RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 IGSF1Q8N6C5 1336 aa9.57□□□□□ -0.88
COMMD1-205ENST00000455659 ITGB4P16144 1822 aa9.57□□□□□ -0.88
COMMD1-205ENST00000455659 FAM196AQ6ZSG2 479 aa9.57□□□□□ -0.88
COMMD1-205ENST00000455659 PLEKHG2Q9H7P9 1386 aa9.57□□□□□ -0.88
COMMD1-205ENST00000455659 SRCAPQ6ZRS2 3230 aa9.57□□□□□ -0.88
COMMD1-205ENST00000455659 PCDH11XQ9BZA7 1347 aa9.56□□□□□ -0.88
COMMD1-205ENST00000455659 PCDH11YQ9BZA8 1340 aa9.56□□□□□ -0.88
COMMD1-205ENST00000455659 KDRP35968 1356 aa9.55□□□□□ -0.88
COMMD1-205ENST00000455659 EXOC5O00471 708 aa9.55□□□□□ -0.88
COMMD1-205ENST00000455659 TRIM37O94972 964 aa9.55□□□□□ -0.88
COMMD1-205ENST00000455659 TATP17735 454 aaPredicted RBP9.55□□□□□ -0.88
COMMD1-205ENST00000455659 MTHFSP49914 203 aa9.55□□□□□ -0.88
COMMD1-205ENST00000455659 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
COMMD1-205ENST00000455659 CCDC125Q86Z20 511 aa9.55□□□□□ -0.88
COMMD1-205ENST00000455659 MARCH10Q8NA82 808 aaPredicted RBP9.55□□□□□ -0.88
COMMD1-205ENST00000455659 EYA1Q99502 592 aa9.55□□□□□ -0.88
COMMD1-205ENST00000455659 BAG6P46379 1132 aa9.54□□□□□ -0.88
COMMD1-205ENST00000455659 LY75O60449 1722 aa9.53□□□□□ -0.88
COMMD1-205ENST00000455659 SCN11AQ9UI33 1791 aa9.53□□□□□ -0.88
COMMD1-205ENST00000455659 DEFB132Q7Z7B7 95 aa9.53□□□□□ -0.88
COMMD1-205ENST00000455659 ZCRB1Q8TBF4 217 aaKnown RBP9.53□□□□□ -0.88
COMMD1-205ENST00000455659 PAPPAQ13219 1627 aa9.53□□□□□ -0.88
COMMD1-205ENST00000455659 PPP2R1AP30153 589 aa9.52□□□□□ -0.89
COMMD1-205ENST00000455659 IL13P35225 146 aa9.52□□□□□ -0.89
COMMD1-205ENST00000455659 AEBP1Q8IUX7 1158 aa9.52□□□□□ -0.89
COMMD1-205ENST00000455659 DDX54Q8TDD1 881 aaKnown RBP9.52□□□□□ -0.89
COMMD1-205ENST00000455659 CFAP53Q96M91 514 aa9.52□□□□□ -0.89
COMMD1-205ENST00000455659 DIAPH1O60610 1272 aaKnown RBP9.51□□□□□ -0.89
COMMD1-205ENST00000455659 SULT6B1Q6IMI4 303 aa9.51□□□□□ -0.89
COMMD1-205ENST00000455659 ACSBG1Q96GR2 724 aa9.51□□□□□ -0.89
COMMD1-205ENST00000455659 C5P01031 1676 aa9.51□□□□□ -0.89
COMMD1-205ENST00000455659 TUBGCP6Q96RT7 1819 aa9.5□□□□□ -0.89
COMMD1-205ENST00000455659 ZNF316A6NFI3 1004 aaPredicted RBP9.5□□□□□ -0.89
COMMD1-205ENST00000455659 APBA3O96018 575 aa9.5□□□□□ -0.89
COMMD1-205ENST00000455659 BCL11BQ9C0K0 894 aaPredicted RBP9.5□□□□□ -0.89
COMMD1-205ENST00000455659 SPG7Q9UQ90 795 aa9.5□□□□□ -0.89
COMMD1-205ENST00000455659 ADAMTS7Q9UKP4 1686 aa9.5□□□□□ -0.89
COMMD1-205ENST00000455659 KDM6AO15550 1401 aaPredicted RBP9.49□□□□□ -0.89
COMMD1-205ENST00000455659 MRC1P22897 1456 aa9.49□□□□□ -0.89
COMMD1-205ENST00000455659 U2SURPO15042 1029 aaKnown RBP9.49□□□□□ -0.89
COMMD1-205ENST00000455659 CYP27B1O15528 508 aa9.49□□□□□ -0.89
COMMD1-205ENST00000455659 HMOX1P09601 288 aa9.49□□□□□ -0.89
COMMD1-205ENST00000455659 EN1Q05925 392 aaPredicted RBP9.49□□□□□ -0.89
COMMD1-205ENST00000455659 RALBP1Q15311 655 aa9.49□□□□□ -0.89
COMMD1-205ENST00000455659 SYTL4Q96C24 671 aaPredicted RBP9.49□□□□□ -0.89
COMMD1-205ENST00000455659 MYBBP1AQ9BQG0 1328 aaKnown RBP9.49□□□□□ -0.89
COMMD1-205ENST00000455659 TAF1LQ8IZX4 1826 aa9.49□□□□□ -0.89
COMMD1-205ENST00000455659 DLG5Q8TDM6 1919 aa9.48□□□□□ -0.89
COMMD1-205ENST00000455659 KCNQ2O43526 872 aa9.48□□□□□ -0.89
COMMD1-205ENST00000455659 ZNF530Q6P9A1 599 aaPredicted RBP9.48□□□□□ -0.89
COMMD1-205ENST00000455659 PTF1AQ7RTS3 328 aa9.48□□□□□ -0.89
COMMD1-205ENST00000455659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.48□□□□□ -0.89
COMMD1-205ENST00000455659 QSER1Q2KHR3 1735 aa9.48□□□□□ -0.89
COMMD1-205ENST00000455659 SIPA1L3O60292 1781 aaPredicted RBP9.47□□□□□ -0.89
COMMD1-205ENST00000455659 PHKG2P15735 406 aa9.47□□□□□ -0.89
COMMD1-205ENST00000455659 EZH2Q15910 746 aaKnown RBP9.47□□□□□ -0.89
COMMD1-205ENST00000455659 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
COMMD1-205ENST00000455659 C1orf141Q5JVX7 400 aa9.47□□□□□ -0.89
COMMD1-205ENST00000455659 NUDCQ9Y266 331 aa9.47□□□□□ -0.89
COMMD1-205ENST00000455659 CASZ1Q86V15 1759 aa9.46□□□□□ -0.9
COMMD1-205ENST00000455659 AMOTQ4VCS5 1084 aa9.46□□□□□ -0.9
COMMD1-205ENST00000455659 IFNL2Q8IZJ0 200 aa9.46□□□□□ -0.9
COMMD1-205ENST00000455659 CAMKK2Q96RR4 588 aa9.46□□□□□ -0.9
COMMD1-205ENST00000455659 CICQ96RK0 1608 aaPredicted RBP9.45□□□□□ -0.9
COMMD1-205ENST00000455659 COL5A3P25940 1745 aaPredicted RBP9.45□□□□□ -0.9
COMMD1-205ENST00000455659 UBR2Q8IWV8 1755 aa9.45□□□□□ -0.9
COMMD1-205ENST00000455659 HSP90AB1P08238 724 aaKnown RBP9.45□□□□□ -0.9
COMMD1-205ENST00000455659 U2AF1L5P0DN76 240 aaPredicted RBP9.45□□□□□ -0.9
COMMD1-205ENST00000455659 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
COMMD1-205ENST00000455659 U2AF1Q01081 240 aaKnown RBP eCLIP9.45□□□□□ -0.9
COMMD1-205ENST00000455659 PALLDQ8WX93 1383 aa9.45□□□□□ -0.9
COMMD1-205ENST00000455659 MAP3K5Q99683 1374 aa9.45□□□□□ -0.9
COMMD1-205ENST00000455659 LRP5O75197 1615 aa9.45□□□□□ -0.9
COMMD1-205ENST00000455659 ZNF831Q5JPB2 1677 aa9.45□□□□□ -0.9
COMMD1-205ENST00000455659 C4BP0C0L5 1744 aa9.45□□□□□ -0.9
COMMD1-205ENST00000455659 PRKAR2BP31323 418 aa9.44□□□□□ -0.9
COMMD1-205ENST00000455659 NKX1-1Q15270 411 aaPredicted RBP9.44□□□□□ -0.9
COMMD1-205ENST00000455659 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
COMMD1-205ENST00000455659 PRKRIP1Q9H875 184 aaPredicted RBP9.44□□□□□ -0.9
COMMD1-205ENST00000455659 TMOD3Q9NYL9 352 aa9.44□□□□□ -0.9
COMMD1-205ENST00000455659 TJP1Q07157 1748 aa9.44□□□□□ -0.9
COMMD1-205ENST00000455659 PLSCR1O15162 318 aa9.43□□□□□ -0.9
COMMD1-205ENST00000455659 TXNRD1Q16881 649 aa9.43□□□□□ -0.9
COMMD1-205ENST00000455659 MPRIPQ6WCQ1 1025 aa9.43□□□□□ -0.9
COMMD1-205ENST00000455659 GAS2L2Q8NHY3 880 aa9.43□□□□□ -0.9
COMMD1-205ENST00000455659 UBR3Q6ZT12 1888 aa9.42□□□□□ -0.9
COMMD1-205ENST00000455659 AKAP4Q5JQC9 854 aa9.42□□□□□ -0.9
COMMD1-205ENST00000455659 DCAF5Q96JK2 942 aa9.42□□□□□ -0.9
COMMD1-205ENST00000455659 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
COMMD1-205ENST00000455659 MAPK8IP3Q9UPT6 1336 aa9.41□□□□□ -0.9
COMMD1-205ENST00000455659 PSDA5PKW4 1024 aaPredicted RBP9.41□□□□□ -0.9
COMMD1-205ENST00000455659 MTHFSDQ2M296 383 aaKnown RBP9.41□□□□□ -0.9
COMMD1-205ENST00000455659 KCPQ6ZWJ8 1503 aa9.41□□□□□ -0.9
COMMD1-205ENST00000455659 LAMB4A4D0S4 1761 aa9.4□□□□□ -0.9
COMMD1-205ENST00000455659 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.9
COMMD1-205ENST00000455659 C4AP0C0L4 1744 aa9.4□□□□□ -0.9
COMMD1-205ENST00000455659 ANP32CO43423 234 aa9.4□□□□□ -0.9
COMMD1-205ENST00000455659 NEFMP07197 916 aa9.4□□□□□ -0.9
COMMD1-205ENST00000455659 R3HDM1Q15032 1099 aaKnown RBP9.4□□□□□ -0.9
COMMD1-205ENST00000455659 WDR43Q15061 677 aaKnown RBP eCLIP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms