RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 TMF1P82094 1093 aa30.06■■■□□ 2.4
TMEM56-203ENST00000456991 RRS1Q15050 365 aaKnown RBP30.06■■■□□ 2.4
TMEM56-203ENST00000456991 RTL1A6NKG5 1358 aa30.05■■■□□ 2.4
TMEM56-203ENST00000456991 CGNL1Q0VF96 1302 aa30.05■■■□□ 2.4
TMEM56-203ENST00000456991 NBPF6Q5VWK0 638 aa30.05■■■□□ 2.4
TMEM56-203ENST00000456991 NBPF4Q96M43 638 aa30.05■■■□□ 2.4
TMEM56-203ENST00000456991 FAM208AQ9UK61 1670 aaKnown RBP30.04■■■□□ 2.4
TMEM56-203ENST00000456991 KAT6BQ8WYB5 2073 aa30.04■■■□□ 2.4
TMEM56-203ENST00000456991 GPR162Q16538 588 aa30.04■■■□□ 2.4
TMEM56-203ENST00000456991 GGNBP2Q9H3C7 697 aa30.04■■■□□ 2.4
TMEM56-203ENST00000456991 RAPGEF4Q8WZA2 1011 aa30.03■■■□□ 2.4
TMEM56-203ENST00000456991 KLHL34Q8N239 644 aa30.02■■■□□ 2.4
TMEM56-203ENST00000456991 CCNL1Q9UK58 526 aaPredicted RBP30.02■■■□□ 2.4
TMEM56-203ENST00000456991 NSD2O96028 1365 aa30.02■■■□□ 2.4
TMEM56-203ENST00000456991 MEGF6O75095 1541 aa30.01■■■□□ 2.39
TMEM56-203ENST00000456991 USHBP1Q8N6Y0 703 aa29.99■■■□□ 2.39
TMEM56-203ENST00000456991 SMG6Q86US8 1419 aaKnown RBP29.98■■■□□ 2.39
TMEM56-203ENST00000456991 TATP17735 454 aaPredicted RBP29.98■■■□□ 2.39
TMEM56-203ENST00000456991 CDCA8Q53HL2 280 aa29.98■■■□□ 2.39
TMEM56-203ENST00000456991 USP47Q96K76 1375 aa29.98■■■□□ 2.39
TMEM56-203ENST00000456991 MSH5O43196 834 aa29.95■■■□□ 2.39
TMEM56-203ENST00000456991 HMGB2P26583 209 aaKnown RBP29.95■■■□□ 2.39
TMEM56-203ENST00000456991 HSP90AB2PQ58FF8 381 aa29.95■■■□□ 2.39
TMEM56-203ENST00000456991 INSRP06213 1382 aa29.94■■■□□ 2.38
TMEM56-203ENST00000456991 COL23A1Q86Y22 540 aaPredicted RBP29.92■■■□□ 2.38
TMEM56-203ENST00000456991 PELP1Q8IZL8 1130 aaKnown RBP29.92■■■□□ 2.38
TMEM56-203ENST00000456991 PCDH11XQ9BZA7 1347 aa29.91■■■□□ 2.38
TMEM56-203ENST00000456991 PCDH11YQ9BZA8 1340 aa29.91■■■□□ 2.38
TMEM56-203ENST00000456991 KIF24Q5T7B8 1368 aa29.9■■■□□ 2.38
TMEM56-203ENST00000456991 FLT4P35916 1363 aa29.9■■■□□ 2.38
TMEM56-203ENST00000456991 QSER1Q2KHR3 1735 aa29.89■■■□□ 2.38
TMEM56-203ENST00000456991 DOT1LQ8TEK3 1739 aa29.89■■■□□ 2.38
TMEM56-203ENST00000456991 NLGN2Q8NFZ4 835 aa29.89■■■□□ 2.38
TMEM56-203ENST00000456991 GOLGB1Q14789 3259 aaKnown RBP29.86■■■□□ 2.37
TMEM56-203ENST00000456991 C1QTNF8P60827 252 aa29.86■■■□□ 2.37
TMEM56-203ENST00000456991 MPRIPQ6WCQ1 1025 aa29.86■■■□□ 2.37
TMEM56-203ENST00000456991 FLAD1Q8NFF5 587 aa29.85■■■□□ 2.37
TMEM56-203ENST00000456991 CARD14Q9BXL6 1004 aa29.85■■■□□ 2.37
TMEM56-203ENST00000456991 LY75O60449 1722 aa29.85■■■□□ 2.37
TMEM56-203ENST00000456991 RGPD2P0DJD1 1756 aa29.85■■■□□ 2.37
TMEM56-203ENST00000456991 SHANK3Q9BYB0 1731 aa29.84■■■□□ 2.37
TMEM56-203ENST00000456991 CYP27B1O15528 508 aa29.83■■■□□ 2.37
TMEM56-203ENST00000456991 GRIN3BO60391 1043 aa29.83■■■□□ 2.37
TMEM56-203ENST00000456991 PALLDQ8WX93 1383 aa29.82■■■□□ 2.36
TMEM56-203ENST00000456991 MSL1Q68DK7 614 aa29.82■■■□□ 2.36
TMEM56-203ENST00000456991 SMARCC1Q92922 1105 aaPredicted RBP29.82■■■□□ 2.36
TMEM56-203ENST00000456991 COL24A1Q17RW2 1714 aa29.82■■■□□ 2.36
TMEM56-203ENST00000456991 CHD4Q14839 1912 aa29.81■■■□□ 2.36
TMEM56-203ENST00000456991 EMILIN1Q9Y6C2 1016 aa29.81■■■□□ 2.36
TMEM56-203ENST00000456991 PPM1GO15355 546 aaPredicted RBP29.8■■■□□ 2.36
TMEM56-203ENST00000456991 SENP3-EIF4A1A0A087X0R7 540 aa29.79■■■□□ 2.36
TMEM56-203ENST00000456991 TRIM26Q12899 539 aaPredicted RBP29.79■■■□□ 2.36
TMEM56-203ENST00000456991 SPG7Q9UQ90 795 aa29.78■■■□□ 2.36
TMEM56-203ENST00000456991 NSD3Q9BZ95 1437 aa29.78■■■□□ 2.36
TMEM56-203ENST00000456991 YBX3P16989 372 aaKnown RBP eCLIP29.77■■■□□ 2.36
TMEM56-203ENST00000456991 CD2APQ9Y5K6 639 aa29.77■■■□□ 2.36
TMEM56-203ENST00000456991 TUBGCP6Q96RT7 1819 aa29.76■■■□□ 2.35
TMEM56-203ENST00000456991 NKX1-1Q15270 411 aaPredicted RBP29.76■■■□□ 2.35
TMEM56-203ENST00000456991 GIGYF1O75420 1035 aaPredicted RBP29.75■■■□□ 2.35
TMEM56-203ENST00000456991 PIGBQ92521 554 aa29.75■■■□□ 2.35
TMEM56-203ENST00000456991 AK7Q96M32 723 aa29.75■■■□□ 2.35
TMEM56-203ENST00000456991 WASHC2AQ641Q2 1341 aa29.73■■■□□ 2.35
TMEM56-203ENST00000456991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.72■■■□□ 2.35
TMEM56-203ENST00000456991 TIMELESSQ9UNS1 1208 aa29.72■■■□□ 2.35
TMEM56-203ENST00000456991 EYA1Q99502 592 aa29.7■■■□□ 2.35
TMEM56-203ENST00000456991 NCAPD2Q15021 1401 aa29.69■■■□□ 2.34
TMEM56-203ENST00000456991 LOC102724428A0A0B4J2F2 783 aa29.68■■■□□ 2.34
TMEM56-203ENST00000456991 SIK1P57059 783 aa29.68■■■□□ 2.34
TMEM56-203ENST00000456991 TMOD3Q9NYL9 352 aa29.68■■■□□ 2.34
TMEM56-203ENST00000456991 KIF20BQ96Q89 1820 aa29.68■■■□□ 2.34
TMEM56-203ENST00000456991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.67■■■□□ 2.34
TMEM56-203ENST00000456991 POLKQ9UBT6 870 aa29.67■■■□□ 2.34
TMEM56-203ENST00000456991 C5P01031 1676 aa29.66■■■□□ 2.34
TMEM56-203ENST00000456991 PHF14O94880 888 aa29.66■■■□□ 2.34
TMEM56-203ENST00000456991 AMIGO3Q86WK7 504 aa29.66■■■□□ 2.34
TMEM56-203ENST00000456991 SSFA2P28290 1259 aa29.65■■■□□ 2.34
TMEM56-203ENST00000456991 IFNL2Q8IZJ0 200 aa29.65■■■□□ 2.34
TMEM56-203ENST00000456991 PHKG2P15735 406 aa29.62■■■□□ 2.33
TMEM56-203ENST00000456991 SMIM5Q71RC9 77 aa29.62■■■□□ 2.33
TMEM56-203ENST00000456991 LINC00116Q8NCU8 138 aa29.62■■■□□ 2.33
TMEM56-203ENST00000456991 ASAP1Q9ULH1 1129 aa29.62■■■□□ 2.33
TMEM56-203ENST00000456991 POLR3GLQ9BT43 218 aa29.61■■■□□ 2.33
TMEM56-203ENST00000456991 C4BP0C0L5 1744 aa29.6■■■□□ 2.33
TMEM56-203ENST00000456991 PKD1L3Q7Z443 1732 aa29.59■■■□□ 2.33
TMEM56-203ENST00000456991 ATP6V1AP38606 617 aa29.59■■■□□ 2.33
TMEM56-203ENST00000456991 GNPATO15228 680 aa29.58■■■□□ 2.33
TMEM56-203ENST00000456991 TNNT2P45379 298 aaPredicted RBP29.58■■■□□ 2.33
TMEM56-203ENST00000456991 EIF4A2Q14240 407 aaKnown RBP29.58■■■□□ 2.33
TMEM56-203ENST00000456991 TOGARAM1Q9Y4F4 1720 aa29.58■■■□□ 2.33
TMEM56-203ENST00000456991 ITPK1Q13572 414 aa29.57■■■□□ 2.32
TMEM56-203ENST00000456991 ATG3Q9NT62 314 aa29.57■■■□□ 2.32
TMEM56-203ENST00000456991 TAF1LQ8IZX4 1826 aa29.55■■■□□ 2.32
TMEM56-203ENST00000456991 IGSF1Q8N6C5 1336 aa29.55■■■□□ 2.32
TMEM56-203ENST00000456991 ATP10DQ9P241 1426 aa29.54■■■□□ 2.32
TMEM56-203ENST00000456991 ITGB4P16144 1822 aa29.54■■■□□ 2.32
TMEM56-203ENST00000456991 GPBP1L1Q9HC44 474 aaPredicted RBP29.53■■■□□ 2.32
TMEM56-203ENST00000456991 PLEKHG2Q9H7P9 1386 aa29.52■■■□□ 2.32
TMEM56-203ENST00000456991 CLSPNQ9HAW4 1339 aa29.52■■■□□ 2.32
TMEM56-203ENST00000456991 ANKRD26Q9UPS8 1709 aa29.51■■■□□ 2.32
TMEM56-203ENST00000456991 ERVV-2B6SEH9 535 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms