RNA–Protein interactions for RNA: ENST00000458153.5

MKLN1-206, Transcript of muskelin 1, human

TSL 2

Gene MKLN1, Length 2,448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKLN1-206	ENST00000458153	FLAD1	Q8NFF5	587 aa		13.02	□□□□□ -0.33
MKLN1-206	ENST00000458153	IP6K1	Q92551	441 aa		13.02	□□□□□ -0.33
MKLN1-206	ENST00000458153	ROCK2	O75116	1388 aa	Known RBP	13.02	□□□□□ -0.33
MKLN1-206	ENST00000458153	UBR3	Q6ZT12	1888 aa		13.01	□□□□□ -0.33
MKLN1-206	ENST00000458153	CCNL1	Q9UK58	526 aa	Predicted RBP	13.01	□□□□□ -0.33
MKLN1-206	ENST00000458153	NSD3	Q9BZ95	1437 aa		13.01	□□□□□ -0.33
MKLN1-206	ENST00000458153	C4B	P0C0L5	1744 aa		13.01	□□□□□ -0.33
MKLN1-206	ENST00000458153	NME9	Q86XW9	330 aa		13.01	□□□□□ -0.33
MKLN1-206	ENST00000458153	RTL1	A6NKG5	1358 aa		13.01	□□□□□ -0.33
MKLN1-206	ENST00000458153	KIF13B	Q9NQT8	1826 aa		13.01	□□□□□ -0.33
MKLN1-206	ENST00000458153	COL23A1	Q86Y22	540 aa	Predicted RBP	13	□□□□□ -0.33
MKLN1-206	ENST00000458153	MEGF6	O75095	1541 aa		13	□□□□□ -0.33
MKLN1-206	ENST00000458153	USP47	Q96K76	1375 aa		13	□□□□□ -0.33
MKLN1-206	ENST00000458153	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13	□□□□□ -0.33
MKLN1-206	ENST00000458153	CGNL1	Q0VF96	1302 aa		12.99	□□□□□ -0.33
MKLN1-206	ENST00000458153	PRIM1	P49642	420 aa	Known RBP	12.99	□□□□□ -0.33
MKLN1-206	ENST00000458153	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.99	□□□□□ -0.33	1e-6	■■■□□ 15.3
MKLN1-206	ENST00000458153	DDX54	Q8TDD1	881 aa	Known RBP	12.99	□□□□□ -0.33
MKLN1-206	ENST00000458153	PUS7	Q96PZ0	661 aa	Known RBP	12.98	□□□□□ -0.33
MKLN1-206	ENST00000458153	ITGB4	P16144	1822 aa		12.98	□□□□□ -0.33
MKLN1-206	ENST00000458153	PKD1L3	Q7Z443	1732 aa		12.98	□□□□□ -0.33
MKLN1-206	ENST00000458153	KIAA1551	Q9HCM1	1747 aa		12.98	□□□□□ -0.33
MKLN1-206	ENST00000458153	WDR90	Q96KV7	1748 aa		12.97	□□□□□ -0.33
MKLN1-206	ENST00000458153	APLP1	P51693	650 aa		12.97	□□□□□ -0.33
MKLN1-206	ENST00000458153	ZCRB1	Q8TBF4	217 aa	Known RBP	12.97	□□□□□ -0.33
MKLN1-206	ENST00000458153	L3MBTL2	Q969R5	705 aa		12.97	□□□□□ -0.33
MKLN1-206	ENST00000458153		A0A1W2PP64	1363 aa		12.96	□□□□□ -0.33
MKLN1-206	ENST00000458153	SYTL4	Q96C24	671 aa	Predicted RBP	12.96	□□□□□ -0.33
MKLN1-206	ENST00000458153	MAP2	P11137	1827 aa	Known RBP	12.96	□□□□□ -0.34
MKLN1-206	ENST00000458153	TERF2IP	Q9NYB0	399 aa		12.96	□□□□□ -0.34
MKLN1-206	ENST00000458153	MSH5	O43196	834 aa		12.95	□□□□□ -0.34
MKLN1-206	ENST00000458153	KCNQ4	P56696	695 aa		12.95	□□□□□ -0.34
MKLN1-206	ENST00000458153	KIF3C	O14782	793 aa		12.94	□□□□□ -0.34
MKLN1-206	ENST00000458153	MSL1	Q68DK7	614 aa		12.94	□□□□□ -0.34
MKLN1-206	ENST00000458153	IGSF1	Q8N6C5	1336 aa		12.94	□□□□□ -0.34
MKLN1-206	ENST00000458153	PALLD	Q8WX93	1383 aa		12.93	□□□□□ -0.34
MKLN1-206	ENST00000458153	HOXC9	P31274	260 aa		12.93	□□□□□ -0.34
MKLN1-206	ENST00000458153	SMG6	Q86US8	1419 aa	Known RBP	12.93	□□□□□ -0.34
MKLN1-206	ENST00000458153	MAP3K19	Q56UN5	1328 aa		12.92	□□□□□ -0.34
MKLN1-206	ENST00000458153	ZNF831	Q5JPB2	1677 aa		12.92	□□□□□ -0.34
MKLN1-206	ENST00000458153	BRCA1	P38398	1863 aa	Known RBP	12.92	□□□□□ -0.34
MKLN1-206	ENST00000458153	PCDH11X	Q9BZA7	1347 aa		12.92	□□□□□ -0.34
MKLN1-206	ENST00000458153	PCDH11Y	Q9BZA8	1340 aa		12.92	□□□□□ -0.34
MKLN1-206	ENST00000458153	KIF20B	Q96Q89	1820 aa		12.92	□□□□□ -0.34
MKLN1-206	ENST00000458153	SMARCC1	Q92922	1105 aa	Predicted RBP	12.91	□□□□□ -0.34
MKLN1-206	ENST00000458153	ARFGEF1	Q9Y6D6	1849 aa		12.91	□□□□□ -0.34
MKLN1-206	ENST00000458153	LTV1	Q96GA3	475 aa	Predicted RBP	12.9	□□□□□ -0.34
MKLN1-206	ENST00000458153	ZNF526	Q8TF50	670 aa	Predicted RBP	12.9	□□□□□ -0.34
MKLN1-206	ENST00000458153	COG3	Q96JB2	828 aa		12.9	□□□□□ -0.34
MKLN1-206	ENST00000458153	KIF24	Q5T7B8	1368 aa		12.9	□□□□□ -0.35
MKLN1-206	ENST00000458153	NCAPD2	Q15021	1401 aa		12.89	□□□□□ -0.35
MKLN1-206	ENST00000458153	C10orf71	Q711Q0	1435 aa		12.89	□□□□□ -0.35
MKLN1-206	ENST00000458153	SSFA2	P28290	1259 aa		12.89	□□□□□ -0.35
MKLN1-206	ENST00000458153	TMC1	Q8TDI8	760 aa		12.89	□□□□□ -0.35
MKLN1-206	ENST00000458153	AK7	Q96M32	723 aa		12.89	□□□□□ -0.35
MKLN1-206	ENST00000458153	PXDNL	A1KZ92	1463 aa		12.89	□□□□□ -0.35
MKLN1-206	ENST00000458153	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.89	□□□□□ -0.35
MKLN1-206	ENST00000458153	AMPH	P49418	695 aa		12.89	□□□□□ -0.35
MKLN1-206	ENST00000458153	SLC12A5	Q9H2X9	1139 aa		12.89	□□□□□ -0.35
MKLN1-206	ENST00000458153	ANKRD26	Q9UPS8	1709 aa		12.89	□□□□□ -0.35
MKLN1-206	ENST00000458153	DNAJC5G	Q8N7S2	189 aa		12.88	□□□□□ -0.35
MKLN1-206	ENST00000458153	PLEKHG2	Q9H7P9	1386 aa		12.88	□□□□□ -0.35
MKLN1-206	ENST00000458153	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.88	□□□□□ -0.35
MKLN1-206	ENST00000458153	TOMM70	O94826	608 aa		12.88	□□□□□ -0.35
MKLN1-206	ENST00000458153	TAT	P17735	454 aa	Predicted RBP	12.88	□□□□□ -0.35
MKLN1-206	ENST00000458153	RAPGEF4	Q8WZA2	1011 aa		12.88	□□□□□ -0.35
MKLN1-206	ENST00000458153	C4A	P0C0L4	1744 aa		12.87	□□□□□ -0.35
MKLN1-206	ENST00000458153	INSR	P06213	1382 aa		12.87	□□□□□ -0.35
MKLN1-206	ENST00000458153	RBM46	Q8TBY0	533 aa	Known RBP	12.86	□□□□□ -0.35
MKLN1-206	ENST00000458153	NBPF6	Q5VWK0	638 aa		12.85	□□□□□ -0.35
MKLN1-206	ENST00000458153	JMY	Q8N9B5	988 aa		12.85	□□□□□ -0.35
MKLN1-206	ENST00000458153	NBPF4	Q96M43	638 aa		12.85	□□□□□ -0.35
MKLN1-206	ENST00000458153	COL5A3	P25940	1745 aa	Predicted RBP	12.85	□□□□□ -0.35
MKLN1-206	ENST00000458153	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.84	□□□□□ -0.35
MKLN1-206	ENST00000458153	SLC24A1	O60721	1099 aa		12.84	□□□□□ -0.35
MKLN1-206	ENST00000458153	CARD11	Q9BXL7	1154 aa		12.84	□□□□□ -0.35
MKLN1-206	ENST00000458153	UTRN	P46939	3433 aa		12.84	□□□□□ -0.35
MKLN1-206	ENST00000458153	FLT4	P35916	1363 aa		12.84	□□□□□ -0.35
MKLN1-206	ENST00000458153	TGFB2	P61812	414 aa		12.83	□□□□□ -0.35
MKLN1-206	ENST00000458153	FSTL1	Q12841	308 aa		12.83	□□□□□ -0.36
MKLN1-206	ENST00000458153	NKX1-1	Q15270	411 aa	Predicted RBP	12.83	□□□□□ -0.36
MKLN1-206	ENST00000458153	AMIGO3	Q86WK7	504 aa		12.82	□□□□□ -0.36
MKLN1-206	ENST00000458153	KLRG1	Q96E93	195 aa		12.82	□□□□□ -0.36
MKLN1-206	ENST00000458153	CYP27B1	O15528	508 aa		12.81	□□□□□ -0.36
MKLN1-206	ENST00000458153	LINC00116	Q8NCU8	138 aa		12.81	□□□□□ -0.36
MKLN1-206	ENST00000458153	MPRIP	Q6WCQ1	1025 aa		12.81	□□□□□ -0.36
MKLN1-206	ENST00000458153	USHBP1	Q8N6Y0	703 aa		12.81	□□□□□ -0.36
MKLN1-206	ENST00000458153	KDR	P35968	1356 aa		12.81	□□□□□ -0.36
MKLN1-206	ENST00000458153	LOC102724428	A0A0B4J2F2	783 aa		12.8	□□□□□ -0.36
MKLN1-206	ENST00000458153	PHF14	O94880	888 aa		12.8	□□□□□ -0.36
MKLN1-206	ENST00000458153	SIK1	P57059	783 aa		12.8	□□□□□ -0.36
MKLN1-206	ENST00000458153	PIGB	Q92521	554 aa		12.8	□□□□□ -0.36
MKLN1-206	ENST00000458153	SIN3A	Q96ST3	1273 aa		12.79	□□□□□ -0.36
MKLN1-206	ENST00000458153	SBF1	O95248	1867 aa		12.79	□□□□□ -0.36
MKLN1-206	ENST00000458153	CEP350	Q5VT06	3117 aa		12.78	□□□□□ -0.36
MKLN1-206	ENST00000458153	MMP10	P09238	476 aa		12.78	□□□□□ -0.36
MKLN1-206	ENST00000458153	ADRA2B	P18089	450 aa		12.78	□□□□□ -0.36
MKLN1-206	ENST00000458153	PRELP	P51888	382 aa		12.78	□□□□□ -0.36
MKLN1-206	ENST00000458153	RRS1	Q15050	365 aa	Known RBP	12.78	□□□□□ -0.36
MKLN1-206	ENST00000458153	TESK2	Q96S53	571 aa		12.78	□□□□□ -0.36

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