RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 MARCH10Q8NA82 808 aaPredicted RBP18.99■□□□□ 0.63
SMPD4-215ENST00000457039 PKD1L3Q7Z443 1732 aa18.98■□□□□ 0.63
SMPD4-215ENST00000457039 FAM182BQ5T319 152 aa18.98■□□□□ 0.63
SMPD4-215ENST00000457039 BCL9O00512 1426 aa18.98■□□□□ 0.63
SMPD4-215ENST00000457039 ZCRB1Q8TBF4 217 aaKnown RBP18.97■□□□□ 0.63
SMPD4-215ENST00000457039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMPD4-215ENST00000457039 U2SURPO15042 1029 aaKnown RBP18.95■□□□□ 0.62
SMPD4-215ENST00000457039 ANP32CO43423 234 aa18.95■□□□□ 0.62
SMPD4-215ENST00000457039 HMOX1P09601 288 aa18.95■□□□□ 0.62
SMPD4-215ENST00000457039 FAM196AQ6ZSG2 479 aa18.95■□□□□ 0.62
SMPD4-215ENST00000457039 NUDCQ9Y266 331 aa18.95■□□□□ 0.62
SMPD4-215ENST00000457039 SOCS7O14512 581 aa18.94■□□□□ 0.62
SMPD4-215ENST00000457039 UPF1Q92900 1129 aaKnown RBP eCLIP18.93■□□□□ 0.62
SMPD4-215ENST00000457039 CYP27B1O15528 508 aa18.92■□□□□ 0.62
SMPD4-215ENST00000457039 DDX54Q8TDD1 881 aaKnown RBP18.92■□□□□ 0.62
SMPD4-215ENST00000457039 SPG7Q9UQ90 795 aa18.92■□□□□ 0.62
SMPD4-215ENST00000457039 PCDH11XQ9BZA7 1347 aa18.92■□□□□ 0.62
SMPD4-215ENST00000457039 PCDH11YQ9BZA8 1340 aa18.92■□□□□ 0.62
SMPD4-215ENST00000457039 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
SMPD4-215ENST00000457039 U2AF1L5P0DN76 240 aaPredicted RBP18.9■□□□□ 0.62
SMPD4-215ENST00000457039 U2AF1Q01081 240 aaKnown RBP eCLIP18.9■□□□□ 0.62
SMPD4-215ENST00000457039 AMOTQ4VCS5 1084 aa18.9■□□□□ 0.62
SMPD4-215ENST00000457039 PLEKHO1Q53GL0 409 aaPredicted RBP18.9■□□□□ 0.62
SMPD4-215ENST00000457039 SBF2Q86WG5 1849 aa18.89■□□□□ 0.61
SMPD4-215ENST00000457039 FCHSD2O94868 740 aa18.88■□□□□ 0.61
SMPD4-215ENST00000457039 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
SMPD4-215ENST00000457039 CCDC184Q52MB2 194 aa18.88■□□□□ 0.61
SMPD4-215ENST00000457039 PHKG2P15735 406 aa18.87■□□□□ 0.61
SMPD4-215ENST00000457039 PRKAR2BP31323 418 aa18.87■□□□□ 0.61
SMPD4-215ENST00000457039 CCDC125Q86Z20 511 aa18.87■□□□□ 0.61
SMPD4-215ENST00000457039 IFNL2Q8IZJ0 200 aa18.87■□□□□ 0.61
SMPD4-215ENST00000457039 TNS1Q9HBL0 1735 aaKnown RBP18.86■□□□□ 0.61
SMPD4-215ENST00000457039 TRIM37O94972 964 aa18.86■□□□□ 0.61
SMPD4-215ENST00000457039 NHSQ6T4R5 1651 aa18.85■□□□□ 0.61
SMPD4-215ENST00000457039 MTHFSDQ2M296 383 aaKnown RBP18.85■□□□□ 0.61
SMPD4-215ENST00000457039 ZNF530Q6P9A1 599 aaPredicted RBP18.85■□□□□ 0.61
SMPD4-215ENST00000457039 DOT1LQ8TEK3 1739 aa18.84■□□□□ 0.61
SMPD4-215ENST00000457039 TOGARAM1Q9Y4F4 1720 aa18.84■□□□□ 0.61
SMPD4-215ENST00000457039 PTF1AQ7RTS3 328 aa18.84■□□□□ 0.61
SMPD4-215ENST00000457039 PHACTR3Q96KR7 559 aa18.84■□□□□ 0.61
SMPD4-215ENST00000457039 PLEKHF1Q96S99 279 aa18.84■□□□□ 0.61
SMPD4-215ENST00000457039 KCNQ2O43526 872 aa18.83■□□□□ 0.6
SMPD4-215ENST00000457039 ACSBG1Q96GR2 724 aa18.83■□□□□ 0.6
SMPD4-215ENST00000457039 BCL11BQ9C0K0 894 aaPredicted RBP18.83■□□□□ 0.6
SMPD4-215ENST00000457039 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
SMPD4-215ENST00000457039 KDM6AO15550 1401 aaPredicted RBP18.82■□□□□ 0.6
SMPD4-215ENST00000457039 AKAP4Q5JQC9 854 aa18.81■□□□□ 0.6
SMPD4-215ENST00000457039 GAS2L2Q8NHY3 880 aa18.81■□□□□ 0.6
SMPD4-215ENST00000457039 HSP90AB1P08238 724 aaKnown RBP18.8■□□□□ 0.6
SMPD4-215ENST00000457039 WDR43Q15061 677 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMPD4-215ENST00000457039 C1orf141Q5JVX7 400 aa18.8■□□□□ 0.6
SMPD4-215ENST00000457039 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
SMPD4-215ENST00000457039 ADAMTS8Q9UP79 889 aa18.8■□□□□ 0.6
SMPD4-215ENST00000457039 ADAMTS7Q9UKP4 1686 aa18.79■□□□□ 0.6
SMPD4-215ENST00000457039 PRIM1P49642 420 aaKnown RBP18.79■□□□□ 0.6
SMPD4-215ENST00000457039 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
SMPD4-215ENST00000457039 DCAF5Q96JK2 942 aa18.79■□□□□ 0.6
SMPD4-215ENST00000457039 SF3B2Q13435 895 aaKnown RBP18.78■□□□□ 0.6
SMPD4-215ENST00000457039 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
SMPD4-215ENST00000457039 APBA3O96018 575 aa18.77■□□□□ 0.6
SMPD4-215ENST00000457039 DEFB132Q7Z7B7 95 aa18.77■□□□□ 0.6
SMPD4-215ENST00000457039 MAP3K5Q99683 1374 aa18.77■□□□□ 0.6
SMPD4-215ENST00000457039 BTAF1O14981 1849 aa18.77■□□□□ 0.59
SMPD4-215ENST00000457039 BAG6P46379 1132 aa18.76■□□□□ 0.59
SMPD4-215ENST00000457039 MPRIPQ6WCQ1 1025 aa18.76■□□□□ 0.59
SMPD4-215ENST00000457039 ITGB4P16144 1822 aa18.76■□□□□ 0.59
SMPD4-215ENST00000457039 SCN11AQ9UI33 1791 aa18.76■□□□□ 0.59
SMPD4-215ENST00000457039 ERVV-2B6SEH9 535 aa18.75■□□□□ 0.59
SMPD4-215ENST00000457039 PLSCR1O15162 318 aa18.75■□□□□ 0.59
SMPD4-215ENST00000457039 SYTL4Q96C24 671 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-215ENST00000457039 CAMKK2Q96RR4 588 aa18.75■□□□□ 0.59
SMPD4-215ENST00000457039 LGR6Q9HBX8 967 aa18.75■□□□□ 0.59
SMPD4-215ENST00000457039 RGPD3A6NKT7 1758 aaPredicted RBP18.75■□□□□ 0.59
SMPD4-215ENST00000457039 RGPD4Q7Z3J3 1758 aa18.75■□□□□ 0.59
SMPD4-215ENST00000457039 MRC1P22897 1456 aa18.74■□□□□ 0.59
SMPD4-215ENST00000457039 GNAT3A8MTJ3 354 aa18.74■□□□□ 0.59
SMPD4-215ENST00000457039 RNMTO43148 476 aaKnown RBP18.74■□□□□ 0.59
SMPD4-215ENST00000457039 EN1Q05925 392 aaPredicted RBP18.74■□□□□ 0.59
SMPD4-215ENST00000457039 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
SMPD4-215ENST00000457039 NEFMP07197 916 aa18.73■□□□□ 0.59
SMPD4-215ENST00000457039 NFE2L2Q16236 605 aa18.73■□□□□ 0.59
SMPD4-215ENST00000457039 CCDC146Q8IYE0 955 aa18.73■□□□□ 0.59
SMPD4-215ENST00000457039 PIGBQ92521 554 aa18.73■□□□□ 0.59
SMPD4-215ENST00000457039 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
SMPD4-215ENST00000457039 KAT6BQ8WYB5 2073 aa18.72■□□□□ 0.59
SMPD4-215ENST00000457039 CEMIPQ8WUJ3 1361 aa18.72■□□□□ 0.59
SMPD4-215ENST00000457039 CCER2I3L3R5 266 aa18.72■□□□□ 0.59
SMPD4-215ENST00000457039 IL17REQ8NFR9 667 aa18.72■□□□□ 0.59
SMPD4-215ENST00000457039 EZH2Q15910 746 aaKnown RBP18.71■□□□□ 0.59
SMPD4-215ENST00000457039 TMOD3Q9NYL9 352 aa18.71■□□□□ 0.59
SMPD4-215ENST00000457039 VIRMAQ69YN4 1812 aaKnown RBP18.71■□□□□ 0.59
SMPD4-215ENST00000457039 HTATSF1O43719 755 aaKnown RBP18.7■□□□□ 0.58
SMPD4-215ENST00000457039 MIER1Q8N108 512 aa18.7■□□□□ 0.58
SMPD4-215ENST00000457039 SLC52A2Q9HAB3 445 aa18.7■□□□□ 0.58
SMPD4-215ENST00000457039 DLG5Q8TDM6 1919 aa18.7■□□□□ 0.58
SMPD4-215ENST00000457039 RREB1Q92766 1687 aa18.69■□□□□ 0.58
SMPD4-215ENST00000457039 TMPOP42166 694 aaKnown RBP18.69■□□□□ 0.58
SMPD4-215ENST00000457039 CABP4P57796 275 aa18.69■□□□□ 0.58
SMPD4-215ENST00000457039 PROM2Q8N271 834 aa18.69■□□□□ 0.58
SMPD4-215ENST00000457039 NFATC2IPQ8NCF5 419 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms