RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 DDX54Q8TDD1 881 aaKnown RBP21.44■■□□□ 1.02
SDF4-204ENST00000459994 WASHC2AQ641Q2 1341 aa21.44■■□□□ 1.02
SDF4-204ENST00000459994 TXNRD1Q16881 649 aa21.43■■□□□ 1.02
SDF4-204ENST00000459994 NBPF14Q5TI25 921 aa21.43■■□□□ 1.02
SDF4-204ENST00000459994 PDGFDQ9GZP0 370 aaPredicted RBP21.43■■□□□ 1.02
SDF4-204ENST00000459994 INSRP06213 1382 aa21.43■■□□□ 1.02
SDF4-204ENST00000459994 TUBGCP6Q96RT7 1819 aa21.43■■□□□ 1.02
SDF4-204ENST00000459994 LY75O60449 1722 aa21.42■■□□□ 1.02
SDF4-204ENST00000459994 FLT4P35916 1363 aa21.42■■□□□ 1.02
SDF4-204ENST00000459994 PKD1L3Q7Z443 1732 aa21.41■■□□□ 1.02
SDF4-204ENST00000459994 TOGARAM1Q9Y4F4 1720 aa21.41■■□□□ 1.02
SDF4-204ENST00000459994 ITGB4P16144 1822 aa21.4■■□□□ 1.02
SDF4-204ENST00000459994 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
SDF4-204ENST00000459994 NSD2O96028 1365 aa21.38■■□□□ 1.01
SDF4-204ENST00000459994 KIF24Q5T7B8 1368 aa21.37■■□□□ 1.01
SDF4-204ENST00000459994 CGNL1Q0VF96 1302 aa21.37■■□□□ 1.01
SDF4-204ENST00000459994 ZCRB1Q8TBF4 217 aaKnown RBP21.37■■□□□ 1.01
SDF4-204ENST00000459994 PANK3Q9H999 370 aa21.37■■□□□ 1.01
SDF4-204ENST00000459994 PPM1GO15355 546 aaPredicted RBP21.36■■□□□ 1.01
SDF4-204ENST00000459994 NCAPD2Q15021 1401 aa21.36■■□□□ 1.01
SDF4-204ENST00000459994 TNNT2P45379 298 aaPredicted RBP21.35■■□□□ 1.01
SDF4-204ENST00000459994 LRRC4BQ9NT99 713 aa21.35■■□□□ 1.01
SDF4-204ENST00000459994 POLKQ9UBT6 870 aa21.35■■□□□ 1.01
SDF4-204ENST00000459994 QSER1Q2KHR3 1735 aa21.33■■□□□ 1.01
SDF4-204ENST00000459994 PRIM1P49642 420 aaKnown RBP21.33■■□□□ 1.01
SDF4-204ENST00000459994 KCNQ4P56696 695 aa21.32■■□□□ 1
SDF4-204ENST00000459994 SLC15A2Q16348 729 aa21.32■■□□□ 1
SDF4-204ENST00000459994 TATP17735 454 aaPredicted RBP21.31■■□□□ 1
SDF4-204ENST00000459994 ZNF827Q17R98 1081 aa21.31■■□□□ 1
SDF4-204ENST00000459994 RAPGEF4Q8WZA2 1011 aa21.31■■□□□ 1
SDF4-204ENST00000459994 SYTL4Q96C24 671 aaPredicted RBP21.31■■□□□ 1
SDF4-204ENST00000459994 TAF1LQ8IZX4 1826 aa21.31■■□□□ 1
SDF4-204ENST00000459994 STK32BQ9NY57 414 aa21.3■■□□□ 1
SDF4-204ENST00000459994 ZBTB7AO95365 584 aa21.29■■□□□ 1
SDF4-204ENST00000459994 EYA1Q99502 592 aa21.29■■□□□ 1
SDF4-204ENST00000459994 SPON1Q9HCB6 807 aa21.29■■□□□ 1
SDF4-204ENST00000459994 CYP27B1O15528 508 aa21.28■■□□□ 1
SDF4-204ENST00000459994 DDX10Q13206 875 aaKnown RBP21.28■■□□□ 1
SDF4-204ENST00000459994 C5P01031 1676 aa21.28■■□□□ 1
SDF4-204ENST00000459994 EIF4A2Q14240 407 aaKnown RBP21.26■□□□□ 0.99
SDF4-204ENST00000459994 COL24A1Q17RW2 1714 aa21.25■□□□□ 0.99
SDF4-204ENST00000459994 ATF5Q9Y2D1 282 aaPredicted RBP21.25■□□□□ 0.99
SDF4-204ENST00000459994 PCDH11XQ9BZA7 1347 aa21.25■□□□□ 0.99
SDF4-204ENST00000459994 PCDH11YQ9BZA8 1340 aa21.25■□□□□ 0.99
SDF4-204ENST00000459994 PTGER2P43116 358 aa21.24■□□□□ 0.99
SDF4-204ENST00000459994 AKT1S1Q96B36 256 aa21.23■□□□□ 0.99
SDF4-204ENST00000459994 PPP1R1BQ9UD71 204 aaPredicted RBP21.2■□□□□ 0.98
SDF4-204ENST00000459994 VIRMAQ69YN4 1812 aaKnown RBP21.2■□□□□ 0.98
SDF4-204ENST00000459994 PER1O15534 1290 aaPredicted RBP21.19■□□□□ 0.98
SDF4-204ENST00000459994 AMER1Q5JTC6 1135 aaPredicted RBP21.19■□□□□ 0.98
SDF4-204ENST00000459994 SLC27A3Q5K4L6 730 aa21.19■□□□□ 0.98
SDF4-204ENST00000459994 MORC1Q86VD1 984 aa21.19■□□□□ 0.98
SDF4-204ENST00000459994 SGIP1Q9BQI5 828 aa21.19■□□□□ 0.98
SDF4-204ENST00000459994 MPRIPQ6WCQ1 1025 aa21.18■□□□□ 0.98
SDF4-204ENST00000459994 PNPLA7Q6ZV29 1317 aa21.18■□□□□ 0.98
SDF4-204ENST00000459994 IGSF1Q8N6C5 1336 aa21.18■□□□□ 0.98
SDF4-204ENST00000459994 CCNL1Q9UK58 526 aaPredicted RBP21.17■□□□□ 0.98
SDF4-204ENST00000459994 KNSTRNQ9Y448 316 aa21.17■□□□□ 0.98
SDF4-204ENST00000459994 UBR3Q6ZT12 1888 aa21.16■□□□□ 0.98
SDF4-204ENST00000459994 NKX1-1Q15270 411 aaPredicted RBP21.16■□□□□ 0.98
SDF4-204ENST00000459994 MTFR1LQ9H019 292 aa21.16■□□□□ 0.98
SDF4-204ENST00000459994 C4BP0C0L5 1744 aa21.15■□□□□ 0.98
SDF4-204ENST00000459994 PALLDQ8WX93 1383 aa21.15■□□□□ 0.98
SDF4-204ENST00000459994 AEBP1Q8IUX7 1158 aa21.15■□□□□ 0.98
SDF4-204ENST00000459994 SPG7Q9UQ90 795 aa21.15■□□□□ 0.98
SDF4-204ENST00000459994 PHKG2P15735 406 aa21.14■□□□□ 0.97
SDF4-204ENST00000459994 PIGBQ92521 554 aa21.14■□□□□ 0.97
SDF4-204ENST00000459994 NPC1L1Q9UHC9 1359 aa21.11■□□□□ 0.97
SDF4-204ENST00000459994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.11■□□□□ 0.97
SDF4-204ENST00000459994 TFCP2L1Q9NZI6 479 aa21.11■□□□□ 0.97
SDF4-204ENST00000459994 SCN11AQ9UI33 1791 aa21.1■□□□□ 0.97
SDF4-204ENST00000459994 CC2D1BQ5T0F9 858 aaKnown RBP21.1■□□□□ 0.97
SDF4-204ENST00000459994 AMIGO3Q86WK7 504 aa21.1■□□□□ 0.97
SDF4-204ENST00000459994 FHDC1Q9C0D6 1143 aaPredicted RBP21.1■□□□□ 0.97
SDF4-204ENST00000459994 IL13P35225 146 aa21.09■□□□□ 0.97
SDF4-204ENST00000459994 SMIM5Q71RC9 77 aa21.09■□□□□ 0.97
SDF4-204ENST00000459994 IFNL2Q8IZJ0 200 aa21.09■□□□□ 0.97
SDF4-204ENST00000459994 KDM6AO15550 1401 aaPredicted RBP21.09■□□□□ 0.97
SDF4-204ENST00000459994 CNGB1Q14028 1251 aaPredicted RBP21.08■□□□□ 0.97
SDF4-204ENST00000459994 DIEXFQ68CQ4 756 aaKnown RBP21.08■□□□□ 0.97
SDF4-204ENST00000459994 COL23A1Q86Y22 540 aaPredicted RBP21.08■□□□□ 0.97
SDF4-204ENST00000459994 ASAP1Q9ULH1 1129 aa21.08■□□□□ 0.97
SDF4-204ENST00000459994 COL5A3P25940 1745 aaPredicted RBP21.07■□□□□ 0.96
SDF4-204ENST00000459994 MTHFSP49914 203 aa21.06■□□□□ 0.96
SDF4-204ENST00000459994 SYT17Q9BSW7 474 aa21.06■□□□□ 0.96
SDF4-204ENST00000459994 SULT6B1Q6IMI4 303 aa21.05■□□□□ 0.96
SDF4-204ENST00000459994 ARXQ96QS3 562 aa21.05■□□□□ 0.96
SDF4-204ENST00000459994 TMOD3Q9NYL9 352 aa21.05■□□□□ 0.96
SDF4-204ENST00000459994 KDRP35968 1356 aa21.05■□□□□ 0.96
SDF4-204ENST00000459994 ATG3Q9NT62 314 aa21.04■□□□□ 0.96
SDF4-204ENST00000459994 PLEKHG2Q9H7P9 1386 aa21.04■□□□□ 0.96
SDF4-204ENST00000459994 COL3A1P02461 1466 aaPredicted RBP21.04■□□□□ 0.96
SDF4-204ENST00000459994 ZNF831Q5JPB2 1677 aa21.03■□□□□ 0.96
SDF4-204ENST00000459994 ITPK1Q13572 414 aa21.03■□□□□ 0.96
SDF4-204ENST00000459994 ZNF530Q6P9A1 599 aaPredicted RBP21.03■□□□□ 0.96
SDF4-204ENST00000459994 LINC00116Q8NCU8 138 aa21.03■□□□□ 0.96
SDF4-204ENST00000459994 SLC16A10Q8TF71 515 aa21.03■□□□□ 0.96
SDF4-204ENST00000459994 SMARCC1Q92922 1105 aaPredicted RBP21.03■□□□□ 0.96
SDF4-204ENST00000459994 MYH14Q7Z406 1995 aaKnown RBP21.03■□□□□ 0.96
SDF4-204ENST00000459994 PLEKHO1Q53GL0 409 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms