RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 PNPLA7Q6ZV29 1317 aa14.69□□□□□ -0.06
HDLBP-227ENST00000458564 AMPHP49418 695 aa14.69□□□□□ -0.06
HDLBP-227ENST00000458564 KAT6BQ8WYB5 2073 aa14.69□□□□□ -0.06
HDLBP-227ENST00000458564 CGNL1Q0VF96 1302 aa14.68□□□□□ -0.06
HDLBP-227ENST00000458564 CHD4Q14839 1912 aa14.68□□□□□ -0.06
HDLBP-227ENST00000458564 PRIM1P49642 420 aaKnown RBP14.68□□□□□ -0.06
HDLBP-227ENST00000458564 ZCRB1Q8TBF4 217 aaKnown RBP14.68□□□□□ -0.06
HDLBP-227ENST00000458564 TUBGCP6Q96RT7 1819 aa14.66□□□□□ -0.06
HDLBP-227ENST00000458564 KIF24Q5T7B8 1368 aa14.66□□□□□ -0.06
HDLBP-227ENST00000458564 POLD1P28340 1107 aa14.66□□□□□ -0.06
HDLBP-227ENST00000458564 SYTL4Q96C24 671 aaPredicted RBP14.66□□□□□ -0.06
HDLBP-227ENST00000458564 TFCP2L1Q9NZI6 479 aa14.66□□□□□ -0.06
HDLBP-227ENST00000458564 SMG6Q86US8 1419 aaKnown RBP14.66□□□□□ -0.06
HDLBP-227ENST00000458564 RGPD2P0DJD1 1756 aa14.65□□□□□ -0.06
HDLBP-227ENST00000458564 FYB1O15117 783 aa14.65□□□□□ -0.06
HDLBP-227ENST00000458564 FBLN1P23142 703 aa14.65□□□□□ -0.06
HDLBP-227ENST00000458564 RRS1Q15050 365 aaKnown RBP14.64□□□□□ -0.07
HDLBP-227ENST00000458564 NBPF6Q5VWK0 638 aa14.64□□□□□ -0.07
HDLBP-227ENST00000458564 NBPF4Q96M43 638 aa14.64□□□□□ -0.07
HDLBP-227ENST00000458564 INSRP06213 1382 aa14.63□□□□□ -0.07
HDLBP-227ENST00000458564 USP47Q96K76 1375 aa14.63□□□□□ -0.07
HDLBP-227ENST00000458564 KCNQ4P56696 695 aa14.63□□□□□ -0.07
HDLBP-227ENST00000458564 TMF1P82094 1093 aa14.63□□□□□ -0.07
HDLBP-227ENST00000458564 CCNL1Q9UK58 526 aaPredicted RBP14.63□□□□□ -0.07
HDLBP-227ENST00000458564 FLT4P35916 1363 aa14.62□□□□□ -0.07
HDLBP-227ENST00000458564 GPR162Q16538 588 aa14.62□□□□□ -0.07
HDLBP-227ENST00000458564 RAPGEF4Q8WZA2 1011 aa14.62□□□□□ -0.07
HDLBP-227ENST00000458564 GGNBP2Q9H3C7 697 aa14.62□□□□□ -0.07
HDLBP-227ENST00000458564 HMGB2P26583 209 aaKnown RBP14.61□□□□□ -0.07
HDLBP-227ENST00000458564 PCDH11XQ9BZA7 1347 aa14.61□□□□□ -0.07
HDLBP-227ENST00000458564 PCDH11YQ9BZA8 1340 aa14.61□□□□□ -0.07
HDLBP-227ENST00000458564 NCAPD2Q15021 1401 aa14.6□□□□□ -0.07
HDLBP-227ENST00000458564 TATP17735 454 aaPredicted RBP14.6□□□□□ -0.07
HDLBP-227ENST00000458564 USHBP1Q8N6Y0 703 aa14.6□□□□□ -0.07
HDLBP-227ENST00000458564 KIF20BQ96Q89 1820 aa14.59□□□□□ -0.07
HDLBP-227ENST00000458564 C5P01031 1676 aa14.59□□□□□ -0.07
HDLBP-227ENST00000458564 CDCA8Q53HL2 280 aa14.59□□□□□ -0.07
HDLBP-227ENST00000458564 HSP90AB2PQ58FF8 381 aa14.59□□□□□ -0.07
HDLBP-227ENST00000458564 COL23A1Q86Y22 540 aaPredicted RBP14.59□□□□□ -0.07
HDLBP-227ENST00000458564 NLGN2Q8NFZ4 835 aa14.59□□□□□ -0.07
HDLBP-227ENST00000458564 C1QTNF8P60827 252 aa14.58□□□□□ -0.08
HDLBP-227ENST00000458564 KLHL34Q8N239 644 aa14.58□□□□□ -0.08
HDLBP-227ENST00000458564 PALLDQ8WX93 1383 aa14.58□□□□□ -0.08
HDLBP-227ENST00000458564 PKD1L3Q7Z443 1732 aa14.58□□□□□ -0.08
HDLBP-227ENST00000458564 ANKRD26Q9UPS8 1709 aa14.56□□□□□ -0.08
HDLBP-227ENST00000458564 TOGARAM1Q9Y4F4 1720 aa14.56□□□□□ -0.08
HDLBP-227ENST00000458564 CYP27B1O15528 508 aa14.56□□□□□ -0.08
HDLBP-227ENST00000458564 FLAD1Q8NFF5 587 aa14.56□□□□□ -0.08
HDLBP-227ENST00000458564 TAF1LQ8IZX4 1826 aa14.55□□□□□ -0.08
HDLBP-227ENST00000458564 GRIN3BO60391 1043 aa14.55□□□□□ -0.08
HDLBP-227ENST00000458564 NSD3Q9BZ95 1437 aa14.55□□□□□ -0.08
HDLBP-227ENST00000458564 YBX3P16989 372 aaKnown RBP eCLIP14.54□□□□□ -0.08
HDLBP-227ENST00000458564 SMARCC1Q92922 1105 aaPredicted RBP14.54□□□□□ -0.08
HDLBP-227ENST00000458564 CARD14Q9BXL6 1004 aa14.54□□□□□ -0.08
HDLBP-227ENST00000458564 CD2APQ9Y5K6 639 aa14.54□□□□□ -0.08
HDLBP-227ENST00000458564 CEP350Q5VT06 3117 aa14.54□□□□□ -0.08
HDLBP-227ENST00000458564 C4BP0C0L5 1744 aa14.53□□□□□ -0.08
HDLBP-227ENST00000458564 SENP3-EIF4A1A0A087X0R7 540 aa14.53□□□□□ -0.08
HDLBP-227ENST00000458564 MSH5O43196 834 aa14.53□□□□□ -0.08
HDLBP-227ENST00000458564 NKX1-1Q15270 411 aaPredicted RBP14.53□□□□□ -0.08
HDLBP-227ENST00000458564 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
HDLBP-227ENST00000458564 EMILIN1Q9Y6C2 1016 aa14.53□□□□□ -0.08
HDLBP-227ENST00000458564 PLEKHG2Q9H7P9 1386 aa14.52□□□□□ -0.08
HDLBP-227ENST00000458564 GIGYF1O75420 1035 aaPredicted RBP14.52□□□□□ -0.09
HDLBP-227ENST00000458564 MSL1Q68DK7 614 aa14.52□□□□□ -0.09
HDLBP-227ENST00000458564 MPRIPQ6WCQ1 1025 aa14.52□□□□□ -0.09
HDLBP-227ENST00000458564 WASHC2AQ641Q2 1341 aa14.51□□□□□ -0.09
HDLBP-227ENST00000458564 ITGB4P16144 1822 aa14.51□□□□□ -0.09
HDLBP-227ENST00000458564 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.51□□□□□ -0.092e-22■□□□□ 10.4
HDLBP-227ENST00000458564 MAP2P11137 1827 aaKnown RBP14.5□□□□□ -0.09
HDLBP-227ENST00000458564 PIGBQ92521 554 aa14.5□□□□□ -0.09
HDLBP-227ENST00000458564 SPG7Q9UQ90 795 aa14.5□□□□□ -0.09
HDLBP-227ENST00000458564 UBR3Q6ZT12 1888 aa14.5□□□□□ -0.09
HDLBP-227ENST00000458564 SSFA2P28290 1259 aa14.49□□□□□ -0.09
HDLBP-227ENST00000458564 AMIGO3Q86WK7 504 aa14.49□□□□□ -0.09
HDLBP-227ENST00000458564 AK7Q96M32 723 aa14.49□□□□□ -0.09
HDLBP-227ENST00000458564 TIMELESSQ9UNS1 1208 aa14.49□□□□□ -0.09
HDLBP-227ENST00000458564 ADCY9O60503 1353 aa14.47□□□□□ -0.09
HDLBP-227ENST00000458564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.47□□□□□ -0.09
HDLBP-227ENST00000458564 LOC102724428A0A0B4J2F2 783 aa14.47□□□□□ -0.09
HDLBP-227ENST00000458564 SIK1P57059 783 aa14.47□□□□□ -0.09
HDLBP-227ENST00000458564 EYA1Q99502 592 aa14.47□□□□□ -0.09
HDLBP-227ENST00000458564 ATP10DQ9P241 1426 aa14.47□□□□□ -0.09
HDLBP-227ENST00000458564 PPM1GO15355 546 aaPredicted RBP14.46□□□□□ -0.09
HDLBP-227ENST00000458564 TRIM26Q12899 539 aaPredicted RBP14.46□□□□□ -0.09
HDLBP-227ENST00000458564 TMOD3Q9NYL9 352 aa14.46□□□□□ -0.09
HDLBP-227ENST00000458564 POLKQ9UBT6 870 aa14.46□□□□□ -0.09
HDLBP-227ENST00000458564 PHKG2P15735 406 aa14.45□□□□□ -0.1
HDLBP-227ENST00000458564 LINC00116Q8NCU8 138 aa14.45□□□□□ -0.1
HDLBP-227ENST00000458564 PHF14O94880 888 aa14.44□□□□□ -0.1
HDLBP-227ENST00000458564 IFNL2Q8IZJ0 200 aa14.44□□□□□ -0.1
HDLBP-227ENST00000458564 KDRP35968 1356 aa14.44□□□□□ -0.1
HDLBP-227ENST00000458564 IGSF1Q8N6C5 1336 aa14.43□□□□□ -0.1
HDLBP-227ENST00000458564 ITPK1Q13572 414 aa14.43□□□□□ -0.1
HDLBP-227ENST00000458564 ASAP1Q9ULH1 1129 aa14.43□□□□□ -0.1
HDLBP-227ENST00000458564 ZNF831Q5JPB2 1677 aa14.42□□□□□ -0.1
HDLBP-227ENST00000458564 CLSPNQ9HAW4 1339 aa14.42□□□□□ -0.1
HDLBP-227ENST00000458564 CICQ96RK0 1608 aaPredicted RBP14.42□□□□□ -0.1
HDLBP-227ENST00000458564 EIF4A2Q14240 407 aaKnown RBP14.42□□□□□ -0.1
HDLBP-227ENST00000458564 GNPATO15228 680 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms