RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 TXNRD1Q16881 649 aa24.35■■□□□ 1.49
COL13A1-206ENST00000456019 WASHC2AQ641Q2 1341 aa24.34■■□□□ 1.49
COL13A1-206ENST00000456019 NSD2O96028 1365 aa24.33■■□□□ 1.49
COL13A1-206ENST00000456019 TATP17735 454 aaPredicted RBP24.33■■□□□ 1.49
COL13A1-206ENST00000456019 POLKQ9UBT6 870 aa24.33■■□□□ 1.49
COL13A1-206ENST00000456019 TNNT2P45379 298 aaPredicted RBP24.31■■□□□ 1.48
COL13A1-206ENST00000456019 SHANK3Q9BYB0 1731 aa24.31■■□□□ 1.48
COL13A1-206ENST00000456019 ANO8Q9HCE9 1232 aaPredicted RBP24.31■■□□□ 1.48
COL13A1-206ENST00000456019 BTAF1O14981 1849 aa24.31■■□□□ 1.48
COL13A1-206ENST00000456019 MAP2P11137 1827 aaKnown RBP24.31■■□□□ 1.48
COL13A1-206ENST00000456019 KIF7Q2M1P5 1343 aa24.29■■□□□ 1.48
COL13A1-206ENST00000456019 KNSTRNQ9Y448 316 aa24.28■■□□□ 1.48
COL13A1-206ENST00000456019 NCAPD2Q15021 1401 aa24.27■■□□□ 1.48
COL13A1-206ENST00000456019 PRIM1P49642 420 aaKnown RBP24.27■■□□□ 1.48
COL13A1-206ENST00000456019 SYTL4Q96C24 671 aaPredicted RBP24.27■■□□□ 1.48
COL13A1-206ENST00000456019 STK32BQ9NY57 414 aa24.27■■□□□ 1.48
COL13A1-206ENST00000456019 PCDH11XQ9BZA7 1347 aa24.27■■□□□ 1.48
COL13A1-206ENST00000456019 PCDH11YQ9BZA8 1340 aa24.27■■□□□ 1.48
COL13A1-206ENST00000456019 DOT1LQ8TEK3 1739 aa24.26■■□□□ 1.47
COL13A1-206ENST00000456019 MORC1Q86VD1 984 aa24.25■■□□□ 1.47
COL13A1-206ENST00000456019 SLC15A2Q16348 729 aa24.24■■□□□ 1.47
COL13A1-206ENST00000456019 EYA1Q99502 592 aa24.24■■□□□ 1.47
COL13A1-206ENST00000456019 KAT6BQ8WYB5 2073 aa24.23■■□□□ 1.47
COL13A1-206ENST00000456019 SPON1Q9HCB6 807 aa24.23■■□□□ 1.47
COL13A1-206ENST00000456019 EIF4A2Q14240 407 aaKnown RBP24.22■■□□□ 1.47
COL13A1-206ENST00000456019 SLC27A3Q5K4L6 730 aa24.21■■□□□ 1.47
COL13A1-206ENST00000456019 SPG7Q9UQ90 795 aa24.2■■□□□ 1.46
COL13A1-206ENST00000456019 CASZ1Q86V15 1759 aa24.2■■□□□ 1.46
COL13A1-206ENST00000456019 PAPPAQ13219 1627 aa24.2■■□□□ 1.46
COL13A1-206ENST00000456019 PKD1L3Q7Z443 1732 aa24.19■■□□□ 1.46
COL13A1-206ENST00000456019 CYP27B1O15528 508 aa24.19■■□□□ 1.46
COL13A1-206ENST00000456019 LRRC4BQ9NT99 713 aa24.19■■□□□ 1.46
COL13A1-206ENST00000456019 AMER1Q5JTC6 1135 aaPredicted RBP24.18■■□□□ 1.46
COL13A1-206ENST00000456019 PDGFDQ9GZP0 370 aaPredicted RBP24.17■■□□□ 1.46
COL13A1-206ENST00000456019 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.17■■□□□ 1.46
COL13A1-206ENST00000456019 IGSF1Q8N6C5 1336 aa24.15■■□□□ 1.46
COL13A1-206ENST00000456019 PPP1R1BQ9UD71 204 aaPredicted RBP24.15■■□□□ 1.46
COL13A1-206ENST00000456019 PLEKHG2Q9H7P9 1386 aa24.15■■□□□ 1.46
COL13A1-206ENST00000456019 LY75O60449 1722 aa24.13■■□□□ 1.45
COL13A1-206ENST00000456019 PER1O15534 1290 aaPredicted RBP24.13■■□□□ 1.45
COL13A1-206ENST00000456019 ZBTB7AO95365 584 aa24.13■■□□□ 1.45
COL13A1-206ENST00000456019 NKX1-1Q15270 411 aaPredicted RBP24.13■■□□□ 1.45
COL13A1-206ENST00000456019 ZNF827Q17R98 1081 aa24.13■■□□□ 1.45
COL13A1-206ENST00000456019 MPRIPQ6WCQ1 1025 aa24.11■■□□□ 1.45
COL13A1-206ENST00000456019 AKT1S1Q96B36 256 aa24.11■■□□□ 1.45
COL13A1-206ENST00000456019 CCNL1Q9UK58 526 aaPredicted RBP24.11■■□□□ 1.45
COL13A1-206ENST00000456019 KCNQ4P56696 695 aa24.1■■□□□ 1.45
COL13A1-206ENST00000456019 IFNL2Q8IZJ0 200 aa24.1■■□□□ 1.45
COL13A1-206ENST00000456019 MTFR1LQ9H019 292 aa24.09■■□□□ 1.45
COL13A1-206ENST00000456019 ATF5Q9Y2D1 282 aaPredicted RBP24.09■■□□□ 1.45
COL13A1-206ENST00000456019 TOGARAM1Q9Y4F4 1720 aa24.09■■□□□ 1.45
COL13A1-206ENST00000456019 PHKG2P15735 406 aa24.08■■□□□ 1.45
COL13A1-206ENST00000456019 PALLDQ8WX93 1383 aa24.06■■□□□ 1.44
COL13A1-206ENST00000456019 HMGB2P26583 209 aaKnown RBP24.06■■□□□ 1.44
COL13A1-206ENST00000456019 PTGER2P43116 358 aa24.06■■□□□ 1.44
COL13A1-206ENST00000456019 CC2D1BQ5T0F9 858 aaKnown RBP24.06■■□□□ 1.44
COL13A1-206ENST00000456019 SMARCC1Q92922 1105 aaPredicted RBP24.06■■□□□ 1.44
COL13A1-206ENST00000456019 TFCP2L1Q9NZI6 479 aa24.06■■□□□ 1.44
COL13A1-206ENST00000456019 IL13P35225 146 aa24.05■■□□□ 1.44
COL13A1-206ENST00000456019 PLEKHO1Q53GL0 409 aaPredicted RBP24.05■■□□□ 1.44
COL13A1-206ENST00000456019 PIGBQ92521 554 aa24.05■■□□□ 1.44
COL13A1-206ENST00000456019 ITGB4P16144 1822 aa24.05■■□□□ 1.44
COL13A1-206ENST00000456019 NPC1L1Q9UHC9 1359 aa24.04■■□□□ 1.44
COL13A1-206ENST00000456019 QSER1Q2KHR3 1735 aa24.04■■□□□ 1.44
COL13A1-206ENST00000456019 MTHFSP49914 203 aa24.04■■□□□ 1.44
COL13A1-206ENST00000456019 AMOTQ4VCS5 1084 aa24.03■■□□□ 1.44
COL13A1-206ENST00000456019 TMOD3Q9NYL9 352 aa24.03■■□□□ 1.44
COL13A1-206ENST00000456019 HSP90AB1P08238 724 aaKnown RBP24.02■■□□□ 1.44
COL13A1-206ENST00000456019 SULT6B1Q6IMI4 303 aa24.02■■□□□ 1.44
COL13A1-206ENST00000456019 AEBP1Q8IUX7 1158 aa24.02■■□□□ 1.44
COL13A1-206ENST00000456019 SLC16A10Q8TF71 515 aa24.02■■□□□ 1.44
COL13A1-206ENST00000456019 PNPLA7Q6ZV29 1317 aa24.02■■□□□ 1.44
COL13A1-206ENST00000456019 SGIP1Q9BQI5 828 aa24.01■■□□□ 1.43
COL13A1-206ENST00000456019 KDRP35968 1356 aa24.01■■□□□ 1.43
COL13A1-206ENST00000456019 ZNF530Q6P9A1 599 aaPredicted RBP24■■□□□ 1.43
COL13A1-206ENST00000456019 DCAF5Q96JK2 942 aa23.99■■□□□ 1.43
COL13A1-206ENST00000456019 C5P01031 1676 aa23.99■■□□□ 1.43
COL13A1-206ENST00000456019 TUBGCP6Q96RT7 1819 aa23.98■■□□□ 1.43
COL13A1-206ENST00000456019 ERVV-2B6SEH9 535 aa23.97■■□□□ 1.43
COL13A1-206ENST00000456019 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
COL13A1-206ENST00000456019 C1orf141Q5JVX7 400 aa23.96■■□□□ 1.43
COL13A1-206ENST00000456019 LOC102724428A0A0B4J2F2 783 aa23.95■■□□□ 1.42
COL13A1-206ENST00000456019 DIAPH1O60610 1272 aaKnown RBP23.95■■□□□ 1.42
COL13A1-206ENST00000456019 SIK1P57059 783 aa23.95■■□□□ 1.42
COL13A1-206ENST00000456019 ARXQ96QS3 562 aa23.95■■□□□ 1.42
COL13A1-206ENST00000456019 ASAP1Q9ULH1 1129 aa23.95■■□□□ 1.42
COL13A1-206ENST00000456019 TAF1LQ8IZX4 1826 aa23.94■■□□□ 1.42
COL13A1-206ENST00000456019 DCAF8L1A6NGE4 600 aa23.93■■□□□ 1.42
COL13A1-206ENST00000456019 MSH5O43196 834 aa23.93■■□□□ 1.42
COL13A1-206ENST00000456019 POLD1P28340 1107 aa23.93■■□□□ 1.42
COL13A1-206ENST00000456019 FHDC1Q9C0D6 1143 aaPredicted RBP23.93■■□□□ 1.42
COL13A1-206ENST00000456019 ATG3Q9NT62 314 aa23.93■■□□□ 1.42
COL13A1-206ENST00000456019 KDM6AO15550 1401 aaPredicted RBP23.93■■□□□ 1.42
COL13A1-206ENST00000456019 COL23A1Q86Y22 540 aaPredicted RBP23.92■■□□□ 1.42
COL13A1-206ENST00000456019 FLAD1Q8NFF5 587 aa23.92■■□□□ 1.42
COL13A1-206ENST00000456019 C4BP0C0L5 1744 aa23.92■■□□□ 1.42
COL13A1-206ENST00000456019 CABP4P57796 275 aa23.91■■□□□ 1.42
COL13A1-206ENST00000456019 AK7Q96M32 723 aa23.91■■□□□ 1.42
COL13A1-206ENST00000456019 HMOX1P09601 288 aa23.9■■□□□ 1.42
COL13A1-206ENST00000456019 SYT17Q9BSW7 474 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms