RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 COG6Q9Y2V7 657 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 TNS3Q68CZ2 1445 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 RGPD2P0DJD1 1756 aa11.91□□□□□ -0.5
VSIG4-204ENST00000455586 ZKSCAN2Q63HK3 967 aa11.91□□□□□ -0.5
VSIG4-204ENST00000455586 KIF16BQ96L93 1317 aa11.91□□□□□ -0.5
VSIG4-204ENST00000455586 ZNF853P0CG23 659 aa11.91□□□□□ -0.5
VSIG4-204ENST00000455586 C8orf58Q8NAV2 365 aa11.91□□□□□ -0.5
VSIG4-204ENST00000455586 RLBP1P12271 317 aa11.9□□□□□ -0.5
VSIG4-204ENST00000455586 ALDH1L2Q3SY69 923 aa11.9□□□□□ -0.5
VSIG4-204ENST00000455586 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
VSIG4-204ENST00000455586 FTSJ3Q8IY81 847 aaKnown RBP11.89□□□□□ -0.51
VSIG4-204ENST00000455586 KIAA0232Q92628 1395 aa11.89□□□□□ -0.51
VSIG4-204ENST00000455586 SOS2Q07890 1332 aaPredicted RBP11.89□□□□□ -0.51
VSIG4-204ENST00000455586 SKAP1Q86WV1 359 aa11.89□□□□□ -0.51
VSIG4-204ENST00000455586 RTF1Q92541 710 aaKnown RBP11.89□□□□□ -0.51
VSIG4-204ENST00000455586 RGPD5Q99666 1765 aa11.89□□□□□ -0.51
VSIG4-204ENST00000455586 DZIP1LQ8IYY4 767 aaKnown RBP11.88□□□□□ -0.51
VSIG4-204ENST00000455586 NLRP2Q9NX02 1062 aa11.88□□□□□ -0.51
VSIG4-204ENST00000455586 ERBB3P21860 1342 aa11.88□□□□□ -0.51
VSIG4-204ENST00000455586 VAMP4O75379 141 aa11.88□□□□□ -0.51
VSIG4-204ENST00000455586 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
VSIG4-204ENST00000455586 MVPQ14764 893 aaKnown RBP11.88□□□□□ -0.51
VSIG4-204ENST00000455586 IL17REQ8NFR9 667 aa11.88□□□□□ -0.51
VSIG4-204ENST00000455586 GAS2L2Q8NHY3 880 aa11.88□□□□□ -0.51
VSIG4-204ENST00000455586 PHRF1Q9P1Y6 1649 aaKnown RBP11.87□□□□□ -0.51
VSIG4-204ENST00000455586 GNAT3A8MTJ3 354 aa11.87□□□□□ -0.51
VSIG4-204ENST00000455586 IPO8O15397 1037 aaKnown RBP11.87□□□□□ -0.51
VSIG4-204ENST00000455586 CSB-PGBD3P0DP91 1061 aa11.87□□□□□ -0.51
VSIG4-204ENST00000455586 ATF7IPQ6VMQ6 1270 aa11.87□□□□□ -0.51
VSIG4-204ENST00000455586 LGR6Q9HBX8 967 aa11.87□□□□□ -0.51
VSIG4-204ENST00000455586 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
VSIG4-204ENST00000455586 TRIM27P14373 513 aa11.86□□□□□ -0.51
VSIG4-204ENST00000455586 BRPF1P55201 1214 aaPredicted RBP11.86□□□□□ -0.51
VSIG4-204ENST00000455586 TWISTNBQ3B726 338 aaPredicted RBP11.86□□□□□ -0.51
VSIG4-204ENST00000455586 CRB1P82279 1406 aa11.86□□□□□ -0.51
VSIG4-204ENST00000455586 CHL1O00533 1208 aa11.86□□□□□ -0.51
VSIG4-204ENST00000455586 MPRIPQ6WCQ1 1025 aa11.85□□□□□ -0.51
VSIG4-204ENST00000455586 PIP4K2BP78356 416 aa11.85□□□□□ -0.51
VSIG4-204ENST00000455586 PRDM11Q9NQV5 511 aa11.85□□□□□ -0.51
VSIG4-204ENST00000455586 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
VSIG4-204ENST00000455586 ZNF530Q6P9A1 599 aaPredicted RBP11.84□□□□□ -0.51
VSIG4-204ENST00000455586 DDX19BQ9UMR2 479 aa11.84□□□□□ -0.51
VSIG4-204ENST00000455586 IGHDP01880 384 aa11.84□□□□□ -0.51
VSIG4-204ENST00000455586 PDE4AP27815 886 aa11.84□□□□□ -0.51
VSIG4-204ENST00000455586 MAP3K5Q99683 1374 aa11.83□□□□□ -0.52
VSIG4-204ENST00000455586 LTBP4Q8N2S1 1624 aa11.83□□□□□ -0.52
VSIG4-204ENST00000455586 NECTIN2Q92692 538 aa11.83□□□□□ -0.52
VSIG4-204ENST00000455586 BACH2Q9BYV9 841 aa11.83□□□□□ -0.52
VSIG4-204ENST00000455586 STRN4Q9NRL3 753 aa11.83□□□□□ -0.52
VSIG4-204ENST00000455586 LRRC37A3O60309 1634 aa11.83□□□□□ -0.52
VSIG4-204ENST00000455586 ITPRIPQ8IWB1 547 aa11.82□□□□□ -0.52
VSIG4-204ENST00000455586 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
VSIG4-204ENST00000455586 ARHGAP45Q92619 1136 aa11.82□□□□□ -0.52
VSIG4-204ENST00000455586 KCNQ3O43525 872 aa11.81□□□□□ -0.52
VSIG4-204ENST00000455586 ANP32AP39687 249 aaKnown RBP11.81□□□□□ -0.52
VSIG4-204ENST00000455586 PLEKHO1Q53GL0 409 aaPredicted RBP11.81□□□□□ -0.52
VSIG4-204ENST00000455586 USP35Q9P2H5 1018 aa11.81□□□□□ -0.52
VSIG4-204ENST00000455586 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
VSIG4-204ENST00000455586 CRYBG1Q9Y4K1 1723 aa11.81□□□□□ -0.52
VSIG4-204ENST00000455586 COL18A1P39060 1754 aa11.81□□□□□ -0.52
VSIG4-204ENST00000455586 RWDD1Q9H446 243 aaPredicted RBP11.81□□□□□ -0.52
VSIG4-204ENST00000455586 HTATSF1O43719 755 aaKnown RBP11.8□□□□□ -0.52
VSIG4-204ENST00000455586 TMEM57Q8N5G2 664 aa11.8□□□□□ -0.52
VSIG4-204ENST00000455586 RAPGEF4Q8WZA2 1011 aa11.8□□□□□ -0.52
VSIG4-204ENST00000455586 ROBO1Q9Y6N7 1651 aa11.8□□□□□ -0.52
VSIG4-204ENST00000455586 CAMTA1Q9Y6Y1 1673 aa11.8□□□□□ -0.52
VSIG4-204ENST00000455586 TOM1L2Q6ZVM7 507 aa11.79□□□□□ -0.52
VSIG4-204ENST00000455586 MEGF6O75095 1541 aa11.79□□□□□ -0.52
VSIG4-204ENST00000455586 CPDO75976 1380 aa11.79□□□□□ -0.52
VSIG4-204ENST00000455586 TAF7Q15545 349 aaPredicted RBP11.79□□□□□ -0.52
VSIG4-204ENST00000455586 AKAP4Q5JQC9 854 aa11.79□□□□□ -0.52
VSIG4-204ENST00000455586 C1orf141Q5JVX7 400 aa11.79□□□□□ -0.52
VSIG4-204ENST00000455586 LARP1Q6PKG0 1096 aaKnown RBP11.79□□□□□ -0.52
VSIG4-204ENST00000455586 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
VSIG4-204ENST00000455586 NHSL1Q5SYE7 1610 aa11.78□□□□□ -0.52
VSIG4-204ENST00000455586 RGS3P49796 1198 aa11.78□□□□□ -0.52
VSIG4-204ENST00000455586 NCAPD2Q15021 1401 aa11.78□□□□□ -0.52
VSIG4-204ENST00000455586 ABCC4O15439 1325 aa11.78□□□□□ -0.52
VSIG4-204ENST00000455586 RNMTO43148 476 aaKnown RBP11.78□□□□□ -0.52
VSIG4-204ENST00000455586 TATP17735 454 aaPredicted RBP11.78□□□□□ -0.52
VSIG4-204ENST00000455586 AMOTQ4VCS5 1084 aa11.78□□□□□ -0.52
VSIG4-204ENST00000455586 ZBTB40Q9NUA8 1239 aa11.78□□□□□ -0.52
VSIG4-204ENST00000455586 VIRMAQ69YN4 1812 aaKnown RBP11.77□□□□□ -0.52
VSIG4-204ENST00000455586 HDAC1Q13547 482 aaPredicted RBP11.77□□□□□ -0.53
VSIG4-204ENST00000455586 FAM161AQ3B820 660 aa11.77□□□□□ -0.53
VSIG4-204ENST00000455586 G2E3Q7L622 706 aa11.77□□□□□ -0.53
VSIG4-204ENST00000455586 API5Q9BZZ5 524 aaKnown RBP11.77□□□□□ -0.53
VSIG4-204ENST00000455586 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
VSIG4-204ENST00000455586 MSH5O43196 834 aa11.77□□□□□ -0.53
VSIG4-204ENST00000455586 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
VSIG4-204ENST00000455586 SLC4A2P04920 1241 aa11.77□□□□□ -0.53
VSIG4-204ENST00000455586 EVA1CP58658 441 aa11.77□□□□□ -0.53
VSIG4-204ENST00000455586 TEFQ10587 303 aa11.77□□□□□ -0.53
VSIG4-204ENST00000455586 BTG4Q9NY30 223 aa11.77□□□□□ -0.53
VSIG4-204ENST00000455586 BTBD11A6QL63 1104 aa11.76□□□□□ -0.53
VSIG4-204ENST00000455586 CYP27B1O15528 508 aa11.76□□□□□ -0.53
VSIG4-204ENST00000455586 WDR17Q8IZU2 1322 aa11.76□□□□□ -0.53
VSIG4-204ENST00000455586 PRAMEF22A3QJZ6 481 aa11.75□□□□□ -0.53
VSIG4-204ENST00000455586 NUTM2BA6NNL0 878 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms