RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 COG3Q96JB2 828 aa13.84□□□□□ -0.19
SYN3-205ENST00000459990 ITGB4P16144 1822 aa13.84□□□□□ -0.19
SYN3-205ENST00000459990 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
SYN3-205ENST00000459990 MTFR1LQ9H019 292 aa13.83□□□□□ -0.2
SYN3-205ENST00000459990 FYB1O15117 783 aa13.82□□□□□ -0.2
SYN3-205ENST00000459990 KCNQ4P56696 695 aa13.82□□□□□ -0.2
SYN3-205ENST00000459990 DDX54Q8TDD1 881 aaKnown RBP13.82□□□□□ -0.2
SYN3-205ENST00000459990 AKT1S1Q96B36 256 aa13.82□□□□□ -0.2
SYN3-205ENST00000459990 GGNBP2Q9H3C7 697 aa13.82□□□□□ -0.2
SYN3-205ENST00000459990 NBPF6Q5VWK0 638 aa13.81□□□□□ -0.2
SYN3-205ENST00000459990 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
SYN3-205ENST00000459990 NBPF4Q96M43 638 aa13.81□□□□□ -0.2
SYN3-205ENST00000459990 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
SYN3-205ENST00000459990 AMPHP49418 695 aa13.8□□□□□ -0.2
SYN3-205ENST00000459990 SYT17Q9BSW7 474 aa13.8□□□□□ -0.2
SYN3-205ENST00000459990 PNPLA7Q6ZV29 1317 aa13.8□□□□□ -0.2
SYN3-205ENST00000459990 PRIM1P49642 420 aaKnown RBP13.79□□□□□ -0.2
SYN3-205ENST00000459990 MAP3K5Q99683 1374 aa13.79□□□□□ -0.2
SYN3-205ENST00000459990 NCAPD2Q15021 1401 aa13.79□□□□□ -0.2
SYN3-205ENST00000459990 NSD3Q9BZ95 1437 aa13.79□□□□□ -0.2
SYN3-205ENST00000459990 TMF1P82094 1093 aa13.78□□□□□ -0.2
SYN3-205ENST00000459990 CARD14Q9BXL6 1004 aa13.78□□□□□ -0.2
SYN3-205ENST00000459990 INSRP06213 1382 aa13.77□□□□□ -0.21
SYN3-205ENST00000459990 FLT4P35916 1363 aa13.77□□□□□ -0.21
SYN3-205ENST00000459990 HSP90AB2PQ58FF8 381 aa13.77□□□□□ -0.21
SYN3-205ENST00000459990 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
SYN3-205ENST00000459990 SYTL4Q96C24 671 aaPredicted RBP13.77□□□□□ -0.21
SYN3-205ENST00000459990 ARXQ96QS3 562 aa13.77□□□□□ -0.21
SYN3-205ENST00000459990 UBR3Q6ZT12 1888 aa13.76□□□□□ -0.21
SYN3-205ENST00000459990 C4BP0C0L5 1744 aa13.76□□□□□ -0.21
SYN3-205ENST00000459990 SMG6Q86US8 1419 aaKnown RBP13.76□□□□□ -0.21
SYN3-205ENST00000459990 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
SYN3-205ENST00000459990 SLC27A3Q5K4L6 730 aa13.76□□□□□ -0.21
SYN3-205ENST00000459990 KIF24Q5T7B8 1368 aa13.74□□□□□ -0.21
SYN3-205ENST00000459990 EMILIN1Q9Y6C2 1016 aa13.74□□□□□ -0.21
SYN3-205ENST00000459990 SLC24A1O60721 1099 aa13.73□□□□□ -0.21
SYN3-205ENST00000459990 CYP27B1O15528 508 aa13.72□□□□□ -0.21
SYN3-205ENST00000459990 CCNL1Q9UK58 526 aaPredicted RBP13.72□□□□□ -0.21
SYN3-205ENST00000459990 CGNL1Q0VF96 1302 aa13.71□□□□□ -0.21
SYN3-205ENST00000459990 PCDH11XQ9BZA7 1347 aa13.71□□□□□ -0.21
SYN3-205ENST00000459990 PCDH11YQ9BZA8 1340 aa13.71□□□□□ -0.21
SYN3-205ENST00000459990 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
SYN3-205ENST00000459990 ZNF784Q8NCA9 323 aaPredicted RBP13.71□□□□□ -0.21
SYN3-205ENST00000459990 NLGN2Q8NFZ4 835 aa13.71□□□□□ -0.21
SYN3-205ENST00000459990 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
SYN3-205ENST00000459990 TFCP2L1Q9NZI6 479 aa13.71□□□□□ -0.21
SYN3-205ENST00000459990 TATP17735 454 aaPredicted RBP13.7□□□□□ -0.22
SYN3-205ENST00000459990 AMIGO3Q86WK7 504 aa13.7□□□□□ -0.22
SYN3-205ENST00000459990 COL23A1Q86Y22 540 aaPredicted RBP13.7□□□□□ -0.22
SYN3-205ENST00000459990 SLC16A10Q8TF71 515 aa13.7□□□□□ -0.22
SYN3-205ENST00000459990 PALLDQ8WX93 1383 aa13.7□□□□□ -0.22
SYN3-205ENST00000459990 KLHL34Q8N239 644 aa13.68□□□□□ -0.22
SYN3-205ENST00000459990 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
SYN3-205ENST00000459990 CDCA8Q53HL2 280 aa13.67□□□□□ -0.22
SYN3-205ENST00000459990 MSL1Q68DK7 614 aa13.67□□□□□ -0.22
SYN3-205ENST00000459990 KIAA1551Q9HCM1 1747 aa13.67□□□□□ -0.22
SYN3-205ENST00000459990 MPRIPQ6WCQ1 1025 aa13.66□□□□□ -0.22
SYN3-205ENST00000459990 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
SYN3-205ENST00000459990 WASHC2AQ641Q2 1341 aa13.65□□□□□ -0.22
SYN3-205ENST00000459990 POLD1P28340 1107 aa13.65□□□□□ -0.22
SYN3-205ENST00000459990 ZNF831Q5JPB2 1677 aa13.65□□□□□ -0.22
SYN3-205ENST00000459990 C4AP0C0L4 1744 aa13.64□□□□□ -0.23
SYN3-205ENST00000459990 PPM1GO15355 546 aaPredicted RBP13.64□□□□□ -0.23
SYN3-205ENST00000459990 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
SYN3-205ENST00000459990 PIGBQ92521 554 aa13.64□□□□□ -0.23
SYN3-205ENST00000459990 EYA1Q99502 592 aa13.64□□□□□ -0.23
SYN3-205ENST00000459990 POLKQ9UBT6 870 aa13.64□□□□□ -0.23
SYN3-205ENST00000459990 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
SYN3-205ENST00000459990 KIF13BQ9NQT8 1826 aa13.63□□□□□ -0.23
SYN3-205ENST00000459990 NKX1-1Q15270 411 aaPredicted RBP13.63□□□□□ -0.23
SYN3-205ENST00000459990 KDRP35968 1356 aa13.62□□□□□ -0.23
SYN3-205ENST00000459990 MSH5O43196 834 aa13.62□□□□□ -0.23
SYN3-205ENST00000459990 EIF4A2Q14240 407 aaKnown RBP13.62□□□□□ -0.23
SYN3-205ENST00000459990 GPR162Q16538 588 aa13.62□□□□□ -0.23
SYN3-205ENST00000459990 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
SYN3-205ENST00000459990 LINC00116Q8NCU8 138 aa13.61□□□□□ -0.23
SYN3-205ENST00000459990 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
SYN3-205ENST00000459990 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
SYN3-205ENST00000459990 MYH14Q7Z406 1995 aaKnown RBP13.6□□□□□ -0.23
SYN3-205ENST00000459990 KDM6AO15550 1401 aaPredicted RBP13.6□□□□□ -0.23
SYN3-205ENST00000459990 PHKG2P15735 406 aa13.6□□□□□ -0.23
SYN3-205ENST00000459990 TNNT2P45379 298 aaPredicted RBP13.6□□□□□ -0.23
SYN3-205ENST00000459990 TJP1Q07157 1748 aa13.6□□□□□ -0.23
SYN3-205ENST00000459990 CICQ96RK0 1608 aaPredicted RBP13.6□□□□□ -0.23
SYN3-205ENST00000459990 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
SYN3-205ENST00000459990 N4BP2Q86UW6 1770 aaPredicted RBP13.59□□□□□ -0.23
SYN3-205ENST00000459990 SCN11AQ9UI33 1791 aa13.59□□□□□ -0.23
SYN3-205ENST00000459990 PHF14O94880 888 aa13.59□□□□□ -0.23
SYN3-205ENST00000459990 HSPA5P11021 654 aaKnown RBP13.59□□□□□ -0.23
SYN3-205ENST00000459990 ITPK1Q13572 414 aa13.59□□□□□ -0.23
SYN3-205ENST00000459990 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
SYN3-205ENST00000459990 PCGF6Q9BYE7 350 aa13.59□□□□□ -0.23
SYN3-205ENST00000459990 ASAP1Q9ULH1 1129 aa13.59□□□□□ -0.23
SYN3-205ENST00000459990 BRCA1P38398 1863 aaKnown RBP13.59□□□□□ -0.23
SYN3-205ENST00000459990 LOC102724428A0A0B4J2F2 783 aa13.58□□□□□ -0.24
SYN3-205ENST00000459990 SIK1P57059 783 aa13.58□□□□□ -0.24
SYN3-205ENST00000459990 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
SYN3-205ENST00000459990 ADAMTS7Q9UKP4 1686 aa13.57□□□□□ -0.24
SYN3-205ENST00000459990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.57□□□□□ -0.24
SYN3-205ENST00000459990 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms