RNA–Protein interactions for RNA: ENST00000458264.1

LINC01248-201, Transcript of long intergenic non-protein coding RNA 1248, humanhuman

TSL 3 BASIC

Gene LINC01248, Length 468 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01248-201ENST00000458264 SLC16A10Q8TF71 515 aa20.72■□□□□ 0.91
LINC01248-201ENST00000458264 CGNL1Q0VF96 1302 aa20.72■□□□□ 0.91
LINC01248-201ENST00000458264 NBPF6Q5VWK0 638 aa20.71■□□□□ 0.91
LINC01248-201ENST00000458264 NBPF4Q96M43 638 aa20.71■□□□□ 0.91
LINC01248-201ENST00000458264 SMG6Q86US8 1419 aaKnown RBP20.7■□□□□ 0.9
LINC01248-201ENST00000458264 MEGF6O75095 1541 aa20.7■□□□□ 0.9
LINC01248-201ENST00000458264 RAPGEF4Q8WZA2 1011 aa20.69■□□□□ 0.9
LINC01248-201ENST00000458264 MAP3K5Q99683 1374 aa20.69■□□□□ 0.9
LINC01248-201ENST00000458264 TFCP2L1Q9NZI6 479 aa20.68■□□□□ 0.9
LINC01248-201ENST00000458264 NSD2O96028 1365 aa20.68■□□□□ 0.9
LINC01248-201ENST00000458264 INSRP06213 1382 aa20.68■□□□□ 0.9
LINC01248-201ENST00000458264 KAT6BQ8WYB5 2073 aa20.68■□□□□ 0.9
LINC01248-201ENST00000458264 TATP17735 454 aaPredicted RBP20.67■□□□□ 0.9
LINC01248-201ENST00000458264 USHBP1Q8N6Y0 703 aa20.67■□□□□ 0.9
LINC01248-201ENST00000458264 PNPLA7Q6ZV29 1317 aa20.67■□□□□ 0.9
LINC01248-201ENST00000458264 KIF24Q5T7B8 1368 aa20.67■□□□□ 0.9
LINC01248-201ENST00000458264 POLD1P28340 1107 aa20.66■□□□□ 0.9
LINC01248-201ENST00000458264 KCNQ4P56696 695 aa20.66■□□□□ 0.9
LINC01248-201ENST00000458264 HSP90AB2PQ58FF8 381 aa20.66■□□□□ 0.9
LINC01248-201ENST00000458264 FLT4P35916 1363 aa20.65■□□□□ 0.9
LINC01248-201ENST00000458264 CCNL1Q9UK58 526 aaPredicted RBP20.65■□□□□ 0.9
LINC01248-201ENST00000458264 RGPD2P0DJD1 1756 aa20.64■□□□□ 0.9
LINC01248-201ENST00000458264 DOT1LQ8TEK3 1739 aa20.64■□□□□ 0.9
LINC01248-201ENST00000458264 TIMELESSQ9UNS1 1208 aa20.64■□□□□ 0.89
LINC01248-201ENST00000458264 CARD14Q9BXL6 1004 aa20.63■□□□□ 0.89
LINC01248-201ENST00000458264 QSER1Q2KHR3 1735 aa20.63■□□□□ 0.89
LINC01248-201ENST00000458264 SHANK3Q9BYB0 1731 aa20.63■□□□□ 0.89
LINC01248-201ENST00000458264 PCDH11XQ9BZA7 1347 aa20.62■□□□□ 0.89
LINC01248-201ENST00000458264 PCDH11YQ9BZA8 1340 aa20.62■□□□□ 0.89
LINC01248-201ENST00000458264 HMGB2P26583 209 aaKnown RBP20.62■□□□□ 0.89
LINC01248-201ENST00000458264 LY75O60449 1722 aa20.61■□□□□ 0.89
LINC01248-201ENST00000458264 NSD3Q9BZ95 1437 aa20.6■□□□□ 0.89
LINC01248-201ENST00000458264 GPR162Q16538 588 aa20.59■□□□□ 0.89
LINC01248-201ENST00000458264 KLHL34Q8N239 644 aa20.59■□□□□ 0.89
LINC01248-201ENST00000458264 ZNF784Q8NCA9 323 aaPredicted RBP20.59■□□□□ 0.89
LINC01248-201ENST00000458264 KIF20BQ96Q89 1820 aa20.59■□□□□ 0.89
LINC01248-201ENST00000458264 EMILIN1Q9Y6C2 1016 aa20.58■□□□□ 0.89
LINC01248-201ENST00000458264 MSH5O43196 834 aa20.57■□□□□ 0.88
LINC01248-201ENST00000458264 COL24A1Q17RW2 1714 aa20.56■□□□□ 0.88
LINC01248-201ENST00000458264 CYP27B1O15528 508 aa20.56■□□□□ 0.88
LINC01248-201ENST00000458264 COL23A1Q86Y22 540 aaPredicted RBP20.56■□□□□ 0.88
LINC01248-201ENST00000458264 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
LINC01248-201ENST00000458264 MPRIPQ6WCQ1 1025 aa20.55■□□□□ 0.88
LINC01248-201ENST00000458264 CLSPNQ9HAW4 1339 aa20.54■□□□□ 0.88
LINC01248-201ENST00000458264 FLAD1Q8NFF5 587 aa20.54■□□□□ 0.88
LINC01248-201ENST00000458264 SMARCC1Q92922 1105 aaPredicted RBP20.54■□□□□ 0.88
LINC01248-201ENST00000458264 PALLDQ8WX93 1383 aa20.54■□□□□ 0.88
LINC01248-201ENST00000458264 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
LINC01248-201ENST00000458264 TUBGCP6Q96RT7 1819 aa20.53■□□□□ 0.88
LINC01248-201ENST00000458264 SPG7Q9UQ90 795 aa20.53■□□□□ 0.88
LINC01248-201ENST00000458264 NCAPD2Q15021 1401 aa20.53■□□□□ 0.88
LINC01248-201ENST00000458264 NKX1-1Q15270 411 aaPredicted RBP20.52■□□□□ 0.88
LINC01248-201ENST00000458264 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
LINC01248-201ENST00000458264 NLGN2Q8NFZ4 835 aa20.51■□□□□ 0.87
LINC01248-201ENST00000458264 EYA1Q99502 592 aa20.5■□□□□ 0.87
LINC01248-201ENST00000458264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.5■□□□□ 0.87
LINC01248-201ENST00000458264 PIGBQ92521 554 aa20.49■□□□□ 0.87
LINC01248-201ENST00000458264 POLKQ9UBT6 870 aa20.49■□□□□ 0.87
LINC01248-201ENST00000458264 MSL1Q68DK7 614 aa20.48■□□□□ 0.87
LINC01248-201ENST00000458264 CHD4Q14839 1912 aa20.48■□□□□ 0.87
LINC01248-201ENST00000458264 PKD1L3Q7Z443 1732 aa20.47■□□□□ 0.87
LINC01248-201ENST00000458264 AK7Q96M32 723 aa20.47■□□□□ 0.87
LINC01248-201ENST00000458264 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
LINC01248-201ENST00000458264 PCGF6Q9BYE7 350 aa20.47■□□□□ 0.87
LINC01248-201ENST00000458264 C5P01031 1676 aa20.47■□□□□ 0.87
LINC01248-201ENST00000458264 GRIN3BO60391 1043 aa20.46■□□□□ 0.87
LINC01248-201ENST00000458264 UTRNP46939 3433 aa20.46■□□□□ 0.87
LINC01248-201ENST00000458264 ANKRD26Q9UPS8 1709 aa20.46■□□□□ 0.87
LINC01248-201ENST00000458264 IFNL2Q8IZJ0 200 aa20.45■□□□□ 0.86
LINC01248-201ENST00000458264 TOGARAM1Q9Y4F4 1720 aa20.44■□□□□ 0.86
LINC01248-201ENST00000458264 TMOD3Q9NYL9 352 aa20.44■□□□□ 0.86
LINC01248-201ENST00000458264 CD2APQ9Y5K6 639 aa20.44■□□□□ 0.86
LINC01248-201ENST00000458264 LOC102724428A0A0B4J2F2 783 aa20.43■□□□□ 0.86
LINC01248-201ENST00000458264 PHKG2P15735 406 aa20.43■□□□□ 0.86
LINC01248-201ENST00000458264 SIK1P57059 783 aa20.43■□□□□ 0.86
LINC01248-201ENST00000458264 EIF4G2P78344 907 aaKnown RBP eCLIP20.43■□□□□ 0.86
LINC01248-201ENST00000458264 EIF4A2Q14240 407 aaKnown RBP20.43■□□□□ 0.86
LINC01248-201ENST00000458264 YBX3P16989 372 aaKnown RBP eCLIP20.42■□□□□ 0.86
LINC01248-201ENST00000458264 TNNT2P45379 298 aaPredicted RBP20.42■□□□□ 0.86
LINC01248-201ENST00000458264 PLEKHG2Q9H7P9 1386 aa20.42■□□□□ 0.86
LINC01248-201ENST00000458264 C4BP0C0L5 1744 aa20.41■□□□□ 0.86
LINC01248-201ENST00000458264 ITGB4P16144 1822 aa20.41■□□□□ 0.86
LINC01248-201ENST00000458264 C1QTNF8P60827 252 aa20.41■□□□□ 0.86
LINC01248-201ENST00000458264 TAF1LQ8IZX4 1826 aa20.41■□□□□ 0.86
LINC01248-201ENST00000458264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.4■□□□□ 0.86
LINC01248-201ENST00000458264 PHF14O94880 888 aa20.4■□□□□ 0.86
LINC01248-201ENST00000458264 MAP2P11137 1827 aaKnown RBP20.4■□□□□ 0.86
LINC01248-201ENST00000458264 SSFA2P28290 1259 aa20.4■□□□□ 0.86
LINC01248-201ENST00000458264 ASAP1Q9ULH1 1129 aa20.4■□□□□ 0.86
LINC01248-201ENST00000458264 HSPA5P11021 654 aaKnown RBP20.39■□□□□ 0.85
LINC01248-201ENST00000458264 AMIGO3Q86WK7 504 aa20.39■□□□□ 0.85
LINC01248-201ENST00000458264 LINC00116Q8NCU8 138 aa20.39■□□□□ 0.85
LINC01248-201ENST00000458264 PANK3Q9H999 370 aa20.39■□□□□ 0.85
LINC01248-201ENST00000458264 ATP6V1AP38606 617 aa20.38■□□□□ 0.85
LINC01248-201ENST00000458264 IGSF1Q8N6C5 1336 aa20.37■□□□□ 0.85
LINC01248-201ENST00000458264 ATG3Q9NT62 314 aa20.37■□□□□ 0.85
LINC01248-201ENST00000458264 GIGYF1O75420 1035 aaPredicted RBP20.36■□□□□ 0.85
LINC01248-201ENST00000458264 HSP90AB1P08238 724 aaKnown RBP20.36■□□□□ 0.85
LINC01248-201ENST00000458264 ITPK1Q13572 414 aa20.36■□□□□ 0.85
LINC01248-201ENST00000458264 SMIM5Q71RC9 77 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms