RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 HDGFL2Q7Z4V5 671 aaPredicted RBP14.12□□□□□ -0.15
CLCN4-204ENST00000454850 C5P01031 1676 aa14.11□□□□□ -0.15
CLCN4-204ENST00000454850 YBX3P16989 372 aaKnown RBP eCLIP14.11□□□□□ -0.15
CLCN4-204ENST00000454850 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
CLCN4-204ENST00000454850 EDC4Q6P2E9 1401 aaKnown RBP14.11□□□□□ -0.15
CLCN4-204ENST00000454850 TAF1LQ8IZX4 1826 aa14.11□□□□□ -0.15
CLCN4-204ENST00000454850 ANKRD36BQ8N2N9 1353 aa14.1□□□□□ -0.15
CLCN4-204ENST00000454850 MSL1Q68DK7 614 aa14.1□□□□□ -0.15
CLCN4-204ENST00000454850 SLC12A5Q9H2X9 1139 aa14.1□□□□□ -0.15
CLCN4-204ENST00000454850 NSD2O96028 1365 aa14.09□□□□□ -0.15
CLCN4-204ENST00000454850 CCNL1Q9UK58 526 aaPredicted RBP14.09□□□□□ -0.15
CLCN4-204ENST00000454850 A0A1W2PP64 1363 aa14.09□□□□□ -0.15
CLCN4-204ENST00000454850 ATP10DQ9P241 1426 aa14.08□□□□□ -0.15
CLCN4-204ENST00000454850 GRIN3BO60391 1043 aa14.08□□□□□ -0.16
CLCN4-204ENST00000454850 IP6K1Q92551 441 aa14.08□□□□□ -0.16
CLCN4-204ENST00000454850 MEGF6O75095 1541 aa14.08□□□□□ -0.16
CLCN4-204ENST00000454850 TERF2IPQ9NYB0 399 aa14.07□□□□□ -0.16
CLCN4-204ENST00000454850 COL23A1Q86Y22 540 aaPredicted RBP14.06□□□□□ -0.16
CLCN4-204ENST00000454850 CARD11Q9BXL7 1154 aa14.06□□□□□ -0.16
CLCN4-204ENST00000454850 ITGB4P16144 1822 aa14.06□□□□□ -0.16
CLCN4-204ENST00000454850 AMPHP49418 695 aa14.05□□□□□ -0.16
CLCN4-204ENST00000454850 ZCRB1Q8TBF4 217 aaKnown RBP14.05□□□□□ -0.16
CLCN4-204ENST00000454850 ZNF526Q8TF50 670 aaPredicted RBP14.05□□□□□ -0.16
CLCN4-204ENST00000454850 MAP3K19Q56UN5 1328 aa14.05□□□□□ -0.16
CLCN4-204ENST00000454850 USP47Q96K76 1375 aa14.05□□□□□ -0.16
CLCN4-204ENST00000454850 FBLN1P23142 703 aa14.04□□□□□ -0.16
CLCN4-204ENST00000454850 HOXC9P31274 260 aa14.04□□□□□ -0.16
CLCN4-204ENST00000454850 USHBP1Q8N6Y0 703 aa14.03□□□□□ -0.16
CLCN4-204ENST00000454850 COG3Q96JB2 828 aa14.03□□□□□ -0.16
CLCN4-204ENST00000454850 GPBP1L1Q9HC44 474 aaPredicted RBP14.03□□□□□ -0.16
CLCN4-204ENST00000454850 WWC3Q9ULE0 1092 aa14.03□□□□□ -0.16
CLCN4-204ENST00000454850 UBR3Q6ZT12 1888 aa14.02□□□□□ -0.16
CLCN4-204ENST00000454850 C4BP0C0L5 1744 aa14.01□□□□□ -0.17
CLCN4-204ENST00000454850 TOGARAM1Q9Y4F4 1720 aa14.01□□□□□ -0.17
CLCN4-204ENST00000454850 KIF20BQ96Q89 1820 aa14□□□□□ -0.17
CLCN4-204ENST00000454850 ADCY9O60503 1353 aa13.99□□□□□ -0.17
CLCN4-204ENST00000454850 RRS1Q15050 365 aaKnown RBP13.99□□□□□ -0.17
CLCN4-204ENST00000454850 NBPF6Q5VWK0 638 aa13.99□□□□□ -0.17
CLCN4-204ENST00000454850 RAPGEF4Q8WZA2 1011 aa13.99□□□□□ -0.17
CLCN4-204ENST00000454850 NBPF4Q96M43 638 aa13.99□□□□□ -0.17
CLCN4-204ENST00000454850 CD2APQ9Y5K6 639 aa13.99□□□□□ -0.17
CLCN4-204ENST00000454850 RTL1A6NKG5 1358 aa13.98□□□□□ -0.17
CLCN4-204ENST00000454850 PALLDQ8WX93 1383 aa13.98□□□□□ -0.17
CLCN4-204ENST00000454850 HSPA6P17066 643 aa13.98□□□□□ -0.17
CLCN4-204ENST00000454850 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
CLCN4-204ENST00000454850 PHF14O94880 888 aa13.97□□□□□ -0.17
CLCN4-204ENST00000454850 TATP17735 454 aaPredicted RBP13.97□□□□□ -0.17
CLCN4-204ENST00000454850 MPRIPQ6WCQ1 1025 aa13.97□□□□□ -0.17
CLCN4-204ENST00000454850 AK7Q96M32 723 aa13.97□□□□□ -0.17
CLCN4-204ENST00000454850 IGSF1Q8N6C5 1336 aa13.96□□□□□ -0.17
CLCN4-204ENST00000454850 SMIM5Q71RC9 77 aa13.96□□□□□ -0.17
CLCN4-204ENST00000454850 FLAD1Q8NFF5 587 aa13.96□□□□□ -0.17
CLCN4-204ENST00000454850 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
CLCN4-204ENST00000454850 CGNL1Q0VF96 1302 aa13.95□□□□□ -0.18
CLCN4-204ENST00000454850 PCDH11XQ9BZA7 1347 aa13.95□□□□□ -0.18
CLCN4-204ENST00000454850 PCDH11YQ9BZA8 1340 aa13.95□□□□□ -0.18
CLCN4-204ENST00000454850 AMIGO3Q86WK7 504 aa13.95□□□□□ -0.18
CLCN4-204ENST00000454850 N4BP2Q86UW6 1770 aaPredicted RBP13.95□□□□□ -0.18
CLCN4-204ENST00000454850 MAP2P11137 1827 aaKnown RBP13.94□□□□□ -0.18
CLCN4-204ENST00000454850 PUS7Q96PZ0 661 aaKnown RBP13.94□□□□□ -0.18
CLCN4-204ENST00000454850 GGNBP2Q9H3C7 697 aa13.94□□□□□ -0.18
CLCN4-204ENST00000454850 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.92□□□□□ -0.18
CLCN4-204ENST00000454850 TESK2Q96S53 571 aa13.92□□□□□ -0.18
CLCN4-204ENST00000454850 ST20-MTHFSA0A0A6YYL1 179 aa13.91□□□□□ -0.18
CLCN4-204ENST00000454850 CYP27B1O15528 508 aa13.91□□□□□ -0.18
CLCN4-204ENST00000454850 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
CLCN4-204ENST00000454850 SMARCC1Q92922 1105 aaPredicted RBP13.91□□□□□ -0.18
CLCN4-204ENST00000454850 KIF13BQ9NQT8 1826 aa13.91□□□□□ -0.18
CLCN4-204ENST00000454850 TONSLQ96HA7 1378 aa13.91□□□□□ -0.18
CLCN4-204ENST00000454850 NSD3Q9BZ95 1437 aa13.9□□□□□ -0.18
CLCN4-204ENST00000454850 CICQ96RK0 1608 aaPredicted RBP13.9□□□□□ -0.18
CLCN4-204ENST00000454850 KIAA1551Q9HCM1 1747 aa13.9□□□□□ -0.18
CLCN4-204ENST00000454850 INSRP06213 1382 aa13.9□□□□□ -0.18
CLCN4-204ENST00000454850 FLT4P35916 1363 aa13.89□□□□□ -0.19
CLCN4-204ENST00000454850 KIF3CO14782 793 aa13.89□□□□□ -0.19
CLCN4-204ENST00000454850 FYB1O15117 783 aa13.89□□□□□ -0.19
CLCN4-204ENST00000454850 HMGB2P26583 209 aaKnown RBP13.89□□□□□ -0.19
CLCN4-204ENST00000454850 PIGBQ92521 554 aa13.89□□□□□ -0.19
CLCN4-204ENST00000454850 SSFA2P28290 1259 aa13.88□□□□□ -0.19
CLCN4-204ENST00000454850 LINC00116Q8NCU8 138 aa13.88□□□□□ -0.19
CLCN4-204ENST00000454850 BRCA1P38398 1863 aaKnown RBP13.87□□□□□ -0.19
CLCN4-204ENST00000454850 GNPATO15228 680 aa13.87□□□□□ -0.19
CLCN4-204ENST00000454850 WDR90Q96KV7 1748 aa13.87□□□□□ -0.19
CLCN4-204ENST00000454850 PXDNLA1KZ92 1463 aa13.87□□□□□ -0.19
CLCN4-204ENST00000454850 LOC102724428A0A0B4J2F2 783 aa13.86□□□□□ -0.19
CLCN4-204ENST00000454850 MMP10P09238 476 aa13.86□□□□□ -0.19
CLCN4-204ENST00000454850 SIK1P57059 783 aa13.86□□□□□ -0.19
CLCN4-204ENST00000454850 EMILIN1Q9Y6C2 1016 aa13.86□□□□□ -0.19
CLCN4-204ENST00000454850 ANKRD26Q9UPS8 1709 aa13.86□□□□□ -0.19
CLCN4-204ENST00000454850 PPM1GO15355 546 aaPredicted RBP13.85□□□□□ -0.19
CLCN4-204ENST00000454850 TMOD3Q9NYL9 352 aa13.85□□□□□ -0.19
CLCN4-204ENST00000454850 PCNTO95613 3336 aa13.85□□□□□ -0.19
CLCN4-204ENST00000454850 APLP1P51693 650 aa13.84□□□□□ -0.19
CLCN4-204ENST00000454850 ITPK1Q13572 414 aa13.84□□□□□ -0.19
CLCN4-204ENST00000454850 ASAP1Q9ULH1 1129 aa13.84□□□□□ -0.19
CLCN4-204ENST00000454850 BCS1LQ9Y276 419 aa13.84□□□□□ -0.19
CLCN4-204ENST00000454850 ARFGEF1Q9Y6D6 1849 aa13.84□□□□□ -0.19
CLCN4-204ENST00000454850 A0A0G2JLW4 131 aa13.83□□□□□ -0.2
CLCN4-204ENST00000454850 ATP6V1AP38606 617 aa13.83□□□□□ -0.2
CLCN4-204ENST00000454850 SPG7Q9UQ90 795 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms