RNA–Protein interactions for RNA: ENST00000457723.1

SLC6A8-206, Transcript of solute carrier family 6 member 8, humanhuman

TSL 5

Gene SLC6A8, Length 266 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-206ENST00000457723 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
SLC6A8-206ENST00000457723 AKT1S1Q96B36 256 aa17.39■□□□□ 0.37
SLC6A8-206ENST00000457723 SYT17Q9BSW7 474 aa17.39■□□□□ 0.37
SLC6A8-206ENST00000457723 FHDC1Q9C0D6 1143 aaPredicted RBP17.39■□□□□ 0.37
SLC6A8-206ENST00000457723 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.37
SLC6A8-206ENST00000457723 TRIM26Q12899 539 aaPredicted RBP17.37■□□□□ 0.37
SLC6A8-206ENST00000457723 RRS1Q15050 365 aaKnown RBP17.37■□□□□ 0.37
SLC6A8-206ENST00000457723 NBPF6Q5VWK0 638 aa17.37■□□□□ 0.37
SLC6A8-206ENST00000457723 ZCRB1Q8TBF4 217 aaKnown RBP17.37■□□□□ 0.37
SLC6A8-206ENST00000457723 NBPF4Q96M43 638 aa17.37■□□□□ 0.37
SLC6A8-206ENST00000457723 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
SLC6A8-206ENST00000457723 MAP3K5Q99683 1374 aa17.37■□□□□ 0.37
SLC6A8-206ENST00000457723 PRIM1P49642 420 aaKnown RBP17.36■□□□□ 0.37
SLC6A8-206ENST00000457723 ARXQ96QS3 562 aa17.35■□□□□ 0.37
SLC6A8-206ENST00000457723 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
SLC6A8-206ENST00000457723 CHD4Q14839 1912 aa17.35■□□□□ 0.37
SLC6A8-206ENST00000457723 INSRP06213 1382 aa17.34■□□□□ 0.37
SLC6A8-206ENST00000457723 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
SLC6A8-206ENST00000457723 KIF24Q5T7B8 1368 aa17.34■□□□□ 0.37
SLC6A8-206ENST00000457723 SLC16A10Q8TF71 515 aa17.34■□□□□ 0.37
SLC6A8-206ENST00000457723 PNPLA7Q6ZV29 1317 aa17.33■□□□□ 0.36
SLC6A8-206ENST00000457723 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
SLC6A8-206ENST00000457723 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
SLC6A8-206ENST00000457723 SYTL4Q96C24 671 aaPredicted RBP17.32■□□□□ 0.36
SLC6A8-206ENST00000457723 CARD14Q9BXL6 1004 aa17.32■□□□□ 0.36
SLC6A8-206ENST00000457723 ANKRD26Q9UPS8 1709 aa17.32■□□□□ 0.36
SLC6A8-206ENST00000457723 FLT4P35916 1363 aa17.31■□□□□ 0.36
SLC6A8-206ENST00000457723 KCNQ4P56696 695 aa17.31■□□□□ 0.36
SLC6A8-206ENST00000457723 USHBP1Q8N6Y0 703 aa17.31■□□□□ 0.36
SLC6A8-206ENST00000457723 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
SLC6A8-206ENST00000457723 RAPGEF4Q8WZA2 1011 aa17.29■□□□□ 0.36
SLC6A8-206ENST00000457723 TFCP2L1Q9NZI6 479 aa17.29■□□□□ 0.36
SLC6A8-206ENST00000457723 TIMELESSQ9UNS1 1208 aa17.29■□□□□ 0.36
SLC6A8-206ENST00000457723 NCAPD2Q15021 1401 aa17.29■□□□□ 0.36
SLC6A8-206ENST00000457723 ITGB4P16144 1822 aa17.28■□□□□ 0.36
SLC6A8-206ENST00000457723 TAF1LQ8IZX4 1826 aa17.28■□□□□ 0.36
SLC6A8-206ENST00000457723 TOGARAM1Q9Y4F4 1720 aa17.28■□□□□ 0.36
SLC6A8-206ENST00000457723 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
SLC6A8-206ENST00000457723 C5P01031 1676 aa17.28■□□□□ 0.36
SLC6A8-206ENST00000457723 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
SLC6A8-206ENST00000457723 TATP17735 454 aaPredicted RBP17.27■□□□□ 0.36
SLC6A8-206ENST00000457723 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.35
SLC6A8-206ENST00000457723 PCDH11XQ9BZA7 1347 aa17.26■□□□□ 0.35
SLC6A8-206ENST00000457723 PCDH11YQ9BZA8 1340 aa17.26■□□□□ 0.35
SLC6A8-206ENST00000457723 POLD1P28340 1107 aa17.25■□□□□ 0.35
SLC6A8-206ENST00000457723 ZNF784Q8NCA9 323 aaPredicted RBP17.25■□□□□ 0.35
SLC6A8-206ENST00000457723 CYP27B1O15528 508 aa17.24■□□□□ 0.35
SLC6A8-206ENST00000457723 EMILIN1Q9Y6C2 1016 aa17.24■□□□□ 0.35
SLC6A8-206ENST00000457723 COL23A1Q86Y22 540 aaPredicted RBP17.23■□□□□ 0.35
SLC6A8-206ENST00000457723 WASHC2AQ641Q2 1341 aa17.22■□□□□ 0.35
SLC6A8-206ENST00000457723 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
SLC6A8-206ENST00000457723 NKX1-1Q15270 411 aaPredicted RBP17.22■□□□□ 0.35
SLC6A8-206ENST00000457723 PALLDQ8WX93 1383 aa17.21■□□□□ 0.35
SLC6A8-206ENST00000457723 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
SLC6A8-206ENST00000457723 MPRIPQ6WCQ1 1025 aa17.2■□□□□ 0.34
SLC6A8-206ENST00000457723 C4BP0C0L5 1744 aa17.2■□□□□ 0.34
SLC6A8-206ENST00000457723 UBR3Q6ZT12 1888 aa17.19■□□□□ 0.34
SLC6A8-206ENST00000457723 NLGN2Q8NFZ4 835 aa17.19■□□□□ 0.34
SLC6A8-206ENST00000457723 GPR162Q16538 588 aa17.18■□□□□ 0.34
SLC6A8-206ENST00000457723 EYA1Q99502 592 aa17.18■□□□□ 0.34
SLC6A8-206ENST00000457723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.34
SLC6A8-206ENST00000457723 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
SLC6A8-206ENST00000457723 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
SLC6A8-206ENST00000457723 KLHL34Q8N239 644 aa17.17■□□□□ 0.34
SLC6A8-206ENST00000457723 PIGBQ92521 554 aa17.17■□□□□ 0.34
SLC6A8-206ENST00000457723 FLAD1Q8NFF5 587 aa17.16■□□□□ 0.34
SLC6A8-206ENST00000457723 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
SLC6A8-206ENST00000457723 SPG7Q9UQ90 795 aa17.16■□□□□ 0.34
SLC6A8-206ENST00000457723 MSH5O43196 834 aa17.15■□□□□ 0.34
SLC6A8-206ENST00000457723 AMIGO3Q86WK7 504 aa17.15■□□□□ 0.34
SLC6A8-206ENST00000457723 PLEKHG2Q9H7P9 1386 aa17.15■□□□□ 0.34
SLC6A8-206ENST00000457723 MSL1Q68DK7 614 aa17.13■□□□□ 0.33
SLC6A8-206ENST00000457723 PHKG2P15735 406 aa17.12■□□□□ 0.33
SLC6A8-206ENST00000457723 YBX3P16989 372 aaKnown RBP eCLIP17.12■□□□□ 0.332e-27■□□□□ 8.9
SLC6A8-206ENST00000457723 EIF4A2Q14240 407 aaKnown RBP17.12■□□□□ 0.33
SLC6A8-206ENST00000457723 CD2APQ9Y5K6 639 aa17.12■□□□□ 0.33
SLC6A8-206ENST00000457723 ZNF831Q5JPB2 1677 aa17.11■□□□□ 0.33
SLC6A8-206ENST00000457723 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
SLC6A8-206ENST00000457723 SIK1P57059 783 aa17.11■□□□□ 0.33
SLC6A8-206ENST00000457723 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
SLC6A8-206ENST00000457723 GRIN3BO60391 1043 aa17.1■□□□□ 0.33
SLC6A8-206ENST00000457723 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
SLC6A8-206ENST00000457723 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
SLC6A8-206ENST00000457723 AK7Q96M32 723 aa17.1■□□□□ 0.33
SLC6A8-206ENST00000457723 PCGF6Q9BYE7 350 aa17.1■□□□□ 0.33
SLC6A8-206ENST00000457723 TMOD3Q9NYL9 352 aa17.1■□□□□ 0.33
SLC6A8-206ENST00000457723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.09■□□□□ 0.33
SLC6A8-206ENST00000457723 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
SLC6A8-206ENST00000457723 IGSF1Q8N6C5 1336 aa17.09■□□□□ 0.33
SLC6A8-206ENST00000457723 SSFA2P28290 1259 aa17.08■□□□□ 0.32
SLC6A8-206ENST00000457723 C1QTNF8P60827 252 aa17.08■□□□□ 0.32
SLC6A8-206ENST00000457723 EIF4G2P78344 907 aaKnown RBP eCLIP17.08■□□□□ 0.32
SLC6A8-206ENST00000457723 PANK3Q9H999 370 aa17.08■□□□□ 0.32
SLC6A8-206ENST00000457723 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
SLC6A8-206ENST00000457723 HSPA5P11021 654 aaKnown RBP17.07■□□□□ 0.32
SLC6A8-206ENST00000457723 TNNT2P45379 298 aaPredicted RBP17.07■□□□□ 0.32
SLC6A8-206ENST00000457723 ITPK1Q13572 414 aa17.07■□□□□ 0.32
SLC6A8-206ENST00000457723 SMIM5Q71RC9 77 aa17.07■□□□□ 0.32
SLC6A8-206ENST00000457723 POLR3GLQ9BT43 218 aa17.07■□□□□ 0.32
SLC6A8-206ENST00000457723 PHF14O94880 888 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms