RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
NCSTN-209ENST00000459963 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
NCSTN-209ENST00000459963 ROCK1Q13464 1354 aa12.32□□□□□ -0.44
NCSTN-209ENST00000459963 EIF3AQ14152 1382 aaKnown RBP12.32□□□□□ -0.44
NCSTN-209ENST00000459963 USP6P35125 1406 aa12.32□□□□□ -0.44
NCSTN-209ENST00000459963 EXOC5O00471 708 aa12.32□□□□□ -0.44
NCSTN-209ENST00000459963 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
NCSTN-209ENST00000459963 C10orf71Q711Q0 1435 aa12.31□□□□□ -0.44
NCSTN-209ENST00000459963 BTAF1O14981 1849 aa12.3□□□□□ -0.44
NCSTN-209ENST00000459963 CCDC85CA6NKD9 419 aa12.29□□□□□ -0.44
NCSTN-209ENST00000459963 GCP02774 474 aa12.29□□□□□ -0.44
NCSTN-209ENST00000459963 CTCFP49711 727 aaPredicted RBP12.29□□□□□ -0.44
NCSTN-209ENST00000459963 COL23A1Q86Y22 540 aaPredicted RBP12.29□□□□□ -0.44
NCSTN-209ENST00000459963 PIK3C2GO75747 1445 aa12.28□□□□□ -0.44
NCSTN-209ENST00000459963 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
NCSTN-209ENST00000459963 POGKQ9P215 609 aa12.28□□□□□ -0.44
NCSTN-209ENST00000459963 TRPM1Q7Z4N2 1603 aa12.28□□□□□ -0.44
NCSTN-209ENST00000459963 EVX2Q03828 476 aa12.27□□□□□ -0.45
NCSTN-209ENST00000459963 ABTB2Q8N961 1025 aa12.27□□□□□ -0.45
NCSTN-209ENST00000459963 RRAGCQ9HB90 399 aa12.27□□□□□ -0.45
NCSTN-209ENST00000459963 WDR17Q8IZU2 1322 aa12.27□□□□□ -0.45
NCSTN-209ENST00000459963 KDM2BQ8NHM5 1336 aa12.27□□□□□ -0.45
NCSTN-209ENST00000459963 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.45
NCSTN-209ENST00000459963 ZBTB7CA1YPR0 619 aa12.26□□□□□ -0.45
NCSTN-209ENST00000459963 KCNQ4P56696 695 aa12.26□□□□□ -0.45
NCSTN-209ENST00000459963 PLEKHG2Q9H7P9 1386 aa12.26□□□□□ -0.45
NCSTN-209ENST00000459963 KCPQ6ZWJ8 1503 aa12.26□□□□□ -0.45
NCSTN-209ENST00000459963 AIDAQ96BJ3 306 aa12.25□□□□□ -0.45
NCSTN-209ENST00000459963 WASLO00401 505 aaPredicted RBP12.24□□□□□ -0.45
NCSTN-209ENST00000459963 LBX1P52954 281 aa12.24□□□□□ -0.45
NCSTN-209ENST00000459963 NLRP13Q86W25 1043 aa12.23□□□□□ -0.45
NCSTN-209ENST00000459963 CARD10Q9BWT7 1032 aa12.23□□□□□ -0.45
NCSTN-209ENST00000459963 C14orf93Q9H972 538 aaKnown RBP12.23□□□□□ -0.45
NCSTN-209ENST00000459963 PIK3C2AO00443 1686 aa12.22□□□□□ -0.45
NCSTN-209ENST00000459963 ABCC6O95255 1503 aa12.22□□□□□ -0.45
NCSTN-209ENST00000459963 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
NCSTN-209ENST00000459963 C9orf131Q5VYM1 1079 aa12.22□□□□□ -0.45
NCSTN-209ENST00000459963 ARHGAP27Q6ZUM4 889 aa12.22□□□□□ -0.45
NCSTN-209ENST00000459963 MKRN1Q9UHC7 482 aaKnown RBP12.22□□□□□ -0.45
NCSTN-209ENST00000459963 TNRC6CQ9HCJ0 1690 aaKnown RBP12.22□□□□□ -0.45
NCSTN-209ENST00000459963 RGL3Q3MIN7 710 aa12.21□□□□□ -0.45
NCSTN-209ENST00000459963 AXIN2Q9Y2T1 843 aa12.21□□□□□ -0.45
NCSTN-209ENST00000459963 ITSN1Q15811 1721 aa12.2□□□□□ -0.46
NCSTN-209ENST00000459963 POLR3AO14802 1390 aaPredicted RBP12.19□□□□□ -0.46
NCSTN-209ENST00000459963 TNRC18O15417 2968 aaPredicted RBP12.19□□□□□ -0.46
NCSTN-209ENST00000459963 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
NCSTN-209ENST00000459963 BCS1LQ9Y276 419 aa12.19□□□□□ -0.46
NCSTN-209ENST00000459963 PPIP5K1Q6PFW1 1433 aa12.19□□□□□ -0.46
NCSTN-209ENST00000459963 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
NCSTN-209ENST00000459963 COL18A1P39060 1754 aa12.18□□□□□ -0.46
NCSTN-209ENST00000459963 ACEP12821 1306 aa12.18□□□□□ -0.46
NCSTN-209ENST00000459963 CSB-PGBD3P0DP91 1061 aa12.18□□□□□ -0.46
NCSTN-209ENST00000459963 CFAP70Q5T0N1 1121 aa12.17□□□□□ -0.46
NCSTN-209ENST00000459963 WBP1LQ9NX94 342 aa12.17□□□□□ -0.46
NCSTN-209ENST00000459963 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
NCSTN-209ENST00000459963 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
NCSTN-209ENST00000459963 HSPA8P11142 646 aaKnown RBP12.16□□□□□ -0.46
NCSTN-209ENST00000459963 FLAD1Q8NFF5 587 aa12.16□□□□□ -0.46
NCSTN-209ENST00000459963 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
NCSTN-209ENST00000459963 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
NCSTN-209ENST00000459963 LY75O60449 1722 aa12.15□□□□□ -0.46
NCSTN-209ENST00000459963 SPATA31E1Q6ZUB1 1445 aa12.15□□□□□ -0.46
NCSTN-209ENST00000459963 PRPF38BQ5VTL8 546 aaKnown RBP12.14□□□□□ -0.47
NCSTN-209ENST00000459963 MIER1Q8N108 512 aa12.14□□□□□ -0.47
NCSTN-209ENST00000459963 SLIT3O75094 1523 aa12.13□□□□□ -0.47
NCSTN-209ENST00000459963 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
NCSTN-209ENST00000459963 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
NCSTN-209ENST00000459963 RNF181Q9P0P0 153 aa12.13□□□□□ -0.47
NCSTN-209ENST00000459963 TRAK1Q9UPV9 953 aa12.13□□□□□ -0.47
NCSTN-209ENST00000459963 CPSF1Q10570 1443 aaKnown RBP12.12□□□□□ -0.47
NCSTN-209ENST00000459963 TGFB2P61812 414 aa12.12□□□□□ -0.47
NCSTN-209ENST00000459963 KAT6BQ8WYB5 2073 aa12.12□□□□□ -0.47
NCSTN-209ENST00000459963 USP54Q70EL1 1684 aa12.11□□□□□ -0.47
NCSTN-209ENST00000459963 QRICH2Q9H0J4 1663 aa12.11□□□□□ -0.47
NCSTN-209ENST00000459963 PLEKHG3A1L390 1219 aa12.11□□□□□ -0.47
NCSTN-209ENST00000459963 GABBR2O75899 941 aa12.11□□□□□ -0.47
NCSTN-209ENST00000459963 FCHSD2O94868 740 aa12.11□□□□□ -0.47
NCSTN-209ENST00000459963 IL2RBP14784 551 aa12.11□□□□□ -0.47
NCSTN-209ENST00000459963 SYTL4Q96C24 671 aaPredicted RBP12.11□□□□□ -0.47
NCSTN-209ENST00000459963 A0A0G2JLW4 131 aa12.1□□□□□ -0.47
NCSTN-209ENST00000459963 VEGFBP49765 207 aa12.1□□□□□ -0.47
NCSTN-209ENST00000459963 NLRP6P59044 892 aa12.1□□□□□ -0.47
NCSTN-209ENST00000459963 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
NCSTN-209ENST00000459963 KIAA1551Q9HCM1 1747 aa12.1□□□□□ -0.47
NCSTN-209ENST00000459963 PDE4DIPQ5VU43 2346 aa12.1□□□□□ -0.47
NCSTN-209ENST00000459963 ARHGEF25Q86VW2 580 aa12.09□□□□□ -0.47
NCSTN-209ENST00000459963 N4BP2Q86UW6 1770 aaPredicted RBP12.09□□□□□ -0.47
NCSTN-209ENST00000459963 RGPD5Q99666 1765 aa12.09□□□□□ -0.47
NCSTN-209ENST00000459963 ERBB3P21860 1342 aa12.09□□□□□ -0.47
NCSTN-209ENST00000459963 NSD2O96028 1365 aa12.08□□□□□ -0.48
NCSTN-209ENST00000459963 ITGAEP38570 1179 aa12.08□□□□□ -0.48
NCSTN-209ENST00000459963 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
NCSTN-209ENST00000459963 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
NCSTN-209ENST00000459963 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
NCSTN-209ENST00000459963 ANKRD36BQ8N2N9 1353 aa12.07□□□□□ -0.48
NCSTN-209ENST00000459963 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
NCSTN-209ENST00000459963 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
NCSTN-209ENST00000459963 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
NCSTN-209ENST00000459963 KIF13BQ9NQT8 1826 aa12.07□□□□□ -0.48
NCSTN-209ENST00000459963 ADGRB1O14514 1584 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms