RNA–Protein interactions for RNA: ENST00000456816.5

LINC00887-204, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 796 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-204ENST00000456816 RBM6P78332 1123 aaKnown RBP18.72■□□□□ 0.59
LINC00887-204ENST00000456816 RGS17Q9UGC6 210 aaPredicted RBP18.72■□□□□ 0.59
LINC00887-204ENST00000456816 MEGF6O75095 1541 aa18.72■□□□□ 0.59
LINC00887-204ENST00000456816 ADRA2BP18089 450 aa18.71■□□□□ 0.59
LINC00887-204ENST00000456816 GLI3P10071 1580 aa18.7■□□□□ 0.58
LINC00887-204ENST00000456816 PLEKHO1Q53GL0 409 aaPredicted RBP18.7■□□□□ 0.58
LINC00887-204ENST00000456816 RUNDC1Q96C34 613 aa18.7■□□□□ 0.58
LINC00887-204ENST00000456816 SPG7Q9UQ90 795 aa18.7■□□□□ 0.58
LINC00887-204ENST00000456816 OVOS2A0A0G2JMS6 1433 aa18.69■□□□□ 0.58
LINC00887-204ENST00000456816 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
LINC00887-204ENST00000456816 PARP4Q9UKK3 1724 aaKnown RBP18.69■□□□□ 0.58
LINC00887-204ENST00000456816 DISP2A7MBM2 1401 aa18.68■□□□□ 0.58
LINC00887-204ENST00000456816 EXOC5O00471 708 aa18.68■□□□□ 0.58
LINC00887-204ENST00000456816 DDB1Q16531 1140 aa18.68■□□□□ 0.58
LINC00887-204ENST00000456816 AMOTQ4VCS5 1084 aa18.68■□□□□ 0.58
LINC00887-204ENST00000456816 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
LINC00887-204ENST00000456816 ZNF530Q6P9A1 599 aaPredicted RBP18.67■□□□□ 0.58
LINC00887-204ENST00000456816 SEPT12Q8IYM1 358 aa18.67■□□□□ 0.58
LINC00887-204ENST00000456816 PHACTR3Q96KR7 559 aa18.67■□□□□ 0.58
LINC00887-204ENST00000456816 PLEKHF1Q96S99 279 aa18.67■□□□□ 0.58
LINC00887-204ENST00000456816 C1orf141Q5JVX7 400 aa18.66■□□□□ 0.58
LINC00887-204ENST00000456816 GAS2L2Q8NHY3 880 aa18.66■□□□□ 0.58
LINC00887-204ENST00000456816 DDX54Q8TDD1 881 aaKnown RBP18.66■□□□□ 0.58
LINC00887-204ENST00000456816 WNK3Q9BYP7 1800 aa18.65■□□□□ 0.58
LINC00887-204ENST00000456816 PDE3BQ13370 1112 aa18.65■□□□□ 0.58
LINC00887-204ENST00000456816 PCDH11XQ9BZA7 1347 aa18.65■□□□□ 0.58
LINC00887-204ENST00000456816 PCDH11YQ9BZA8 1340 aa18.65■□□□□ 0.58
LINC00887-204ENST00000456816 PLEKHG2Q9H7P9 1386 aa18.65■□□□□ 0.58
LINC00887-204ENST00000456816 SENP3-EIF4A1A0A087X0R7 540 aa18.64■□□□□ 0.57
LINC00887-204ENST00000456816 NEUROD2Q15784 382 aa18.64■□□□□ 0.57
LINC00887-204ENST00000456816 MTHFSDQ2M296 383 aaKnown RBP18.64■□□□□ 0.57
LINC00887-204ENST00000456816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.57
LINC00887-204ENST00000456816 TNS2Q63HR2 1409 aa18.64■□□□□ 0.57
LINC00887-204ENST00000456816 APAF1O14727 1248 aa18.63■□□□□ 0.57
LINC00887-204ENST00000456816 NFE2L2Q16236 605 aa18.63■□□□□ 0.57
LINC00887-204ENST00000456816 RRP7AQ9Y3A4 280 aaKnown RBP18.63■□□□□ 0.57
LINC00887-204ENST00000456816 ONECUT3O60422 494 aaPredicted RBP18.62■□□□□ 0.57
LINC00887-204ENST00000456816 THSD7AQ9UPZ6 1657 aa18.62■□□□□ 0.57
LINC00887-204ENST00000456816 LRRC37A3O60309 1634 aa18.61■□□□□ 0.57
LINC00887-204ENST00000456816 IFNL2Q8IZJ0 200 aa18.61■□□□□ 0.57
LINC00887-204ENST00000456816 TMPOP42166 694 aaKnown RBP18.6■□□□□ 0.57
LINC00887-204ENST00000456816 RIPK4P57078 832 aa18.6■□□□□ 0.57
LINC00887-204ENST00000456816 AKAP4Q5JQC9 854 aa18.6■□□□□ 0.57
LINC00887-204ENST00000456816 RTF1Q92541 710 aaKnown RBP18.6■□□□□ 0.57
LINC00887-204ENST00000456816 SALL2Q9Y467 1007 aaPredicted RBP18.6■□□□□ 0.57
LINC00887-204ENST00000456816 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
LINC00887-204ENST00000456816 RGS12O14924 1447 aa18.59■□□□□ 0.57
LINC00887-204ENST00000456816 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
LINC00887-204ENST00000456816 PHKG2P15735 406 aa18.59■□□□□ 0.57
LINC00887-204ENST00000456816 PIAS4Q8N2W9 510 aaPredicted RBP18.59■□□□□ 0.57
LINC00887-204ENST00000456816 GNAT3A8MTJ3 354 aa18.58■□□□□ 0.56
LINC00887-204ENST00000456816 CYP27B1O15528 508 aa18.58■□□□□ 0.56
LINC00887-204ENST00000456816 HSP90AB1P08238 724 aaKnown RBP18.58■□□□□ 0.56
LINC00887-204ENST00000456816 LMOD3Q0VAK6 560 aa18.58■□□□□ 0.56
LINC00887-204ENST00000456816 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.56
LINC00887-204ENST00000456816 HNRNPUQ00839 825 aaKnown RBP eCLIP18.57■□□□□ 0.56
LINC00887-204ENST00000456816 MARCH10Q8NA82 808 aaPredicted RBP18.56■□□□□ 0.56
LINC00887-204ENST00000456816 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
LINC00887-204ENST00000456816 MPRIPQ6WCQ1 1025 aa18.55■□□□□ 0.56
LINC00887-204ENST00000456816 FAM182BQ5T319 152 aa18.54■□□□□ 0.56
LINC00887-204ENST00000456816 DCAF5Q96JK2 942 aa18.54■□□□□ 0.56
LINC00887-204ENST00000456816 HTATSF1O43719 755 aaKnown RBP18.53■□□□□ 0.56
LINC00887-204ENST00000456816 MCM10Q7L590 875 aa18.53■□□□□ 0.56
LINC00887-204ENST00000456816 NGEFQ8N5V2 710 aa18.53■□□□□ 0.56
LINC00887-204ENST00000456816 SHANK3Q9BYB0 1731 aa18.52■□□□□ 0.56
LINC00887-204ENST00000456816 RNMTO43148 476 aaKnown RBP18.52■□□□□ 0.56
LINC00887-204ENST00000456816 DCTN1Q14203 1278 aa18.52■□□□□ 0.56
LINC00887-204ENST00000456816 MSH5O43196 834 aa18.51■□□□□ 0.55
LINC00887-204ENST00000456816 TEFQ10587 303 aa18.51■□□□□ 0.55
LINC00887-204ENST00000456816 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
LINC00887-204ENST00000456816 NKX1-1Q15270 411 aaPredicted RBP18.5■□□□□ 0.55
LINC00887-204ENST00000456816 ACSBG1Q96GR2 724 aa18.5■□□□□ 0.55
LINC00887-204ENST00000456816 THUMPD2Q9BTF0 503 aaKnown RBP18.5■□□□□ 0.55
LINC00887-204ENST00000456816 LGR6Q9HBX8 967 aa18.5■□□□□ 0.55
LINC00887-204ENST00000456816 KDM6AO15550 1401 aaPredicted RBP18.49■□□□□ 0.55
LINC00887-204ENST00000456816 CABP4P57796 275 aa18.49■□□□□ 0.55
LINC00887-204ENST00000456816 CALD1Q05682 793 aaKnown RBP18.49■□□□□ 0.55
LINC00887-204ENST00000456816 FAM196AQ6ZSG2 479 aa18.49■□□□□ 0.55
LINC00887-204ENST00000456816 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
LINC00887-204ENST00000456816 BRWD3Q6RI45 1802 aa18.49■□□□□ 0.55
LINC00887-204ENST00000456816 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
LINC00887-204ENST00000456816 IL17REQ8NFR9 667 aa18.48■□□□□ 0.55
LINC00887-204ENST00000456816 ERVV-2B6SEH9 535 aa18.47■□□□□ 0.55
LINC00887-204ENST00000456816 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
LINC00887-204ENST00000456816 WWC1Q8IX03 1113 aa18.47■□□□□ 0.55
LINC00887-204ENST00000456816 TMOD3Q9NYL9 352 aa18.47■□□□□ 0.55
LINC00887-204ENST00000456816 LAS1LQ9Y4W2 734 aaKnown RBP18.47■□□□□ 0.55
LINC00887-204ENST00000456816 DLG5Q8TDM6 1919 aa18.47■□□□□ 0.55
LINC00887-204ENST00000456816 PRIM1P49642 420 aaKnown RBP18.46■□□□□ 0.55
LINC00887-204ENST00000456816 SLC52A2Q9HAB3 445 aa18.45■□□□□ 0.54
LINC00887-204ENST00000456816 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
LINC00887-204ENST00000456816 DOT1LQ8TEK3 1739 aa18.44■□□□□ 0.54
LINC00887-204ENST00000456816 NFATC2IPQ8NCF5 419 aa18.44■□□□□ 0.54
LINC00887-204ENST00000456816 BCL9O00512 1426 aa18.43■□□□□ 0.54
LINC00887-204ENST00000456816 KCNQ2O43526 872 aa18.42■□□□□ 0.54
LINC00887-204ENST00000456816 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
LINC00887-204ENST00000456816 WDR63Q8IWG1 891 aa18.42■□□□□ 0.54
LINC00887-204ENST00000456816 ZBED9Q6R2W3 1325 aa18.42■□□□□ 0.54
LINC00887-204ENST00000456816 SCN11AQ9UI33 1791 aa18.42■□□□□ 0.54
LINC00887-204ENST00000456816 TOGARAM1Q9Y4F4 1720 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms