RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
CLIP4-208ENST00000456385 PNPLA6Q8IY17 1366 aa12.57□□□□□ -0.4
CLIP4-208ENST00000456385 BRD1O95696 1058 aa12.56□□□□□ -0.4
CLIP4-208ENST00000456385 ATP2B3Q16720 1220 aa12.56□□□□□ -0.4
CLIP4-208ENST00000456385 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
CLIP4-208ENST00000456385 REC8O95072 547 aa12.56□□□□□ -0.4
CLIP4-208ENST00000456385 NFE2L2Q16236 605 aa12.56□□□□□ -0.4
CLIP4-208ENST00000456385 UTP14CQ5TAP6 766 aaKnown RBP12.56□□□□□ -0.4
CLIP4-208ENST00000456385 PIBF1Q8WXW3 757 aa12.56□□□□□ -0.4
CLIP4-208ENST00000456385 CFAP65Q6ZU64 1925 aaKnown RBP12.55□□□□□ -0.4
CLIP4-208ENST00000456385 PPP4R3BQ5MIZ7 849 aa12.55□□□□□ -0.4
CLIP4-208ENST00000456385 GLI2P10070 1586 aa12.55□□□□□ -0.4
CLIP4-208ENST00000456385 FANCAO15360 1455 aa12.55□□□□□ -0.4
CLIP4-208ENST00000456385 ERC2O15083 957 aa12.55□□□□□ -0.4
CLIP4-208ENST00000456385 GNAI1P63096 354 aa12.55□□□□□ -0.4
CLIP4-208ENST00000456385 ANKRD44Q8N8A2 993 aa12.55□□□□□ -0.4
CLIP4-208ENST00000456385 API5Q9BZZ5 524 aaKnown RBP12.55□□□□□ -0.4
CLIP4-208ENST00000456385 IFT57Q9NWB7 429 aa12.55□□□□□ -0.4
CLIP4-208ENST00000456385 ZCCHC11Q5TAX3 1644 aaKnown RBP12.55□□□□□ -0.4
CLIP4-208ENST00000456385 FAM135BQ49AJ0 1406 aa12.55□□□□□ -0.4
CLIP4-208ENST00000456385 FAM83GA6ND36 823 aa12.54□□□□□ -0.4
CLIP4-208ENST00000456385 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
CLIP4-208ENST00000456385 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
CLIP4-208ENST00000456385 MINK1Q8N4C8 1332 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-208ENST00000456385 KRT24Q2M2I5 525 aa12.54□□□□□ -0.4
CLIP4-208ENST00000456385 TSHZ3Q63HK5 1081 aa12.54□□□□□ -0.4
CLIP4-208ENST00000456385 CEP85Q6P2H3 762 aa12.54□□□□□ -0.4
CLIP4-208ENST00000456385 PALD1Q9ULE6 856 aa12.54□□□□□ -0.4
CLIP4-208ENST00000456385 PPLO60437 1756 aa12.53□□□□□ -0.4
CLIP4-208ENST00000456385 ATP10DQ9P241 1426 aa12.53□□□□□ -0.4
CLIP4-208ENST00000456385 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
CLIP4-208ENST00000456385 ADCY5O95622 1261 aa12.53□□□□□ -0.4
CLIP4-208ENST00000456385 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLIP4-208ENST00000456385 HMGN5P82970 282 aaKnown RBP12.53□□□□□ -0.4
CLIP4-208ENST00000456385 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
CLIP4-208ENST00000456385 USP48Q86UV5 1035 aa12.53□□□□□ -0.4
CLIP4-208ENST00000456385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLIP4-208ENST00000456385 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
CLIP4-208ENST00000456385 NPATQ14207 1427 aa12.53□□□□□ -0.4
CLIP4-208ENST00000456385 POLKQ9UBT6 870 aa12.53□□□□□ -0.4
CLIP4-208ENST00000456385 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
CLIP4-208ENST00000456385 GGT6Q6P531 493 aa12.52□□□□□ -0.41
CLIP4-208ENST00000456385 SYAP1Q96A49 352 aaPredicted RBP12.52□□□□□ -0.41
CLIP4-208ENST00000456385 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
CLIP4-208ENST00000456385 CD163L1Q9NR16 1453 aa12.52□□□□□ -0.41
CLIP4-208ENST00000456385 ARHGEF28Q8N1W1 1705 aaKnown RBP12.52□□□□□ -0.41
CLIP4-208ENST00000456385 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
CLIP4-208ENST00000456385 CUL4AQ13619 759 aa12.51□□□□□ -0.41
CLIP4-208ENST00000456385 MEIS3Q99687 375 aa12.51□□□□□ -0.41
CLIP4-208ENST00000456385 CAMSAP1Q5T5Y3 1602 aa12.5□□□□□ -0.41
CLIP4-208ENST00000456385 FKBP5Q13451 457 aaPredicted RBP12.5□□□□□ -0.41
CLIP4-208ENST00000456385 RPAP2Q8IXW5 612 aaPredicted RBP12.5□□□□□ -0.41
CLIP4-208ENST00000456385 UPF3BQ9BZI7 483 aaKnown RBP12.5□□□□□ -0.41
CLIP4-208ENST00000456385 IGSF3O75054 1194 aa12.5□□□□□ -0.41
CLIP4-208ENST00000456385 PHF14O94880 888 aa12.5□□□□□ -0.41
CLIP4-208ENST00000456385 PLCB2Q00722 1185 aa12.5□□□□□ -0.41
CLIP4-208ENST00000456385 CABP1Q9NZU7 370 aa12.5□□□□□ -0.41
CLIP4-208ENST00000456385 YEATS2Q9ULM3 1422 aa12.5□□□□□ -0.41
CLIP4-208ENST00000456385 RPGRIP1LQ68CZ1 1315 aa12.5□□□□□ -0.41
CLIP4-208ENST00000456385 PDE1AP54750 535 aa12.49□□□□□ -0.41
CLIP4-208ENST00000456385 SPTLC3Q9NUV7 552 aa12.49□□□□□ -0.41
CLIP4-208ENST00000456385 EMILIN1Q9Y6C2 1016 aa12.49□□□□□ -0.41
CLIP4-208ENST00000456385 RTL1A6NKG5 1358 aa12.49□□□□□ -0.41
CLIP4-208ENST00000456385 MSH6P52701 1360 aa12.49□□□□□ -0.41
CLIP4-208ENST00000456385 VGFO15240 615 aaPredicted RBP12.49□□□□□ -0.41
CLIP4-208ENST00000456385 FAM184AQ8NB25 1140 aa12.49□□□□□ -0.41
CLIP4-208ENST00000456385 PRAM1Q96QH2 718 aa12.49□□□□□ -0.41
CLIP4-208ENST00000456385 UVSSAQ2YD98 709 aa12.48□□□□□ -0.41
CLIP4-208ENST00000456385 GTPBP4Q9BZE4 634 aaKnown RBP12.48□□□□□ -0.41
CLIP4-208ENST00000456385 AP5Z1O43299 807 aa12.48□□□□□ -0.41
CLIP4-208ENST00000456385 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.412e-8■■■■■ 36.5
CLIP4-208ENST00000456385 MCM2P49736 904 aa12.48□□□□□ -0.41
CLIP4-208ENST00000456385 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
CLIP4-208ENST00000456385 INTS4Q96HW7 963 aaKnown RBP12.48□□□□□ -0.41
CLIP4-208ENST00000456385 ANO2Q9NQ90 1003 aa12.48□□□□□ -0.41
CLIP4-208ENST00000456385 CNPY2Q9Y2B0 182 aa12.48□□□□□ -0.41
CLIP4-208ENST00000456385 ARHGEF40Q8TER5 1519 aa12.48□□□□□ -0.41
CLIP4-208ENST00000456385 KIF24Q5T7B8 1368 aa12.47□□□□□ -0.41
CLIP4-208ENST00000456385 RGS12O14924 1447 aa12.47□□□□□ -0.41
CLIP4-208ENST00000456385 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
CLIP4-208ENST00000456385 PDCL2Q8N4E4 241 aa12.47□□□□□ -0.41
CLIP4-208ENST00000456385 ESYT1Q9BSJ8 1104 aa12.47□□□□□ -0.41
CLIP4-208ENST00000456385 SRCIN1Q9C0H9 1055 aa12.47□□□□□ -0.41
CLIP4-208ENST00000456385 KCNF1Q9H3M0 494 aa12.47□□□□□ -0.41
CLIP4-208ENST00000456385 PYCARDQ9ULZ3 195 aa12.47□□□□□ -0.41
CLIP4-208ENST00000456385 LMTK2Q8IWU2 1503 aa12.47□□□□□ -0.41
CLIP4-208ENST00000456385 CHD1O14646 1710 aa12.46□□□□□ -0.41
CLIP4-208ENST00000456385 KDM4AO75164 1064 aa12.46□□□□□ -0.41
CLIP4-208ENST00000456385 IL13P35225 146 aa12.46□□□□□ -0.41
CLIP4-208ENST00000456385 CCDC183Q5T5S1 534 aa12.46□□□□□ -0.41
CLIP4-208ENST00000456385 ARAP3Q8WWN8 1544 aa12.46□□□□□ -0.42
CLIP4-208ENST00000456385 CDC42BPGQ6DT37 1551 aa12.46□□□□□ -0.42
CLIP4-208ENST00000456385 DTNBO60941 627 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 MX1P20591 662 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 CDK19Q9BWU1 502 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 EXOC6BQ9Y2D4 811 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 ZFYVE9O95405 1425 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 RIMS2Q9UQ26 1411 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 KIF20AO95235 890 aa12.45□□□□□ -0.42
CLIP4-208ENST00000456385 GIMAP6Q6P9H5 292 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms