RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 USHBP1Q8N6Y0 703 aa17.19■□□□□ 0.34
SMCR2-201ENST00000456090 INSRP06213 1382 aa17.18■□□□□ 0.34
SMCR2-201ENST00000456090 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
SMCR2-201ENST00000456090 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
SMCR2-201ENST00000456090 STK32BQ9NY57 414 aa17.18■□□□□ 0.34
SMCR2-201ENST00000456090 LY75O60449 1722 aa17.17■□□□□ 0.34
SMCR2-201ENST00000456090 EIF4G2P78344 907 aaKnown RBP eCLIP17.17■□□□□ 0.34
SMCR2-201ENST00000456090 ZCRB1Q8TBF4 217 aaKnown RBP17.17■□□□□ 0.34
SMCR2-201ENST00000456090 PPP1R1BQ9UD71 204 aaPredicted RBP17.17■□□□□ 0.34
SMCR2-201ENST00000456090 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
SMCR2-201ENST00000456090 SLC15A2Q16348 729 aa17.16■□□□□ 0.34
SMCR2-201ENST00000456090 SYTL4Q96C24 671 aaPredicted RBP17.16■□□□□ 0.34
SMCR2-201ENST00000456090 EMILIN1Q9Y6C2 1016 aa17.16■□□□□ 0.34
SMCR2-201ENST00000456090 CGNL1Q0VF96 1302 aa17.16■□□□□ 0.34
SMCR2-201ENST00000456090 RAPGEF4Q8WZA2 1011 aa17.15■□□□□ 0.34
SMCR2-201ENST00000456090 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.34
SMCR2-201ENST00000456090 QSER1Q2KHR3 1735 aa17.14■□□□□ 0.33
SMCR2-201ENST00000456090 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
SMCR2-201ENST00000456090 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
SMCR2-201ENST00000456090 PRIM1P49642 420 aaKnown RBP17.14■□□□□ 0.33
SMCR2-201ENST00000456090 ITGB4P16144 1822 aa17.14■□□□□ 0.33
SMCR2-201ENST00000456090 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
SMCR2-201ENST00000456090 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
SMCR2-201ENST00000456090 LRRC4BQ9NT99 713 aa17.12■□□□□ 0.33
SMCR2-201ENST00000456090 GOLGB1Q14789 3259 aaKnown RBP17.11■□□□□ 0.33
SMCR2-201ENST00000456090 NSD2O96028 1365 aa17.11■□□□□ 0.33
SMCR2-201ENST00000456090 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
SMCR2-201ENST00000456090 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
SMCR2-201ENST00000456090 TNNT2P45379 298 aaPredicted RBP17.09■□□□□ 0.33
SMCR2-201ENST00000456090 ZNF827Q17R98 1081 aa17.09■□□□□ 0.33
SMCR2-201ENST00000456090 SLC27A3Q5K4L6 730 aa17.09■□□□□ 0.33
SMCR2-201ENST00000456090 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
SMCR2-201ENST00000456090 PCDH11XQ9BZA7 1347 aa17.09■□□□□ 0.33
SMCR2-201ENST00000456090 PCDH11YQ9BZA8 1340 aa17.09■□□□□ 0.33
SMCR2-201ENST00000456090 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
SMCR2-201ENST00000456090 PTGER2P43116 358 aa17.08■□□□□ 0.32
SMCR2-201ENST00000456090 MTFR1LQ9H019 292 aa17.08■□□□□ 0.32
SMCR2-201ENST00000456090 PANK3Q9H999 370 aa17.08■□□□□ 0.32
SMCR2-201ENST00000456090 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
SMCR2-201ENST00000456090 TAF1LQ8IZX4 1826 aa17.07■□□□□ 0.32
SMCR2-201ENST00000456090 KCNQ4P56696 695 aa17.07■□□□□ 0.32
SMCR2-201ENST00000456090 C5P01031 1676 aa17.07■□□□□ 0.32
SMCR2-201ENST00000456090 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
SMCR2-201ENST00000456090 CYP27B1O15528 508 aa17.05■□□□□ 0.32
SMCR2-201ENST00000456090 EYA1Q99502 592 aa17.04■□□□□ 0.32
SMCR2-201ENST00000456090 CCNL1Q9UK58 526 aaPredicted RBP17.04■□□□□ 0.32
SMCR2-201ENST00000456090 COL24A1Q17RW2 1714 aa17.04■□□□□ 0.32
SMCR2-201ENST00000456090 EIF4A2Q14240 407 aaKnown RBP17.02■□□□□ 0.32
SMCR2-201ENST00000456090 MPRIPQ6WCQ1 1025 aa17.02■□□□□ 0.32
SMCR2-201ENST00000456090 SGIP1Q9BQI5 828 aa17.02■□□□□ 0.32
SMCR2-201ENST00000456090 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.32
SMCR2-201ENST00000456090 PNPLA7Q6ZV29 1317 aa17.01■□□□□ 0.31
SMCR2-201ENST00000456090 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
SMCR2-201ENST00000456090 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
SMCR2-201ENST00000456090 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
SMCR2-201ENST00000456090 MORC1Q86VD1 984 aa16.99■□□□□ 0.31
SMCR2-201ENST00000456090 KNSTRNQ9Y448 316 aa16.99■□□□□ 0.31
SMCR2-201ENST00000456090 PALLDQ8WX93 1383 aa16.99■□□□□ 0.31
SMCR2-201ENST00000456090 NKX1-1Q15270 411 aaPredicted RBP16.98■□□□□ 0.31
SMCR2-201ENST00000456090 SLC16A10Q8TF71 515 aa16.98■□□□□ 0.31
SMCR2-201ENST00000456090 ARXQ96QS3 562 aa16.98■□□□□ 0.31
SMCR2-201ENST00000456090 SYT17Q9BSW7 474 aa16.98■□□□□ 0.31
SMCR2-201ENST00000456090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.98■□□□□ 0.31
SMCR2-201ENST00000456090 CHD4Q14839 1912 aa16.98■□□□□ 0.31
SMCR2-201ENST00000456090 KIF7Q2M1P5 1343 aa16.97■□□□□ 0.31
SMCR2-201ENST00000456090 C4BP0C0L5 1744 aa16.97■□□□□ 0.31
SMCR2-201ENST00000456090 UBR3Q6ZT12 1888 aa16.97■□□□□ 0.31
SMCR2-201ENST00000456090 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.31
SMCR2-201ENST00000456090 PIGBQ92521 554 aa16.96■□□□□ 0.31
SMCR2-201ENST00000456090 PHKG2P15735 406 aa16.95■□□□□ 0.3
SMCR2-201ENST00000456090 IFNL2Q8IZJ0 200 aa16.95■□□□□ 0.3
SMCR2-201ENST00000456090 SMARCC1Q92922 1105 aaPredicted RBP16.95■□□□□ 0.3
SMCR2-201ENST00000456090 MSH5O43196 834 aa16.94■□□□□ 0.3
SMCR2-201ENST00000456090 YY1P25490 414 aa16.94■□□□□ 0.3
SMCR2-201ENST00000456090 POLD1P28340 1107 aa16.94■□□□□ 0.3
SMCR2-201ENST00000456090 VIRMAQ69YN4 1812 aaKnown RBP16.93■□□□□ 0.3
SMCR2-201ENST00000456090 PLEKHG2Q9H7P9 1386 aa16.93■□□□□ 0.3
SMCR2-201ENST00000456090 AMER1Q5JTC6 1135 aaPredicted RBP16.93■□□□□ 0.3
SMCR2-201ENST00000456090 COL23A1Q86Y22 540 aaPredicted RBP16.93■□□□□ 0.3
SMCR2-201ENST00000456090 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
SMCR2-201ENST00000456090 MAP3K5Q99683 1374 aa16.92■□□□□ 0.3
SMCR2-201ENST00000456090 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
SMCR2-201ENST00000456090 KLHL34Q8N239 644 aa16.91■□□□□ 0.3
SMCR2-201ENST00000456090 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
SMCR2-201ENST00000456090 ASAP1Q9ULH1 1129 aa16.9■□□□□ 0.3
SMCR2-201ENST00000456090 LOC102724428A0A0B4J2F2 783 aa16.89■□□□□ 0.29
SMCR2-201ENST00000456090 SIK1P57059 783 aa16.89■□□□□ 0.29
SMCR2-201ENST00000456090 PLEKHO1Q53GL0 409 aaPredicted RBP16.89■□□□□ 0.29
SMCR2-201ENST00000456090 AK7Q96M32 723 aa16.89■□□□□ 0.29
SMCR2-201ENST00000456090 SCN11AQ9UI33 1791 aa16.89■□□□□ 0.29
SMCR2-201ENST00000456090 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
SMCR2-201ENST00000456090 MSL1Q68DK7 614 aa16.88■□□□□ 0.29
SMCR2-201ENST00000456090 ZNF530Q6P9A1 599 aaPredicted RBP16.88■□□□□ 0.29
SMCR2-201ENST00000456090 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
SMCR2-201ENST00000456090 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
SMCR2-201ENST00000456090 AMOTQ4VCS5 1084 aa16.87■□□□□ 0.29
SMCR2-201ENST00000456090 SULT6B1Q6IMI4 303 aa16.87■□□□□ 0.29
SMCR2-201ENST00000456090 DCAF5Q96JK2 942 aa16.87■□□□□ 0.29
SMCR2-201ENST00000456090 ZNF831Q5JPB2 1677 aa16.87■□□□□ 0.29
SMCR2-201ENST00000456090 COL5A3P25940 1745 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms