RNA–Protein interactions for RNA: ENST00000456330.1

TSC22D4-204, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-204ENST00000456330 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
TSC22D4-204ENST00000456330 SLC15A2Q16348 729 aa20.24■□□□□ 0.83
TSC22D4-204ENST00000456330 TUBGCP6Q96RT7 1819 aa20.24■□□□□ 0.83
TSC22D4-204ENST00000456330 LY75O60449 1722 aa20.23■□□□□ 0.83
TSC22D4-204ENST00000456330 AMPHP49418 695 aa20.23■□□□□ 0.83
TSC22D4-204ENST00000456330 STK32BQ9NY57 414 aa20.23■□□□□ 0.83
TSC22D4-204ENST00000456330 YY1P25490 414 aa20.22■□□□□ 0.83
TSC22D4-204ENST00000456330 ZBTB7AO95365 584 aa20.21■□□□□ 0.83
TSC22D4-204ENST00000456330 SGIP1Q9BQI5 828 aa20.21■□□□□ 0.83
TSC22D4-204ENST00000456330 FLT4P35916 1363 aa20.21■□□□□ 0.83
TSC22D4-204ENST00000456330 CHD4Q14839 1912 aa20.19■□□□□ 0.82
TSC22D4-204ENST00000456330 SMG6Q86US8 1419 aaKnown RBP20.19■□□□□ 0.82
TSC22D4-204ENST00000456330 ITGB4P16144 1822 aa20.19■□□□□ 0.82
TSC22D4-204ENST00000456330 USHBP1Q8N6Y0 703 aa20.19■□□□□ 0.82
TSC22D4-204ENST00000456330 ACSBG1Q96GR2 724 aa20.19■□□□□ 0.82
TSC22D4-204ENST00000456330 MTFR1LQ9H019 292 aa20.18■□□□□ 0.82
TSC22D4-204ENST00000456330 EMILIN1Q9Y6C2 1016 aa20.18■□□□□ 0.82
TSC22D4-204ENST00000456330 INSRP06213 1382 aa20.16■□□□□ 0.82
TSC22D4-204ENST00000456330 MAP3K5Q99683 1374 aa20.16■□□□□ 0.82
TSC22D4-204ENST00000456330 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
TSC22D4-204ENST00000456330 ATF5Q9Y2D1 282 aaPredicted RBP20.15■□□□□ 0.82
TSC22D4-204ENST00000456330 CGNL1Q0VF96 1302 aa20.15■□□□□ 0.82
TSC22D4-204ENST00000456330 KIF24Q5T7B8 1368 aa20.14■□□□□ 0.81
TSC22D4-204ENST00000456330 DCAF8L1A6NGE4 600 aa20.14■□□□□ 0.81
TSC22D4-204ENST00000456330 NBPF6Q5VWK0 638 aa20.14■□□□□ 0.81
TSC22D4-204ENST00000456330 NBPF4Q96M43 638 aa20.14■□□□□ 0.81
TSC22D4-204ENST00000456330 LRRC4BQ9NT99 713 aa20.14■□□□□ 0.81
TSC22D4-204ENST00000456330 GOLGB1Q14789 3259 aaKnown RBP20.13■□□□□ 0.81
TSC22D4-204ENST00000456330 NSD2O96028 1365 aa20.13■□□□□ 0.81
TSC22D4-204ENST00000456330 ZNF827Q17R98 1081 aa20.13■□□□□ 0.81
TSC22D4-204ENST00000456330 NCAPD2Q15021 1401 aa20.12■□□□□ 0.81
TSC22D4-204ENST00000456330 FHDC1Q9C0D6 1143 aaPredicted RBP20.12■□□□□ 0.81
TSC22D4-204ENST00000456330 SYT17Q9BSW7 474 aa20.11■□□□□ 0.81
TSC22D4-204ENST00000456330 PPM1GO15355 546 aaPredicted RBP20.1■□□□□ 0.81
TSC22D4-204ENST00000456330 SLC27A3Q5K4L6 730 aa20.1■□□□□ 0.81
TSC22D4-204ENST00000456330 DDX54Q8TDD1 881 aaKnown RBP20.1■□□□□ 0.81
TSC22D4-204ENST00000456330 AKT1S1Q96B36 256 aa20.1■□□□□ 0.81
TSC22D4-204ENST00000456330 PANK3Q9H999 370 aa20.1■□□□□ 0.81
TSC22D4-204ENST00000456330 TAF1LQ8IZX4 1826 aa20.1■□□□□ 0.81
TSC22D4-204ENST00000456330 C5P01031 1676 aa20.1■□□□□ 0.81
TSC22D4-204ENST00000456330 VIRMAQ69YN4 1812 aaKnown RBP20.09■□□□□ 0.81
TSC22D4-204ENST00000456330 KIF7Q2M1P5 1343 aa20.09■□□□□ 0.81
TSC22D4-204ENST00000456330 TNNT2P45379 298 aaPredicted RBP20.09■□□□□ 0.81
TSC22D4-204ENST00000456330 ARXQ96QS3 562 aa20.06■□□□□ 0.8
TSC22D4-204ENST00000456330 PNPLA7Q6ZV29 1317 aa20.05■□□□□ 0.8
TSC22D4-204ENST00000456330 POLKQ9UBT6 870 aa20.05■□□□□ 0.8
TSC22D4-204ENST00000456330 ZCRB1Q8TBF4 217 aaKnown RBP20.04■□□□□ 0.8
TSC22D4-204ENST00000456330 SLC16A10Q8TF71 515 aa20.04■□□□□ 0.8
TSC22D4-204ENST00000456330 RAPGEF4Q8WZA2 1011 aa20.03■□□□□ 0.8
TSC22D4-204ENST00000456330 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.8
TSC22D4-204ENST00000456330 PRIM1P49642 420 aaKnown RBP20.02■□□□□ 0.8
TSC22D4-204ENST00000456330 SYTL4Q96C24 671 aaPredicted RBP20.02■□□□□ 0.8
TSC22D4-204ENST00000456330 TATP17735 454 aaPredicted RBP20.01■□□□□ 0.79
TSC22D4-204ENST00000456330 PCDH11XQ9BZA7 1347 aa20.01■□□□□ 0.79
TSC22D4-204ENST00000456330 PCDH11YQ9BZA8 1340 aa20.01■□□□□ 0.79
TSC22D4-204ENST00000456330 ZNF784Q8NCA9 323 aaPredicted RBP20■□□□□ 0.79
TSC22D4-204ENST00000456330 EIF4A2Q14240 407 aaKnown RBP19.99■□□□□ 0.79
TSC22D4-204ENST00000456330 EYA1Q99502 592 aa19.99■□□□□ 0.79
TSC22D4-204ENST00000456330 KCNQ4P56696 695 aa19.97■□□□□ 0.79
TSC22D4-204ENST00000456330 CYP27B1O15528 508 aa19.96■□□□□ 0.79
TSC22D4-204ENST00000456330 TFCP2L1Q9NZI6 479 aa19.96■□□□□ 0.79
TSC22D4-204ENST00000456330 UBR3Q6ZT12 1888 aa19.96■□□□□ 0.79
TSC22D4-204ENST00000456330 AMER1Q5JTC6 1135 aaPredicted RBP19.95■□□□□ 0.78
TSC22D4-204ENST00000456330 CCNL1Q9UK58 526 aaPredicted RBP19.95■□□□□ 0.78
TSC22D4-204ENST00000456330 C4BP0C0L5 1744 aa19.95■□□□□ 0.78
TSC22D4-204ENST00000456330 SCN11AQ9UI33 1791 aa19.95■□□□□ 0.78
TSC22D4-204ENST00000456330 POLD1P28340 1107 aa19.94■□□□□ 0.78
TSC22D4-204ENST00000456330 MORC1Q86VD1 984 aa19.94■□□□□ 0.78
TSC22D4-204ENST00000456330 KNSTRNQ9Y448 316 aa19.94■□□□□ 0.78
TSC22D4-204ENST00000456330 IGSF1Q8N6C5 1336 aa19.94■□□□□ 0.78
TSC22D4-204ENST00000456330 COL5A3P25940 1745 aaPredicted RBP19.91■□□□□ 0.78
TSC22D4-204ENST00000456330 PALLDQ8WX93 1383 aa19.9■□□□□ 0.78
TSC22D4-204ENST00000456330 COL3A1P02461 1466 aaPredicted RBP19.9■□□□□ 0.78
TSC22D4-204ENST00000456330 CC2D1BQ5T0F9 858 aaKnown RBP19.89■□□□□ 0.77
TSC22D4-204ENST00000456330 COL23A1Q86Y22 540 aaPredicted RBP19.89■□□□□ 0.77
TSC22D4-204ENST00000456330 AEBP1Q8IUX7 1158 aa19.89■□□□□ 0.77
TSC22D4-204ENST00000456330 NLGN2Q8NFZ4 835 aa19.89■□□□□ 0.77
TSC22D4-204ENST00000456330 KDM6AO15550 1401 aaPredicted RBP19.87■□□□□ 0.77
TSC22D4-204ENST00000456330 PER1O15534 1290 aaPredicted RBP19.87■□□□□ 0.77
TSC22D4-204ENST00000456330 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
TSC22D4-204ENST00000456330 GPR162Q16538 588 aa19.87■□□□□ 0.77
TSC22D4-204ENST00000456330 MPRIPQ6WCQ1 1025 aa19.87■□□□□ 0.77
TSC22D4-204ENST00000456330 SPG7Q9UQ90 795 aa19.86■□□□□ 0.77
TSC22D4-204ENST00000456330 TJP1Q07157 1748 aa19.85■□□□□ 0.77
TSC22D4-204ENST00000456330 PHKG2P15735 406 aa19.85■□□□□ 0.77
TSC22D4-204ENST00000456330 KLHL34Q8N239 644 aa19.85■□□□□ 0.77
TSC22D4-204ENST00000456330 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
TSC22D4-204ENST00000456330 PLEKHG2Q9H7P9 1386 aa19.84■□□□□ 0.77
TSC22D4-204ENST00000456330 HMGB2P26583 209 aaKnown RBP19.84■□□□□ 0.77
TSC22D4-204ENST00000456330 NKX1-1Q15270 411 aaPredicted RBP19.84■□□□□ 0.77
TSC22D4-204ENST00000456330 C4AP0C0L4 1744 aa19.84■□□□□ 0.77
TSC22D4-204ENST00000456330 KDRP35968 1356 aa19.83■□□□□ 0.77
TSC22D4-204ENST00000456330 ADAMTS7Q9UKP4 1686 aa19.83■□□□□ 0.76
TSC22D4-204ENST00000456330 FLAD1Q8NFF5 587 aa19.82■□□□□ 0.76
TSC22D4-204ENST00000456330 CICQ96RK0 1608 aaPredicted RBP19.81■□□□□ 0.76
TSC22D4-204ENST00000456330 YBX3P16989 372 aaKnown RBP eCLIP19.81■□□□□ 0.76
TSC22D4-204ENST00000456330 IL13P35225 146 aa19.81■□□□□ 0.76
TSC22D4-204ENST00000456330 MSL1Q68DK7 614 aa19.81■□□□□ 0.76
TSC22D4-204ENST00000456330 PIGBQ92521 554 aa19.81■□□□□ 0.76
TSC22D4-204ENST00000456330 SMARCC1Q92922 1105 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms