RNA–Protein interactions for RNA: ENST00000455695.1

RGPD6-205, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-205ENST00000455695 NBPF4Q96M43 638 aa28.93■■■□□ 2.22
RGPD6-205ENST00000455695 KAT6BQ8WYB5 2073 aa28.93■■■□□ 2.22
RGPD6-205ENST00000455695 RGPD3A6NKT7 1758 aaPredicted RBP28.93■■■□□ 2.22
RGPD6-205ENST00000455695 RGPD4Q7Z3J3 1758 aa28.93■■■□□ 2.22
RGPD6-205ENST00000455695 AMER1Q5JTC6 1135 aaPredicted RBP28.89■■■□□ 2.22
RGPD6-205ENST00000455695 RAPGEF4Q8WZA2 1011 aa28.89■■■□□ 2.22
RGPD6-205ENST00000455695 BCL11BQ9C0K0 894 aaPredicted RBP28.89■■■□□ 2.22
RGPD6-205ENST00000455695 ANO8Q9HCE9 1232 aaPredicted RBP28.88■■■□□ 2.21
RGPD6-205ENST00000455695 PER1O15534 1290 aaPredicted RBP28.87■■■□□ 2.21
RGPD6-205ENST00000455695 USHBP1Q8N6Y0 703 aa28.87■■■□□ 2.21
RGPD6-205ENST00000455695 CASZ1Q86V15 1759 aa28.86■■■□□ 2.21
RGPD6-205ENST00000455695 TATP17735 454 aaPredicted RBP28.86■■■□□ 2.21
RGPD6-205ENST00000455695 ZCRB1Q8TBF4 217 aaKnown RBP28.85■■■□□ 2.21
RGPD6-205ENST00000455695 PROM2Q8N271 834 aa28.84■■■□□ 2.21
RGPD6-205ENST00000455695 DDX54Q8TDD1 881 aaKnown RBP28.84■■■□□ 2.21
RGPD6-205ENST00000455695 MEGF6O75095 1541 aa28.84■■■□□ 2.21
RGPD6-205ENST00000455695 ZNF784Q8NCA9 323 aaPredicted RBP28.83■■■□□ 2.21
RGPD6-205ENST00000455695 PTGER2P43116 358 aa28.82■■■□□ 2.2
RGPD6-205ENST00000455695 PDGFDQ9GZP0 370 aaPredicted RBP28.81■■■□□ 2.2
RGPD6-205ENST00000455695 NPC1L1Q9UHC9 1359 aa28.8■■■□□ 2.2
RGPD6-205ENST00000455695 CC2D1BQ5T0F9 858 aaKnown RBP28.8■■■□□ 2.2
RGPD6-205ENST00000455695 NHSQ6T4R5 1651 aa28.8■■■□□ 2.2
RGPD6-205ENST00000455695 ZBTB7AO95365 584 aa28.79■■■□□ 2.2
RGPD6-205ENST00000455695 EIF4A2Q14240 407 aaKnown RBP28.79■■■□□ 2.2
RGPD6-205ENST00000455695 PTF1AQ7RTS3 328 aa28.79■■■□□ 2.2
RGPD6-205ENST00000455695 SHANK3Q9BYB0 1731 aa28.78■■■□□ 2.2
RGPD6-205ENST00000455695 EYA1Q99502 592 aa28.78■■■□□ 2.2
RGPD6-205ENST00000455695 ACSBG1Q96GR2 724 aa28.77■■■□□ 2.2
RGPD6-205ENST00000455695 NCAPD2Q15021 1401 aa28.77■■■□□ 2.2
RGPD6-205ENST00000455695 PCDH11XQ9BZA7 1347 aa28.74■■■□□ 2.19
RGPD6-205ENST00000455695 PCDH11YQ9BZA8 1340 aa28.74■■■□□ 2.19
RGPD6-205ENST00000455695 SYT17Q9BSW7 474 aa28.74■■■□□ 2.19
RGPD6-205ENST00000455695 STK32BQ9NY57 414 aa28.74■■■□□ 2.19
RGPD6-205ENST00000455695 ATF5Q9Y2D1 282 aaPredicted RBP28.74■■■□□ 2.19
RGPD6-205ENST00000455695 SLC15A2Q16348 729 aa28.72■■■□□ 2.19
RGPD6-205ENST00000455695 TXNRD1Q16881 649 aa28.72■■■□□ 2.19
RGPD6-205ENST00000455695 FHDC1Q9C0D6 1143 aaPredicted RBP28.71■■■□□ 2.19
RGPD6-205ENST00000455695 SPG7Q9UQ90 795 aa28.71■■■□□ 2.19
RGPD6-205ENST00000455695 PKD1L3Q7Z443 1732 aa28.71■■■□□ 2.19
RGPD6-205ENST00000455695 BTAF1O14981 1849 aa28.71■■■□□ 2.19
RGPD6-205ENST00000455695 MTHFSP49914 203 aa28.7■■■□□ 2.18
RGPD6-205ENST00000455695 CNGB1Q14028 1251 aaPredicted RBP28.7■■■□□ 2.18
RGPD6-205ENST00000455695 MTFR1LQ9H019 292 aa28.7■■■□□ 2.18
RGPD6-205ENST00000455695 IGSF1Q8N6C5 1336 aa28.69■■■□□ 2.18
RGPD6-205ENST00000455695 SGIP1Q9BQI5 828 aa28.69■■■□□ 2.18
RGPD6-205ENST00000455695 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.69■■■□□ 2.18
RGPD6-205ENST00000455695 DOT1LQ8TEK3 1739 aa28.69■■■□□ 2.18
RGPD6-205ENST00000455695 PLEKHG2Q9H7P9 1386 aa28.68■■■□□ 2.18
RGPD6-205ENST00000455695 SYTL4Q96C24 671 aaPredicted RBP28.67■■■□□ 2.18
RGPD6-205ENST00000455695 ZNF316A6NFI3 1004 aaPredicted RBP28.65■■■□□ 2.18
RGPD6-205ENST00000455695 C1QTNF8P60827 252 aa28.65■■■□□ 2.18
RGPD6-205ENST00000455695 PRIM1P49642 420 aaKnown RBP28.64■■■□□ 2.18
RGPD6-205ENST00000455695 CHD4Q14839 1912 aa28.63■■■□□ 2.17
RGPD6-205ENST00000455695 SENP3-EIF4A1A0A087X0R7 540 aa28.63■■■□□ 2.17
RGPD6-205ENST00000455695 IL13P35225 146 aa28.63■■■□□ 2.17
RGPD6-205ENST00000455695 CYP27B1O15528 508 aa28.62■■■□□ 2.17
RGPD6-205ENST00000455695 IFNL2Q8IZJ0 200 aa28.6■■■□□ 2.17
RGPD6-205ENST00000455695 MAP3K5Q99683 1374 aa28.6■■■□□ 2.17
RGPD6-205ENST00000455695 DIAPH1O60610 1272 aaKnown RBP28.59■■■□□ 2.17
RGPD6-205ENST00000455695 PLEKHO1Q53GL0 409 aaPredicted RBP28.59■■■□□ 2.17
RGPD6-205ENST00000455695 SULT6B1Q6IMI4 303 aa28.59■■■□□ 2.17
RGPD6-205ENST00000455695 ARXQ96QS3 562 aa28.59■■■□□ 2.17
RGPD6-205ENST00000455695 AMOTQ4VCS5 1084 aa28.58■■■□□ 2.17
RGPD6-205ENST00000455695 UTRNP46939 3433 aa28.57■■■□□ 2.16
RGPD6-205ENST00000455695 NKX1-1Q15270 411 aaPredicted RBP28.57■■■□□ 2.16
RGPD6-205ENST00000455695 ITGB4P16144 1822 aa28.56■■■□□ 2.16
RGPD6-205ENST00000455695 KDRP35968 1356 aa28.55■■■□□ 2.16
RGPD6-205ENST00000455695 PHKG2P15735 406 aa28.55■■■□□ 2.16
RGPD6-205ENST00000455695 AEBP1Q8IUX7 1158 aa28.55■■■□□ 2.16
RGPD6-205ENST00000455695 CFAP53Q96M91 514 aa28.54■■■□□ 2.16
RGPD6-205ENST00000455695 SLC27A3Q5K4L6 730 aa28.53■■■□□ 2.16
RGPD6-205ENST00000455695 HSP90AB1P08238 724 aaKnown RBP28.52■■■□□ 2.16
RGPD6-205ENST00000455695 MPRIPQ6WCQ1 1025 aa28.52■■■□□ 2.16
RGPD6-205ENST00000455695 TOGARAM1Q9Y4F4 1720 aa28.52■■■□□ 2.16
RGPD6-205ENST00000455695 LY75O60449 1722 aa28.51■■■□□ 2.15
RGPD6-205ENST00000455695 PPP2R1AP30153 589 aa28.49■■■□□ 2.15
RGPD6-205ENST00000455695 ZNF530Q6P9A1 599 aaPredicted RBP28.49■■■□□ 2.15
RGPD6-205ENST00000455695 HMGB2P26583 209 aaKnown RBP28.48■■■□□ 2.15
RGPD6-205ENST00000455695 C1orf141Q5JVX7 400 aa28.48■■■□□ 2.15
RGPD6-205ENST00000455695 PAPPAQ13219 1627 aa28.47■■■□□ 2.15
RGPD6-205ENST00000455695 COL3A1P02461 1466 aaPredicted RBP28.47■■■□□ 2.15
RGPD6-205ENST00000455695 HMOX1P09601 288 aa28.47■■■□□ 2.15
RGPD6-205ENST00000455695 GPR162Q16538 588 aa28.47■■■□□ 2.15
RGPD6-205ENST00000455695 U2SURPO15042 1029 aaKnown RBP28.46■■■□□ 2.15
RGPD6-205ENST00000455695 IFFO2Q5TF58 517 aa28.46■■■□□ 2.15
RGPD6-205ENST00000455695 SLC16A10Q8TF71 515 aa28.46■■■□□ 2.15
RGPD6-205ENST00000455695 SMARCC1Q92922 1105 aaPredicted RBP28.46■■■□□ 2.15
RGPD6-205ENST00000455695 DCAF5Q96JK2 942 aa28.46■■■□□ 2.15
RGPD6-205ENST00000455695 TMOD3Q9NYL9 352 aa28.46■■■□□ 2.15
RGPD6-205ENST00000455695 DDX10Q13206 875 aaKnown RBP28.45■■■□□ 2.14
RGPD6-205ENST00000455695 NUDCQ9Y266 331 aa28.45■■■□□ 2.14
RGPD6-205ENST00000455695 LRRC4BQ9NT99 713 aa28.44■■■□□ 2.14
RGPD6-205ENST00000455695 CCNL1Q9UK58 526 aaPredicted RBP28.44■■■□□ 2.14
RGPD6-205ENST00000455695 ERVV-2B6SEH9 535 aa28.43■■■□□ 2.14
RGPD6-205ENST00000455695 ZNF827Q17R98 1081 aa28.43■■■□□ 2.14
RGPD6-205ENST00000455695 PIGBQ92521 554 aa28.43■■■□□ 2.14
RGPD6-205ENST00000455695 GIGYF1O75420 1035 aaPredicted RBP28.42■■■□□ 2.14
RGPD6-205ENST00000455695 PALLDQ8WX93 1383 aa28.41■■■□□ 2.14
RGPD6-205ENST00000455695 AKAP4Q5JQC9 854 aa28.39■■■□□ 2.14
RGPD6-205ENST00000455695 AKT1S1Q96B36 256 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms