RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 PLEKHO1Q53GL0 409 aaPredicted RBP9.68□□□□□ -0.86
ERCC3-204ENST00000456257 PPP4R3CPQ6ZMV5 832 aa9.68□□□□□ -0.86
ERCC3-204ENST00000456257 EXOC6Q8TAG9 804 aa9.68□□□□□ -0.86
ERCC3-204ENST00000456257 TSR2Q969E8 191 aaKnown RBP9.68□□□□□ -0.86
ERCC3-204ENST00000456257 LRRC59Q96AG4 307 aaKnown RBP9.68□□□□□ -0.86
ERCC3-204ENST00000456257 THUMPD2Q9BTF0 503 aaKnown RBP9.68□□□□□ -0.86
ERCC3-204ENST00000456257 ZC3H6P61129 1189 aaKnown RBP9.67□□□□□ -0.86
ERCC3-204ENST00000456257 TAF7Q15545 349 aaPredicted RBP9.67□□□□□ -0.86
ERCC3-204ENST00000456257 C20orf194Q5TEA3 1177 aa9.67□□□□□ -0.86
ERCC3-204ENST00000456257 LMOD2Q6P5Q4 547 aa9.67□□□□□ -0.86
ERCC3-204ENST00000456257 CABLES1Q8TDN4 633 aa9.67□□□□□ -0.86
ERCC3-204ENST00000456257 SSH1Q8WYL5 1049 aa9.67□□□□□ -0.86
ERCC3-204ENST00000456257 NHSL1Q5SYE7 1610 aa9.67□□□□□ -0.86
ERCC3-204ENST00000456257 LTN1O94822 1766 aa9.66□□□□□ -0.86
ERCC3-204ENST00000456257 MS4A1P11836 297 aa9.66□□□□□ -0.86
ERCC3-204ENST00000456257 HAP1P54257 671 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-204ENST00000456257 DCTN1Q14203 1278 aa9.66□□□□□ -0.86
ERCC3-204ENST00000456257 AKAP4Q5JQC9 854 aa9.66□□□□□ -0.86
ERCC3-204ENST00000456257 C8orf58Q8NAV2 365 aa9.66□□□□□ -0.86
ERCC3-204ENST00000456257 LTV1Q96GA3 475 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-204ENST00000456257 RNF39Q9H2S5 420 aa9.66□□□□□ -0.86
ERCC3-204ENST00000456257 AHDC1Q5TGY3 1603 aaPredicted RBP9.66□□□□□ -0.86
ERCC3-204ENST00000456257 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.86
ERCC3-204ENST00000456257 MAP3K5Q99683 1374 aa9.65□□□□□ -0.86
ERCC3-204ENST00000456257 DLG5Q8TDM6 1919 aa9.65□□□□□ -0.86
ERCC3-204ENST00000456257 HOXD11P31277 338 aaPredicted RBP9.65□□□□□ -0.86
ERCC3-204ENST00000456257 MCM10Q7L590 875 aa9.65□□□□□ -0.86
ERCC3-204ENST00000456257 MRPL50Q8N5N7 158 aaKnown RBP9.65□□□□□ -0.86
ERCC3-204ENST00000456257 TSPYL6Q8N831 410 aa9.65□□□□□ -0.86
ERCC3-204ENST00000456257 RTF1Q92541 710 aaKnown RBP9.65□□□□□ -0.86
ERCC3-204ENST00000456257 CRBNQ96SW2 442 aa9.65□□□□□ -0.86
ERCC3-204ENST00000456257 IPO8O15397 1037 aaKnown RBP9.64□□□□□ -0.87
ERCC3-204ENST00000456257 CARD10Q9BWT7 1032 aa9.64□□□□□ -0.87
ERCC3-204ENST00000456257 WDR17Q8IZU2 1322 aa9.63□□□□□ -0.87
ERCC3-204ENST00000456257 TOM1O60784 492 aa9.63□□□□□ -0.87
ERCC3-204ENST00000456257 RLBP1P12271 317 aa9.63□□□□□ -0.87
ERCC3-204ENST00000456257 TWISTNBQ3B726 338 aaPredicted RBP9.63□□□□□ -0.87
ERCC3-204ENST00000456257 ZKSCAN2Q63HK3 967 aa9.63□□□□□ -0.87
ERCC3-204ENST00000456257 ATF7IPQ6VMQ6 1270 aa9.63□□□□□ -0.87
ERCC3-204ENST00000456257 USHBP1Q8N6Y0 703 aa9.63□□□□□ -0.87
ERCC3-204ENST00000456257 HEG1Q9ULI3 1381 aa9.63□□□□□ -0.87
ERCC3-204ENST00000456257 KIF16BQ96L93 1317 aa9.62□□□□□ -0.87
ERCC3-204ENST00000456257 RNMTO43148 476 aaKnown RBP9.62□□□□□ -0.87
ERCC3-204ENST00000456257 HOXB7P09629 217 aa9.62□□□□□ -0.87
ERCC3-204ENST00000456257 NKX1-1Q15270 411 aaPredicted RBP9.62□□□□□ -0.87
ERCC3-204ENST00000456257 B4GALNT3Q6L9W6 998 aa9.62□□□□□ -0.87
ERCC3-204ENST00000456257 PRDM11Q9NQV5 511 aa9.62□□□□□ -0.87
ERCC3-204ENST00000456257 ADAMTS7Q9UKP4 1686 aa9.61□□□□□ -0.87
ERCC3-204ENST00000456257 KDM2BQ8NHM5 1336 aa9.61□□□□□ -0.87
ERCC3-204ENST00000456257 LRRC37A3O60309 1634 aa9.61□□□□□ -0.87
ERCC3-204ENST00000456257 TRIM27P14373 513 aa9.61□□□□□ -0.87
ERCC3-204ENST00000456257 CHRNA2Q15822 529 aa9.61□□□□□ -0.87
ERCC3-204ENST00000456257 ZNF530Q6P9A1 599 aaPredicted RBP9.61□□□□□ -0.87
ERCC3-204ENST00000456257 DZIP1LQ8IYY4 767 aaKnown RBP9.61□□□□□ -0.87
ERCC3-204ENST00000456257 CCDC136Q96JN2 1154 aa9.61□□□□□ -0.87
ERCC3-204ENST00000456257 CHMP4AQ9BY43 222 aa9.61□□□□□ -0.87
ERCC3-204ENST00000456257 LGR6Q9HBX8 967 aa9.61□□□□□ -0.87
ERCC3-204ENST00000456257 SMC4Q9NTJ3 1288 aa9.61□□□□□ -0.87
ERCC3-204ENST00000456257 NOB1Q9ULX3 412 aaKnown RBP9.61□□□□□ -0.87
ERCC3-204ENST00000456257 SPG7Q9UQ90 795 aa9.61□□□□□ -0.87
ERCC3-204ENST00000456257 TATP17735 454 aaPredicted RBP9.6□□□□□ -0.87
ERCC3-204ENST00000456257 MVPQ14764 893 aaKnown RBP9.6□□□□□ -0.87
ERCC3-204ENST00000456257 PELP1Q8IZL8 1130 aaKnown RBP9.6□□□□□ -0.87
ERCC3-204ENST00000456257 PANK1Q8TE04 598 aa9.6□□□□□ -0.87
ERCC3-204ENST00000456257 RAPGEF4Q8WZA2 1011 aa9.6□□□□□ -0.87
ERCC3-204ENST00000456257 NLRP2Q9NX02 1062 aa9.6□□□□□ -0.87
ERCC3-204ENST00000456257 LAS1LQ9Y4W2 734 aaKnown RBP9.6□□□□□ -0.87
ERCC3-204ENST00000456257 FAM208AQ9UK61 1670 aaKnown RBP9.6□□□□□ -0.87
ERCC3-204ENST00000456257 COL22A1Q8NFW1 1626 aaPredicted RBP9.6□□□□□ -0.87
ERCC3-204ENST00000456257 COL5A2P05997 1499 aaPredicted RBP9.59□□□□□ -0.87
ERCC3-204ENST00000456257 PHKG2P15735 406 aa9.59□□□□□ -0.87
ERCC3-204ENST00000456257 EIF4A1P60842 406 aaKnown RBP9.59□□□□□ -0.87
ERCC3-204ENST00000456257 ZBTB40Q9NUA8 1239 aa9.59□□□□□ -0.87
ERCC3-204ENST00000456257 TSPYL4Q9UJ04 414 aa9.59□□□□□ -0.87
ERCC3-204ENST00000456257 CYP27B1O15528 508 aa9.58□□□□□ -0.88
ERCC3-204ENST00000456257 HSP90AB1P08238 724 aaKnown RBP9.58□□□□□ -0.88
ERCC3-204ENST00000456257 C1orf141Q5JVX7 400 aa9.58□□□□□ -0.88
ERCC3-204ENST00000456257 INTS3Q68E01 1043 aaKnown RBP9.58□□□□□ -0.88
ERCC3-204ENST00000456257 IFNL2Q8IZJ0 200 aa9.58□□□□□ -0.88
ERCC3-204ENST00000456257 CLUAP1Q96AJ1 413 aa9.58□□□□□ -0.88
ERCC3-204ENST00000456257 DCAF5Q96JK2 942 aa9.58□□□□□ -0.88
ERCC3-204ENST00000456257 BCL2L13Q9BXK5 485 aa9.58□□□□□ -0.88
ERCC3-204ENST00000456257 API5Q9BZZ5 524 aaKnown RBP9.58□□□□□ -0.88
ERCC3-204ENST00000456257 TNNQ9UQP3 1299 aa9.58□□□□□ -0.88
ERCC3-204ENST00000456257 ROBO1Q9Y6N7 1651 aa9.58□□□□□ -0.88
ERCC3-204ENST00000456257 RGPD2P0DJD1 1756 aa9.58□□□□□ -0.88
ERCC3-204ENST00000456257 RGPD5Q99666 1765 aa9.58□□□□□ -0.88
ERCC3-204ENST00000456257 ABCC4O15439 1325 aa9.57□□□□□ -0.88
ERCC3-204ENST00000456257 PTPRCP08575 1304 aa9.57□□□□□ -0.88
ERCC3-204ENST00000456257 ZBTB7CA1YPR0 619 aa9.57□□□□□ -0.88
ERCC3-204ENST00000456257 ZBTB7BO15156 539 aaPredicted RBP9.57□□□□□ -0.88
ERCC3-204ENST00000456257 KRT24Q2M2I5 525 aa9.57□□□□□ -0.88
ERCC3-204ENST00000456257 CENPQQ7L2Z9 268 aaPredicted RBP9.57□□□□□ -0.88
ERCC3-204ENST00000456257 FBXO41Q8TF61 875 aa9.57□□□□□ -0.88
ERCC3-204ENST00000456257 FRAT1Q92837 279 aaPredicted RBP9.57□□□□□ -0.88
ERCC3-204ENST00000456257 CHMP4BQ9H444 224 aaKnown RBP9.57□□□□□ -0.88
ERCC3-204ENST00000456257 MIS18AQ9NYP9 233 aa9.57□□□□□ -0.88
ERCC3-204ENST00000456257 DDX19BQ9UMR2 479 aa9.57□□□□□ -0.88
ERCC3-204ENST00000456257 COG6Q9Y2V7 657 aa9.57□□□□□ -0.88
ERCC3-204ENST00000456257 MEGF6O75095 1541 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms