RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 MARF1Q9Y4F3 1742 aaKnown RBP7.52□□□□□ -1.2
RNU1-88P-201ENST00000459274 COL3A1P02461 1466 aaPredicted RBP7.52□□□□□ -1.21
RNU1-88P-201ENST00000459274 KIAA0232Q92628 1395 aa7.52□□□□□ -1.21
RNU1-88P-201ENST00000459274 IPO8O15397 1037 aaKnown RBP7.52□□□□□ -1.21
RNU1-88P-201ENST00000459274 SLFN5Q08AF3 891 aa7.52□□□□□ -1.21
RNU1-88P-201ENST00000459274 ERICH6BQ5W0A0 696 aa7.52□□□□□ -1.21
RNU1-88P-201ENST00000459274 ZNF428Q96B54 188 aa7.52□□□□□ -1.21
RNU1-88P-201ENST00000459274 PEAK1Q9H792 1746 aa7.52□□□□□ -1.21
RNU1-88P-201ENST00000459274 NFAT5O94916 1531 aa7.52□□□□□ -1.21
RNU1-88P-201ENST00000459274 MED1Q15648 1581 aaPredicted RBP7.51□□□□□ -1.21
RNU1-88P-201ENST00000459274 AKAP4Q5JQC9 854 aa7.51□□□□□ -1.21
RNU1-88P-201ENST00000459274 ZNF530Q6P9A1 599 aaPredicted RBP7.51□□□□□ -1.21
RNU1-88P-201ENST00000459274 NGLY1Q96IV0 654 aa7.51□□□□□ -1.21
RNU1-88P-201ENST00000459274 CDCA7Q9BWT1 371 aaPredicted RBP7.51□□□□□ -1.21
RNU1-88P-201ENST00000459274 CHMP4BQ9H444 224 aaKnown RBP7.51□□□□□ -1.21
RNU1-88P-201ENST00000459274 IFT57Q9NWB7 429 aa7.51□□□□□ -1.21
RNU1-88P-201ENST00000459274 RGPD2P0DJD1 1756 aa7.51□□□□□ -1.21
RNU1-88P-201ENST00000459274 COL14A1Q05707 1796 aaKnown RBP7.51□□□□□ -1.21
RNU1-88P-201ENST00000459274 ERBB3P21860 1342 aa7.51□□□□□ -1.21
RNU1-88P-201ENST00000459274 JCADQ9P266 1359 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 ADAMTS2O95450 1211 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 IL2RBP14784 551 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 FKBP8Q14318 412 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 NBPF6Q5VWK0 638 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 IFNL2Q8IZJ0 200 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 USHBP1Q8N6Y0 703 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 CDCA7LQ96GN5 454 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 PHACTR3Q96KR7 559 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 NBPF4Q96M43 638 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 CFAP44Q96MT7 982 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 BTG4Q9NY30 223 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 SPATA31A6Q5VVP1 1343 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 WDR17Q8IZU2 1322 aa7.5□□□□□ -1.21
RNU1-88P-201ENST00000459274 KDRP35968 1356 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 MAP3K5Q99683 1374 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 PLEKHG2Q9H7P9 1386 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 A0A0G2JS52 829 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 MYT1Q01538 1121 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 TAF7Q15545 349 aaPredicted RBP7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 MTHFSDQ2M296 383 aaKnown RBP7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 AEBP1Q8IUX7 1158 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 STK31Q9BXU1 1019 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 BABAM1Q9NWV8 329 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 USP35Q9P2H5 1018 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 TSPYL4Q9UJ04 414 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 RGPD1P0DJD0 1748 aa7.49□□□□□ -1.21
RNU1-88P-201ENST00000459274 CACNA1FO60840 1977 aa7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 FAM83GA6ND36 823 aa7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 EXOC5O00471 708 aa7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 DUSP27Q5VZP5 1158 aa7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 FTSJ3Q8IY81 847 aaKnown RBP7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 TTC5Q8N0Z6 440 aa7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 ZCRB1Q8TBF4 217 aaKnown RBP7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 FRAT1Q92837 279 aaPredicted RBP7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 CARD10Q9BWT7 1032 aa7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 PARP4Q9UKK3 1724 aaKnown RBP7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 AXIN2Q9Y2T1 843 aa7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 THRAP3Q9Y2W1 955 aaKnown RBP7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 COL22A1Q8NFW1 1626 aaPredicted RBP7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 PCDH11XQ9BZA7 1347 aa7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 PCDH11YQ9BZA8 1340 aa7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 VIRMAQ69YN4 1812 aaKnown RBP7.48□□□□□ -1.21
RNU1-88P-201ENST00000459274 ABCA3Q99758 1704 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 CRB1P82279 1406 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 CABP4P57796 275 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 MCM10Q7L590 875 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 NPM2Q86SE8 214 aaKnown RBP7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 DCAF5Q96JK2 942 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 C8orf37Q96NL8 207 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 SMC4Q9NTJ3 1288 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 TRIM35Q9UPQ4 493 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 SOS1Q07889 1333 aaPredicted RBP7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 ZNF521Q96K83 1311 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 KIF16BQ96L93 1317 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 CRYBG1Q9Y4K1 1723 aa7.47□□□□□ -1.21
RNU1-88P-201ENST00000459274 NCAPD2Q15021 1401 aa7.46□□□□□ -1.21
RNU1-88P-201ENST00000459274 BTBD11A6QL63 1104 aa7.46□□□□□ -1.22
RNU1-88P-201ENST00000459274 EXOSC9Q06265 439 aaKnown RBP7.46□□□□□ -1.22
RNU1-88P-201ENST00000459274 TWISTNBQ3B726 338 aaPredicted RBP7.46□□□□□ -1.22
RNU1-88P-201ENST00000459274 ALDH1L2Q3SY69 923 aa7.46□□□□□ -1.22
RNU1-88P-201ENST00000459274 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.22
RNU1-88P-201ENST00000459274 LMO7Q8WWI1 1683 aa7.46□□□□□ -1.22
RNU1-88P-201ENST00000459274 COL18A1P39060 1754 aa7.46□□□□□ -1.22
RNU1-88P-201ENST00000459274 COL16A1Q07092 1604 aaPredicted RBP7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 NWD2Q9ULI1 1742 aa7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 HMGB2P26583 209 aaKnown RBP7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 AAMPQ13685 434 aa7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 DCTN1Q14203 1278 aa7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 CCDC30Q5VVM6 783 aa7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 ZKSCAN2Q63HK3 967 aa7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 LARP1Q6PKG0 1096 aaKnown RBP7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 TRMT2AQ8IZ69 625 aaKnown RBP7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 TSR2Q969E8 191 aaKnown RBP7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 FANCIQ9NVI1 1328 aa7.45□□□□□ -1.22
RNU1-88P-201ENST00000459274 COL5A2P05997 1499 aaPredicted RBP7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 ELL2O00472 640 aaPredicted RBP7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 RNMTO43148 476 aaKnown RBP7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 RRP1P56182 461 aaKnown RBP7.44□□□□□ -1.22
RNU1-88P-201ENST00000459274 DDB1Q16531 1140 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms