RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
PSMC4-202ENST00000455878 ZNF784Q8NCA9 323 aaPredicted RBP18.63■□□□□ 0.57
PSMC4-202ENST00000455878 MYOM1P52179 1685 aa18.63■□□□□ 0.57
PSMC4-202ENST00000455878 MSH5O43196 834 aa18.62■□□□□ 0.57
PSMC4-202ENST00000455878 RAPGEF4Q8WZA2 1011 aa18.62■□□□□ 0.57
PSMC4-202ENST00000455878 BTAF1O14981 1849 aa18.62■□□□□ 0.57
PSMC4-202ENST00000455878 ANKRD36BQ8N2N9 1353 aa18.61■□□□□ 0.57
PSMC4-202ENST00000455878 HMGB2P26583 209 aaKnown RBP18.61■□□□□ 0.57
PSMC4-202ENST00000455878 KCNQ4P56696 695 aa18.61■□□□□ 0.57
PSMC4-202ENST00000455878 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
PSMC4-202ENST00000455878 FYB1O15117 783 aa18.6■□□□□ 0.57
PSMC4-202ENST00000455878 RRS1Q15050 365 aaKnown RBP18.6■□□□□ 0.57
PSMC4-202ENST00000455878 CDCA8Q53HL2 280 aa18.6■□□□□ 0.57
PSMC4-202ENST00000455878 NBPF6Q5VWK0 638 aa18.6■□□□□ 0.57
PSMC4-202ENST00000455878 NBPF4Q96M43 638 aa18.6■□□□□ 0.57
PSMC4-202ENST00000455878 GGNBP2Q9H3C7 697 aa18.6■□□□□ 0.57
PSMC4-202ENST00000455878 CCNL1Q9UK58 526 aaPredicted RBP18.6■□□□□ 0.57
PSMC4-202ENST00000455878 TATP17735 454 aaPredicted RBP18.59■□□□□ 0.57
PSMC4-202ENST00000455878 PELP1Q8IZL8 1130 aaKnown RBP18.59■□□□□ 0.57
PSMC4-202ENST00000455878 PNPLA7Q6ZV29 1317 aa18.58■□□□□ 0.57
PSMC4-202ENST00000455878 MAP3K5Q99683 1374 aa18.58■□□□□ 0.56
PSMC4-202ENST00000455878 USP47Q96K76 1375 aa18.57■□□□□ 0.56
PSMC4-202ENST00000455878 SMG6Q86US8 1419 aaKnown RBP18.56■□□□□ 0.56
PSMC4-202ENST00000455878 USHBP1Q8N6Y0 703 aa18.56■□□□□ 0.56
PSMC4-202ENST00000455878 HSP90AB2PQ58FF8 381 aa18.55■□□□□ 0.56
PSMC4-202ENST00000455878 RTL1A6NKG5 1358 aa18.55■□□□□ 0.56
PSMC4-202ENST00000455878 FAM208AQ9UK61 1670 aaKnown RBP18.55■□□□□ 0.56
PSMC4-202ENST00000455878 PAPPAQ13219 1627 aa18.54■□□□□ 0.56
PSMC4-202ENST00000455878 MPRIPQ6WCQ1 1025 aa18.52■□□□□ 0.56
PSMC4-202ENST00000455878 GOLGB1Q14789 3259 aaKnown RBP18.52■□□□□ 0.55
PSMC4-202ENST00000455878 COL23A1Q86Y22 540 aaPredicted RBP18.51■□□□□ 0.55
PSMC4-202ENST00000455878 FLAD1Q8NFF5 587 aa18.51■□□□□ 0.55
PSMC4-202ENST00000455878 PCDH11XQ9BZA7 1347 aa18.51■□□□□ 0.55
PSMC4-202ENST00000455878 PCDH11YQ9BZA8 1340 aa18.51■□□□□ 0.55
PSMC4-202ENST00000455878 PPM1GO15355 546 aaPredicted RBP18.5■□□□□ 0.55
PSMC4-202ENST00000455878 GRIN3BO60391 1043 aa18.5■□□□□ 0.55
PSMC4-202ENST00000455878 MEGF6O75095 1541 aa18.5■□□□□ 0.55
PSMC4-202ENST00000455878 CHD4Q14839 1912 aa18.5■□□□□ 0.55
PSMC4-202ENST00000455878 NSD2O96028 1365 aa18.5■□□□□ 0.55
PSMC4-202ENST00000455878 INSRP06213 1382 aa18.5■□□□□ 0.55
PSMC4-202ENST00000455878 C1QTNF8P60827 252 aa18.49■□□□□ 0.55
PSMC4-202ENST00000455878 NLGN2Q8NFZ4 835 aa18.49■□□□□ 0.55
PSMC4-202ENST00000455878 SMARCC1Q92922 1105 aaPredicted RBP18.49■□□□□ 0.55
PSMC4-202ENST00000455878 FLT4P35916 1363 aa18.48■□□□□ 0.55
PSMC4-202ENST00000455878 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
PSMC4-202ENST00000455878 KIF24Q5T7B8 1368 aa18.47■□□□□ 0.55
PSMC4-202ENST00000455878 MSL1Q68DK7 614 aa18.47■□□□□ 0.55
PSMC4-202ENST00000455878 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
PSMC4-202ENST00000455878 RGPD2P0DJD1 1756 aa18.46■□□□□ 0.55
PSMC4-202ENST00000455878 DOT1LQ8TEK3 1739 aa18.45■□□□□ 0.54
PSMC4-202ENST00000455878 CYP27B1O15528 508 aa18.45■□□□□ 0.54
PSMC4-202ENST00000455878 GIGYF1O75420 1035 aaPredicted RBP18.45■□□□□ 0.54
PSMC4-202ENST00000455878 AK7Q96M32 723 aa18.45■□□□□ 0.54
PSMC4-202ENST00000455878 CARD14Q9BXL6 1004 aa18.45■□□□□ 0.54
PSMC4-202ENST00000455878 EMILIN1Q9Y6C2 1016 aa18.45■□□□□ 0.54
PSMC4-202ENST00000455878 QSER1Q2KHR3 1735 aa18.44■□□□□ 0.54
PSMC4-202ENST00000455878 CD2APQ9Y5K6 639 aa18.44■□□□□ 0.54
PSMC4-202ENST00000455878 PALLDQ8WX93 1383 aa18.43■□□□□ 0.54
PSMC4-202ENST00000455878 LY75O60449 1722 aa18.43■□□□□ 0.54
PSMC4-202ENST00000455878 PIGBQ92521 554 aa18.41■□□□□ 0.54
PSMC4-202ENST00000455878 POLR3GLQ9BT43 218 aa18.41■□□□□ 0.54
PSMC4-202ENST00000455878 WASHC2AQ641Q2 1341 aa18.4■□□□□ 0.54
PSMC4-202ENST00000455878 YBX3P16989 372 aaKnown RBP eCLIP18.4■□□□□ 0.545e-7■□□□□ 9.7
PSMC4-202ENST00000455878 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
PSMC4-202ENST00000455878 NSD3Q9BZ95 1437 aa18.39■□□□□ 0.53
PSMC4-202ENST00000455878 PHF14O94880 888 aa18.39■□□□□ 0.53
PSMC4-202ENST00000455878 HSPA5P11021 654 aaKnown RBP18.39■□□□□ 0.53
PSMC4-202ENST00000455878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.531e-6■■■■■ 29.5
PSMC4-202ENST00000455878 TMOD3Q9NYL9 352 aa18.39■□□□□ 0.53
PSMC4-202ENST00000455878 SHANK3Q9BYB0 1731 aa18.39■□□□□ 0.53
PSMC4-202ENST00000455878 EIF4G2P78344 907 aaKnown RBP eCLIP18.38■□□□□ 0.53
PSMC4-202ENST00000455878 IFNL2Q8IZJ0 200 aa18.38■□□□□ 0.53
PSMC4-202ENST00000455878 EYA1Q99502 592 aa18.38■□□□□ 0.53
PSMC4-202ENST00000455878 LOC102724428A0A0B4J2F2 783 aa18.37■□□□□ 0.53
PSMC4-202ENST00000455878 SIK1P57059 783 aa18.37■□□□□ 0.53
PSMC4-202ENST00000455878 COL24A1Q17RW2 1714 aa18.36■□□□□ 0.53
PSMC4-202ENST00000455878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.36■□□□□ 0.53
PSMC4-202ENST00000455878 ATP6V1AP38606 617 aa18.36■□□□□ 0.53
PSMC4-202ENST00000455878 TUBGCP6Q96RT7 1819 aa18.36■□□□□ 0.53
PSMC4-202ENST00000455878 SSFA2P28290 1259 aa18.35■□□□□ 0.53
PSMC4-202ENST00000455878 TNNT2P45379 298 aaPredicted RBP18.35■□□□□ 0.53
PSMC4-202ENST00000455878 POLKQ9UBT6 870 aa18.35■□□□□ 0.53
PSMC4-202ENST00000455878 ASAP1Q9ULH1 1129 aa18.34■□□□□ 0.53
PSMC4-202ENST00000455878 KIF20BQ96Q89 1820 aa18.34■□□□□ 0.53
PSMC4-202ENST00000455878 PHKG2P15735 406 aa18.33■□□□□ 0.53
PSMC4-202ENST00000455878 GNPATO15228 680 aa18.32■□□□□ 0.52
PSMC4-202ENST00000455878 SMIM5Q71RC9 77 aa18.32■□□□□ 0.52
PSMC4-202ENST00000455878 LINC00116Q8NCU8 138 aa18.32■□□□□ 0.52
PSMC4-202ENST00000455878 GPBP1L1Q9HC44 474 aaPredicted RBP18.32■□□□□ 0.52
PSMC4-202ENST00000455878 C5P01031 1676 aa18.32■□□□□ 0.52
PSMC4-202ENST00000455878 EIF4A2Q14240 407 aaKnown RBP18.3■□□□□ 0.52
PSMC4-202ENST00000455878 TRAPPC3LQ5T215 181 aa18.3■□□□□ 0.52
PSMC4-202ENST00000455878 AMIGO3Q86WK7 504 aa18.3■□□□□ 0.52
PSMC4-202ENST00000455878 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
PSMC4-202ENST00000455878 HSP90AB1P08238 724 aaKnown RBP18.29■□□□□ 0.52
PSMC4-202ENST00000455878 PLEKHO1Q53GL0 409 aaPredicted RBP18.29■□□□□ 0.52
PSMC4-202ENST00000455878 IGSF1Q8N6C5 1336 aa18.29■□□□□ 0.52
PSMC4-202ENST00000455878 C4BP0C0L5 1744 aa18.29■□□□□ 0.52
PSMC4-202ENST00000455878 ERVV-2B6SEH9 535 aa18.28■□□□□ 0.52
PSMC4-202ENST00000455878 ITPK1Q13572 414 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms