RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 TBC1D9Q6ZT07 1266 aa6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 KIFC2Q96AC6 838 aa6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 ZFP42Q96MM3 310 aa6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 PURBQ96QR8 312 aaKnown RBP6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 OSBPL3Q9H4L5 887 aa6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 GMPR2Q9P2T1 348 aaKnown RBP6.15□□□□□ -1.42
SCARNA18-201ENST00000459004 RELBQ01201 579 aa6.14□□□□□ -1.43
SCARNA18-201ENST00000459004 EML3Q32P44 896 aa6.14□□□□□ -1.43
SCARNA18-201ENST00000459004 C6orf118Q5T5N4 469 aa6.14□□□□□ -1.43
SCARNA18-201ENST00000459004 CYP2U1Q7Z449 544 aa6.14□□□□□ -1.43
SCARNA18-201ENST00000459004 AGBL1Q96MI9 1066 aa6.14□□□□□ -1.43
SCARNA18-201ENST00000459004 USP17L5A8MUK1 530 aa6.13□□□□□ -1.43
SCARNA18-201ENST00000459004 SPINT1O43278 529 aa6.13□□□□□ -1.43
SCARNA18-201ENST00000459004 NCOA4Q13772 614 aa6.13□□□□□ -1.43
SCARNA18-201ENST00000459004 ZNF787Q6DD87 383 aa6.13□□□□□ -1.43
SCARNA18-201ENST00000459004 PLEKHM2Q8IWE5 1019 aa6.13□□□□□ -1.43
SCARNA18-201ENST00000459004 KDF1Q8NAX2 398 aaPredicted RBP6.13□□□□□ -1.43
SCARNA18-201ENST00000459004 TRIM47Q96LD4 638 aa6.13□□□□□ -1.43
SCARNA18-201ENST00000459004 PPP1R12CQ9BZL4 782 aa6.13□□□□□ -1.43
SCARNA18-201ENST00000459004 TFIP11Q9UBB9 837 aaKnown RBP6.13□□□□□ -1.43
SCARNA18-201ENST00000459004 PALM3A6NDB9 673 aaPredicted RBP6.12□□□□□ -1.43
SCARNA18-201ENST00000459004 POTECB2RU33 542 aa6.12□□□□□ -1.43
SCARNA18-201ENST00000459004 C11orf95C9JLR9 678 aaPredicted RBP6.12□□□□□ -1.43
SCARNA18-201ENST00000459004 GNRH1P01148 92 aa6.12□□□□□ -1.43
SCARNA18-201ENST00000459004 ZNF395Q9H8N7 513 aaPredicted RBP6.12□□□□□ -1.43
SCARNA18-201ENST00000459004 TIMELESSQ9UNS1 1208 aa6.12□□□□□ -1.43
SCARNA18-201ENST00000459004 NOD1Q9Y239 953 aa6.12□□□□□ -1.43
SCARNA18-201ENST00000459004 A0A1W2PRU2 124 aa6.11□□□□□ -1.43
SCARNA18-201ENST00000459004 USP17L3A6NCW0 530 aa6.11□□□□□ -1.43
SCARNA18-201ENST00000459004 USP17L4A6NCW7 530 aa6.11□□□□□ -1.43
SCARNA18-201ENST00000459004 USP17L2Q6R6M4 530 aa6.11□□□□□ -1.43
SCARNA18-201ENST00000459004 USP17L1Q7RTZ2 530 aa6.11□□□□□ -1.43
SCARNA18-201ENST00000459004 DEPDC4Q8N2C3 294 aa6.11□□□□□ -1.43
SCARNA18-201ENST00000459004 MAFBQ9Y5Q3 323 aaPredicted RBP6.11□□□□□ -1.43
SCARNA18-201ENST00000459004 SOS2Q07890 1332 aaPredicted RBP6.1□□□□□ -1.43
SCARNA18-201ENST00000459004 ARID3CA6NKF2 412 aa6.1□□□□□ -1.43
SCARNA18-201ENST00000459004 TRIM50Q86XT4 487 aa6.1□□□□□ -1.43
SCARNA18-201ENST00000459004 INSM2Q96T92 566 aaPredicted RBP6.1□□□□□ -1.43
SCARNA18-201ENST00000459004 POLMQ9NP87 494 aaPredicted RBP6.1□□□□□ -1.43
SCARNA18-201ENST00000459004 SERPINA10Q9UK55 444 aa6.1□□□□□ -1.43
SCARNA18-201ENST00000459004 PCDHGA11Q9Y5H2 935 aa6.1□□□□□ -1.43
SCARNA18-201ENST00000459004 TTLL8A6PVC2 850 aa6.09□□□□□ -1.43
SCARNA18-201ENST00000459004 MEN1O00255 615 aa6.09□□□□□ -1.43
SCARNA18-201ENST00000459004 SNRPBP14678 240 aaKnown RBP6.09□□□□□ -1.43
SCARNA18-201ENST00000459004 LMOD1P29536 600 aaPredicted RBP6.09□□□□□ -1.43
SCARNA18-201ENST00000459004 GPC1P35052 558 aa6.09□□□□□ -1.43
SCARNA18-201ENST00000459004 CTSOP43234 321 aaPredicted RBP6.09□□□□□ -1.43
SCARNA18-201ENST00000459004 ESCO1Q5FWF5 840 aa6.09□□□□□ -1.43
SCARNA18-201ENST00000459004 ARHGEF10LQ9HCE6 1279 aa6.09□□□□□ -1.43
SCARNA18-201ENST00000459004 MKRN1Q9UHC7 482 aaKnown RBP6.09□□□□□ -1.43
SCARNA18-201ENST00000459004 RNF144AP50876 292 aaPredicted RBP6.08□□□□□ -1.44
SCARNA18-201ENST00000459004 ATP1A2P50993 1020 aa6.08□□□□□ -1.44
SCARNA18-201ENST00000459004 GTF2IP78347 998 aa6.08□□□□□ -1.44
SCARNA18-201ENST00000459004 CLN3Q13286 438 aa6.08□□□□□ -1.44
SCARNA18-201ENST00000459004 CCDC97Q96F63 343 aaPredicted RBP6.08□□□□□ -1.44
SCARNA18-201ENST00000459004 XAGE2Q96GT9 111 aa6.08□□□□□ -1.44
SCARNA18-201ENST00000459004 NLRP3Q96P20 1036 aa6.08□□□□□ -1.44
SCARNA18-201ENST00000459004 FIGNL2A6NMB9 653 aa6.07□□□□□ -1.44
SCARNA18-201ENST00000459004 MAN1A2O60476 641 aa6.07□□□□□ -1.44
SCARNA18-201ENST00000459004 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.07□□□□□ -1.44
SCARNA18-201ENST00000459004 CFAP70Q5T0N1 1121 aa6.07□□□□□ -1.44
SCARNA18-201ENST00000459004 FOXD4L5Q5VV16 416 aaPredicted RBP6.07□□□□□ -1.44
SCARNA18-201ENST00000459004 CNKSR1Q969H4 720 aa6.07□□□□□ -1.44
SCARNA18-201ENST00000459004 ESYT1Q9BSJ8 1104 aa6.07□□□□□ -1.44
SCARNA18-201ENST00000459004 VRTNQ9H8Y1 702 aa6.07□□□□□ -1.44
SCARNA18-201ENST00000459004 ETNK1Q9HBU6 452 aa6.07□□□□□ -1.44
SCARNA18-201ENST00000459004 RAB6BQ9NRW1 208 aa6.07□□□□□ -1.44
SCARNA18-201ENST00000459004 WASLO00401 505 aaPredicted RBP6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 ZBTB7BO15156 539 aaPredicted RBP6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 IL2RAP01589 272 aa6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 INHAP05111 366 aa6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 SCNN1DP51172 638 aa6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 GDF10P55107 478 aa6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 PSME1Q06323 249 aa6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 KANK4Q5T7N3 995 aaPredicted RBP6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 LARGE2Q8N3Y3 721 aa6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 OGFOD1Q8N543 542 aa6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 RNF217Q8TC41 542 aa6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 DNAAF2Q9NVR5 837 aaKnown RBP6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 DNMT3LQ9UJW3 386 aa6.06□□□□□ -1.44
SCARNA18-201ENST00000459004 RASA1P20936 1047 aa6.05□□□□□ -1.44
SCARNA18-201ENST00000459004 RFX1P22670 979 aa6.05□□□□□ -1.44
SCARNA18-201ENST00000459004 CLDN10P78369 228 aa6.05□□□□□ -1.44
SCARNA18-201ENST00000459004 CENPCQ03188 943 aa6.05□□□□□ -1.44
SCARNA18-201ENST00000459004 SLC27A3Q5K4L6 730 aa6.05□□□□□ -1.44
SCARNA18-201ENST00000459004 LARP1Q6PKG0 1096 aaKnown RBP6.05□□□□□ -1.44
SCARNA18-201ENST00000459004 LYSMD3Q7Z3D4 306 aa6.05□□□□□ -1.44
SCARNA18-201ENST00000459004 GRIP2Q9C0E4 1043 aa6.05□□□□□ -1.44
SCARNA18-201ENST00000459004 HRH3Q9Y5N1 445 aa6.05□□□□□ -1.44
SCARNA18-201ENST00000459004 SOBPA7XYQ1 873 aa6.04□□□□□ -1.44
SCARNA18-201ENST00000459004 TMEM229AB2RXF0 380 aa6.04□□□□□ -1.44
SCARNA18-201ENST00000459004 SUPT5HO00267 1087 aaKnown RBP6.04□□□□□ -1.44
SCARNA18-201ENST00000459004 BACH1O14867 736 aa6.04□□□□□ -1.44
SCARNA18-201ENST00000459004 STAU1O95793 577 aaKnown RBP6.04□□□□□ -1.44
SCARNA18-201ENST00000459004 CCDC102BQ68D86 513 aa6.04□□□□□ -1.44
SCARNA18-201ENST00000459004 SLC4A9Q96Q91 983 aa6.04□□□□□ -1.44
SCARNA18-201ENST00000459004 C1orf115Q9H7X2 142 aa6.04□□□□□ -1.44
SCARNA18-201ENST00000459004 SMTNP53814 917 aa6.03□□□□□ -1.44
SCARNA18-201ENST00000459004 PRICKLE2Q7Z3G6 844 aa6.03□□□□□ -1.44
SCARNA18-201ENST00000459004 SIX5Q8N196 739 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms