RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 HSP90AB2PQ58FF8 381 aa18.54■□□□□ 0.56
SMARCA2-216ENST00000457226 SYTL4Q96C24 671 aaPredicted RBP18.54■□□□□ 0.56
SMARCA2-216ENST00000457226 MEGF6O75095 1541 aa18.54■□□□□ 0.56
SMARCA2-216ENST00000457226 CASZ1Q86V15 1759 aa18.53■□□□□ 0.56
SMARCA2-216ENST00000457226 MTFR1LQ9H019 292 aa18.52■□□□□ 0.56
SMARCA2-216ENST00000457226 PCDH11XQ9BZA7 1347 aa18.51■□□□□ 0.55
SMARCA2-216ENST00000457226 PCDH11YQ9BZA8 1340 aa18.51■□□□□ 0.55
SMARCA2-216ENST00000457226 BTAF1O14981 1849 aa18.51■□□□□ 0.55
SMARCA2-216ENST00000457226 PRIM1P49642 420 aaKnown RBP18.51■□□□□ 0.55
SMARCA2-216ENST00000457226 ZBTB7AO95365 584 aa18.5■□□□□ 0.55
SMARCA2-216ENST00000457226 POLR3GLQ9BT43 218 aa18.5■□□□□ 0.55
SMARCA2-216ENST00000457226 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
SMARCA2-216ENST00000457226 PPM1GO15355 546 aaPredicted RBP18.49■□□□□ 0.55
SMARCA2-216ENST00000457226 USHBP1Q8N6Y0 703 aa18.49■□□□□ 0.55
SMARCA2-216ENST00000457226 EMILIN1Q9Y6C2 1016 aa18.49■□□□□ 0.55
SMARCA2-216ENST00000457226 PAPPAQ13219 1627 aa18.49■□□□□ 0.55
SMARCA2-216ENST00000457226 HSPA5P11021 654 aaKnown RBP18.48■□□□□ 0.55
SMARCA2-216ENST00000457226 PTGER2P43116 358 aa18.47■□□□□ 0.55
SMARCA2-216ENST00000457226 SLC16A10Q8TF71 515 aa18.47■□□□□ 0.55
SMARCA2-216ENST00000457226 PDGFDQ9GZP0 370 aaPredicted RBP18.47■□□□□ 0.55
SMARCA2-216ENST00000457226 LRRC4BQ9NT99 713 aa18.47■□□□□ 0.55
SMARCA2-216ENST00000457226 NSD2O96028 1365 aa18.46■□□□□ 0.55
SMARCA2-216ENST00000457226 SPG7Q9UQ90 795 aa18.46■□□□□ 0.55
SMARCA2-216ENST00000457226 ATF5Q9Y2D1 282 aaPredicted RBP18.46■□□□□ 0.55
SMARCA2-216ENST00000457226 DOT1LQ8TEK3 1739 aa18.46■□□□□ 0.55
SMARCA2-216ENST00000457226 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
SMARCA2-216ENST00000457226 PLEKHG2Q9H7P9 1386 aa18.45■□□□□ 0.54
SMARCA2-216ENST00000457226 AKT1S1Q96B36 256 aa18.45■□□□□ 0.54
SMARCA2-216ENST00000457226 NCAPD2Q15021 1401 aa18.45■□□□□ 0.54
SMARCA2-216ENST00000457226 ANKRD26Q9UPS8 1709 aa18.45■□□□□ 0.54
SMARCA2-216ENST00000457226 SHANK3Q9BYB0 1731 aa18.44■□□□□ 0.54
SMARCA2-216ENST00000457226 ZNF827Q17R98 1081 aa18.44■□□□□ 0.54
SMARCA2-216ENST00000457226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.44■□□□□ 0.54
SMARCA2-216ENST00000457226 POLKQ9UBT6 870 aa18.44■□□□□ 0.54
SMARCA2-216ENST00000457226 PANK3Q9H999 370 aa18.43■□□□□ 0.54
SMARCA2-216ENST00000457226 TFCP2L1Q9NZI6 479 aa18.43■□□□□ 0.54
SMARCA2-216ENST00000457226 CCNL1Q9UK58 526 aaPredicted RBP18.43■□□□□ 0.54
SMARCA2-216ENST00000457226 SMARCC1Q92922 1105 aaPredicted RBP18.41■□□□□ 0.54
SMARCA2-216ENST00000457226 SGIP1Q9BQI5 828 aa18.41■□□□□ 0.54
SMARCA2-216ENST00000457226 CYP27B1O15528 508 aa18.4■□□□□ 0.54
SMARCA2-216ENST00000457226 POLD1P28340 1107 aa18.4■□□□□ 0.54
SMARCA2-216ENST00000457226 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
SMARCA2-216ENST00000457226 ARXQ96QS3 562 aa18.4■□□□□ 0.54
SMARCA2-216ENST00000457226 EYA1Q99502 592 aa18.4■□□□□ 0.54
SMARCA2-216ENST00000457226 TNNT2P45379 298 aaPredicted RBP18.39■□□□□ 0.53
SMARCA2-216ENST00000457226 MPRIPQ6WCQ1 1025 aa18.39■□□□□ 0.53
SMARCA2-216ENST00000457226 KNSTRNQ9Y448 316 aa18.39■□□□□ 0.53
SMARCA2-216ENST00000457226 LY75O60449 1722 aa18.39■□□□□ 0.53
SMARCA2-216ENST00000457226 MAP3K5Q99683 1374 aa18.39■□□□□ 0.53
SMARCA2-216ENST00000457226 QSER1Q2KHR3 1735 aa18.38■□□□□ 0.53
SMARCA2-216ENST00000457226 PKD1L3Q7Z443 1732 aa18.38■□□□□ 0.53
SMARCA2-216ENST00000457226 SYT17Q9BSW7 474 aa18.38■□□□□ 0.53
SMARCA2-216ENST00000457226 FHDC1Q9C0D6 1143 aaPredicted RBP18.38■□□□□ 0.53
SMARCA2-216ENST00000457226 PNPLA7Q6ZV29 1317 aa18.38■□□□□ 0.53
SMARCA2-216ENST00000457226 MORC1Q86VD1 984 aa18.37■□□□□ 0.53
SMARCA2-216ENST00000457226 FLAD1Q8NFF5 587 aa18.37■□□□□ 0.53
SMARCA2-216ENST00000457226 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
SMARCA2-216ENST00000457226 YY1P25490 414 aa18.36■□□□□ 0.53
SMARCA2-216ENST00000457226 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
SMARCA2-216ENST00000457226 IFNL2Q8IZJ0 200 aa18.36■□□□□ 0.53
SMARCA2-216ENST00000457226 KAT6BQ8WYB5 2073 aa18.35■□□□□ 0.53
SMARCA2-216ENST00000457226 KCNQ4P56696 695 aa18.35■□□□□ 0.53
SMARCA2-216ENST00000457226 TMOD3Q9NYL9 352 aa18.34■□□□□ 0.53
SMARCA2-216ENST00000457226 MAP2P11137 1827 aaKnown RBP18.34■□□□□ 0.53
SMARCA2-216ENST00000457226 IGSF1Q8N6C5 1336 aa18.33■□□□□ 0.53
SMARCA2-216ENST00000457226 HSP90AB1P08238 724 aaKnown RBP18.33■□□□□ 0.52
SMARCA2-216ENST00000457226 PHKG2P15735 406 aa18.33■□□□□ 0.52
SMARCA2-216ENST00000457226 MSH5O43196 834 aa18.32■□□□□ 0.52
SMARCA2-216ENST00000457226 AMOTQ4VCS5 1084 aa18.32■□□□□ 0.52
SMARCA2-216ENST00000457226 PIGBQ92521 554 aa18.32■□□□□ 0.52
SMARCA2-216ENST00000457226 PLEKHO1Q53GL0 409 aaPredicted RBP18.31■□□□□ 0.52
SMARCA2-216ENST00000457226 C5P01031 1676 aa18.29■□□□□ 0.52
SMARCA2-216ENST00000457226 COL23A1Q86Y22 540 aaPredicted RBP18.29■□□□□ 0.52
SMARCA2-216ENST00000457226 DCAF5Q96JK2 942 aa18.29■□□□□ 0.52
SMARCA2-216ENST00000457226 AK7Q96M32 723 aa18.29■□□□□ 0.52
SMARCA2-216ENST00000457226 TOGARAM1Q9Y4F4 1720 aa18.29■□□□□ 0.52
SMARCA2-216ENST00000457226 KIF7Q2M1P5 1343 aa18.28■□□□□ 0.52
SMARCA2-216ENST00000457226 ERVV-2B6SEH9 535 aa18.28■□□□□ 0.52
SMARCA2-216ENST00000457226 COL24A1Q17RW2 1714 aa18.27■□□□□ 0.52
SMARCA2-216ENST00000457226 LOC102724428A0A0B4J2F2 783 aa18.27■□□□□ 0.52
SMARCA2-216ENST00000457226 SIK1P57059 783 aa18.27■□□□□ 0.52
SMARCA2-216ENST00000457226 AMER1Q5JTC6 1135 aaPredicted RBP18.26■□□□□ 0.51
SMARCA2-216ENST00000457226 KLHL34Q8N239 644 aa18.26■□□□□ 0.51
SMARCA2-216ENST00000457226 C4BP0C0L5 1744 aa18.24■□□□□ 0.51
SMARCA2-216ENST00000457226 ITGB4P16144 1822 aa18.24■□□□□ 0.51
SMARCA2-216ENST00000457226 TUBGCP6Q96RT7 1819 aa18.24■□□□□ 0.51
SMARCA2-216ENST00000457226 SSFA2P28290 1259 aa18.24■□□□□ 0.51
SMARCA2-216ENST00000457226 GPR162Q16538 588 aa18.24■□□□□ 0.51
SMARCA2-216ENST00000457226 C1orf141Q5JVX7 400 aa18.24■□□□□ 0.51
SMARCA2-216ENST00000457226 ZNF530Q6P9A1 599 aaPredicted RBP18.24■□□□□ 0.51
SMARCA2-216ENST00000457226 KDRP35968 1356 aa18.23■□□□□ 0.51
SMARCA2-216ENST00000457226 ATP6V1AP38606 617 aa18.23■□□□□ 0.51
SMARCA2-216ENST00000457226 ASAP1Q9ULH1 1129 aa18.23■□□□□ 0.51
SMARCA2-216ENST00000457226 MTHFSP49914 203 aa18.22■□□□□ 0.51
SMARCA2-216ENST00000457226 SULT6B1Q6IMI4 303 aa18.22■□□□□ 0.51
SMARCA2-216ENST00000457226 ATG3Q9NT62 314 aa18.22■□□□□ 0.51
SMARCA2-216ENST00000457226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
SMARCA2-216ENST00000457226 IL13P35225 146 aa18.21■□□□□ 0.51
SMARCA2-216ENST00000457226 CABP4P57796 275 aa18.21■□□□□ 0.51
SMARCA2-216ENST00000457226 CD2APQ9Y5K6 639 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms