
C4A-244ENST00000460060 LTV1Q96GA3 475 aaPredicted RBP17.06■□□□□ 0.32
C4A-244ENST00000460060 UTRNP46939 3433 aa17.05■□□□□ 0.32
C4A-244ENST00000460060 PRIM1P49642 420 aaKnown RBP17.05■□□□□ 0.32
C4A-244ENST00000460060 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
C4A-244ENST00000460060 KCNQ4P56696 695 aa17.04■□□□□ 0.32
C4A-244ENST00000460060 RRS1Q15050 365 aaKnown RBP17.04■□□□□ 0.32
C4A-244ENST00000460060 PNISRQ8TF01 805 aaKnown RBP17.04■□□□□ 0.32
C4A-244ENST00000460060 TFCP2L1Q9NZI6 479 aa17.04■□□□□ 0.32
C4A-244ENST00000460060 FAM208AQ9UK61 1670 aaKnown RBP17.04■□□□□ 0.32
C4A-244ENST00000460060 PPM1GO15355 546 aaPredicted RBP17.03■□□□□ 0.32
C4A-244ENST00000460060 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
C4A-244ENST00000460060 SYTL4Q96C24 671 aaPredicted RBP17.03■□□□□ 0.32
C4A-244ENST00000460060 EMILIN1Q9Y6C2 1016 aa17.03■□□□□ 0.32
C4A-244ENST00000460060 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
C4A-244ENST00000460060 MAP3K19Q56UN5 1328 aa17.02■□□□□ 0.32
C4A-244ENST00000460060 HOXC9P31274 260 aa17.02■□□□□ 0.32
C4A-244ENST00000460060 ZCRB1Q8TBF4 217 aaKnown RBP17.02■□□□□ 0.32
C4A-244ENST00000460060 SMG6Q86US8 1419 aaKnown RBP17.02■□□□□ 0.31
C4A-244ENST00000460060 LY75O60449 1722 aa17.01■□□□□ 0.31
C4A-244ENST00000460060 FAM9BQ8IZU0 186 aa17.01■□□□□ 0.31
C4A-244ENST00000460060 INSRP06213 1382 aa17.01■□□□□ 0.31
C4A-244ENST00000460060 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
C4A-244ENST00000460060 AMPHP49418 695 aa17■□□□□ 0.31
C4A-244ENST00000460060 NLGN2Q8NFZ4 835 aa17■□□□□ 0.31
C4A-244ENST00000460060 DOT1LQ8TEK3 1739 aa16.99■□□□□ 0.31
C4A-244ENST00000460060 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
C4A-244ENST00000460060 KIF24Q5T7B8 1368 aa16.99■□□□□ 0.31
C4A-244ENST00000460060 WDR43Q15061 677 aaKnown RBP eCLIP16.98■□□□□ 0.31
C4A-244ENST00000460060 CCNL1Q9UK58 526 aaPredicted RBP16.98■□□□□ 0.31
C4A-244ENST00000460060 SHANK3Q9BYB0 1731 aa16.98■□□□□ 0.31
C4A-244ENST00000460060 DIAPH1O60610 1272 aaKnown RBP16.97■□□□□ 0.31
C4A-244ENST00000460060 COL23A1Q86Y22 540 aaPredicted RBP16.97■□□□□ 0.31
C4A-244ENST00000460060 NUDCQ9Y266 331 aa16.97■□□□□ 0.31
C4A-244ENST00000460060 FLT4P35916 1363 aa16.97■□□□□ 0.31
C4A-244ENST00000460060 MEGF6O75095 1541 aa16.96■□□□□ 0.31
C4A-244ENST00000460060 GIGYF1O75420 1035 aaPredicted RBP16.96■□□□□ 0.31
C4A-244ENST00000460060 HSP90AB2PQ58FF8 381 aa16.96■□□□□ 0.31
C4A-244ENST00000460060 NBPF6Q5VWK0 638 aa16.96■□□□□ 0.31
C4A-244ENST00000460060 NBPF4Q96M43 638 aa16.96■□□□□ 0.31
C4A-244ENST00000460060 COL3A1P02461 1466 aaPredicted RBP16.95■□□□□ 0.3
C4A-244ENST00000460060 RTL1A6NKG5 1358 aa16.95■□□□□ 0.3
C4A-244ENST00000460060 GRIN3BO60391 1043 aa16.95■□□□□ 0.3
C4A-244ENST00000460060 MSH5O43196 834 aa16.94■□□□□ 0.3
C4A-244ENST00000460060 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
C4A-244ENST00000460060 ADAMTS8Q9UP79 889 aa16.94■□□□□ 0.3
C4A-244ENST00000460060 U2SURPO15042 1029 aaKnown RBP16.93■□□□□ 0.3
C4A-244ENST00000460060 IL13P35225 146 aa16.93■□□□□ 0.3
C4A-244ENST00000460060 EIF4A2Q14240 407 aaKnown RBP16.92■□□□□ 0.3
C4A-244ENST00000460060 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
C4A-244ENST00000460060 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.3
C4A-244ENST00000460060 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
C4A-244ENST00000460060 USHBP1Q8N6Y0 703 aa16.91■□□□□ 0.3
C4A-244ENST00000460060 RAPGEF4Q8WZA2 1011 aa16.91■□□□□ 0.3
C4A-244ENST00000460060 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
C4A-244ENST00000460060 HMGB2P26583 209 aaKnown RBP16.9■□□□□ 0.3
C4A-244ENST00000460060 YTHDC1Q96MU7 727 aaKnown RBP16.9■□□□□ 0.3
C4A-244ENST00000460060 FLAD1Q8NFF5 587 aa16.89■□□□□ 0.29
C4A-244ENST00000460060 CD2APQ9Y5K6 639 aa16.89■□□□□ 0.29
C4A-244ENST00000460060 MAP2P11137 1827 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms