RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 PER1O15534 1290 aaPredicted RBP9.31□□□□□ -0.92
NCL-206ENST00000454824 FAM196AQ6ZSG2 479 aa9.31□□□□□ -0.92
NCL-206ENST00000454824 CCDC125Q86Z20 511 aa9.31□□□□□ -0.92
NCL-206ENST00000454824 UPF1Q92900 1129 aaKnown RBP eCLIP9.31□□□□□ -0.92
NCL-206ENST00000454824 INSRP06213 1382 aa9.3□□□□□ -0.92
NCL-206ENST00000454824 KIF24Q5T7B8 1368 aa9.3□□□□□ -0.92
NCL-206ENST00000454824 TATP17735 454 aaPredicted RBP9.3□□□□□ -0.92
NCL-206ENST00000454824 USHBP1Q8N6Y0 703 aa9.3□□□□□ -0.92
NCL-206ENST00000454824 SSUH2Q9Y2M2 353 aa9.3□□□□□ -0.92
NCL-206ENST00000454824 ABCC6O95255 1503 aa9.3□□□□□ -0.92
NCL-206ENST00000454824 BRWD3Q6RI45 1802 aa9.29□□□□□ -0.92
NCL-206ENST00000454824 MTHFSP49914 203 aa9.29□□□□□ -0.92
NCL-206ENST00000454824 NBPF6Q5VWK0 638 aa9.29□□□□□ -0.92
NCL-206ENST00000454824 DDX54Q8TDD1 881 aaKnown RBP9.29□□□□□ -0.92
NCL-206ENST00000454824 NBPF4Q96M43 638 aa9.29□□□□□ -0.92
NCL-206ENST00000454824 CFAP53Q96M91 514 aa9.29□□□□□ -0.92
NCL-206ENST00000454824 ZNF316A6NFI3 1004 aaPredicted RBP9.28□□□□□ -0.92
NCL-206ENST00000454824 TRIM37O94972 964 aa9.28□□□□□ -0.92
NCL-206ENST00000454824 ZCRB1Q8TBF4 217 aaKnown RBP9.28□□□□□ -0.92
NCL-206ENST00000454824 ANKRD26Q9UPS8 1709 aa9.28□□□□□ -0.92
NCL-206ENST00000454824 BAG6P46379 1132 aa9.27□□□□□ -0.93
NCL-206ENST00000454824 EIF4A2Q14240 407 aaKnown RBP9.27□□□□□ -0.93
NCL-206ENST00000454824 NPC1L1Q9UHC9 1359 aa9.26□□□□□ -0.93
NCL-206ENST00000454824 DIAPH1O60610 1272 aaKnown RBP9.26□□□□□ -0.93
NCL-206ENST00000454824 APBA3O96018 575 aa9.26□□□□□ -0.93
NCL-206ENST00000454824 VASPP50552 380 aaPredicted RBP9.26□□□□□ -0.93
NCL-206ENST00000454824 EYA1Q99502 592 aa9.26□□□□□ -0.93
NCL-206ENST00000454824 SPG7Q9UQ90 795 aa9.26□□□□□ -0.93
NCL-206ENST00000454824 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
NCL-206ENST00000454824 MARCH10Q8NA82 808 aaPredicted RBP9.25□□□□□ -0.93
NCL-206ENST00000454824 SYTL4Q96C24 671 aaPredicted RBP9.25□□□□□ -0.93
NCL-206ENST00000454824 NUDCQ9Y266 331 aa9.25□□□□□ -0.93
NCL-206ENST00000454824 FAM208AQ9UK61 1670 aaKnown RBP9.24□□□□□ -0.93
NCL-206ENST00000454824 THSD7AQ9UPZ6 1657 aa9.24□□□□□ -0.93
NCL-206ENST00000454824 SULT6B1Q6IMI4 303 aa9.24□□□□□ -0.93
NCL-206ENST00000454824 ACSBG1Q96GR2 724 aa9.24□□□□□ -0.93
NCL-206ENST00000454824 PEAK1Q9H792 1746 aa9.24□□□□□ -0.93
NCL-206ENST00000454824 RGPD2P0DJD1 1756 aa9.24□□□□□ -0.93
NCL-206ENST00000454824 OVOS2A0A0G2JMS6 1433 aa9.23□□□□□ -0.93
NCL-206ENST00000454824 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
NCL-206ENST00000454824 RALBP1Q15311 655 aa9.23□□□□□ -0.93
NCL-206ENST00000454824 PLEKHO1Q53GL0 409 aaPredicted RBP9.23□□□□□ -0.93
NCL-206ENST00000454824 DEFB132Q7Z7B7 95 aa9.23□□□□□ -0.93
NCL-206ENST00000454824 PARP4Q9UKK3 1724 aaKnown RBP9.22□□□□□ -0.93
NCL-206ENST00000454824 HMOX1P09601 288 aa9.22□□□□□ -0.93
NCL-206ENST00000454824 IL13P35225 146 aa9.22□□□□□ -0.93
NCL-206ENST00000454824 EN1Q05925 392 aaPredicted RBP9.22□□□□□ -0.93
NCL-206ENST00000454824 BCL11BQ9C0K0 894 aaPredicted RBP9.22□□□□□ -0.93
NCL-206ENST00000454824 PCDH11XQ9BZA7 1347 aa9.22□□□□□ -0.93
NCL-206ENST00000454824 PCDH11YQ9BZA8 1340 aa9.22□□□□□ -0.93
NCL-206ENST00000454824 DISP2A7MBM2 1401 aa9.22□□□□□ -0.93
NCL-206ENST00000454824 TNS2Q63HR2 1409 aa9.22□□□□□ -0.93
NCL-206ENST00000454824 NEFMP07197 916 aa9.21□□□□□ -0.94
NCL-206ENST00000454824 AMOTQ4VCS5 1084 aa9.21□□□□□ -0.94
NCL-206ENST00000454824 C1orf141Q5JVX7 400 aa9.21□□□□□ -0.94
NCL-206ENST00000454824 EP400Q96L91 3159 aa9.21□□□□□ -0.94
NCL-206ENST00000454824 U2AF1L5P0DN76 240 aaPredicted RBP9.2□□□□□ -0.94
NCL-206ENST00000454824 PRIM1P49642 420 aaKnown RBP9.2□□□□□ -0.94
NCL-206ENST00000454824 U2AF1Q01081 240 aaKnown RBP eCLIP9.2□□□□□ -0.949e-16■□□□□ 10.6
NCL-206ENST00000454824 ZNF530Q6P9A1 599 aaPredicted RBP9.2□□□□□ -0.94
NCL-206ENST00000454824 IFNLR1Q8IU57 520 aaPredicted RBP9.2□□□□□ -0.94
NCL-206ENST00000454824 IFNL2Q8IZJ0 200 aa9.2□□□□□ -0.94
NCL-206ENST00000454824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.943e-16■■■□□ 19.2
NCL-206ENST00000454824 IGSF1Q8N6C5 1336 aa9.2□□□□□ -0.94
NCL-206ENST00000454824 LRRC37A3O60309 1634 aa9.2□□□□□ -0.94
NCL-206ENST00000454824 WNK3Q9BYP7 1800 aa9.19□□□□□ -0.94
NCL-206ENST00000454824 KCNQ2O43526 872 aa9.19□□□□□ -0.94
NCL-206ENST00000454824 HSP90AB1P08238 724 aaKnown RBP9.19□□□□□ -0.94
NCL-206ENST00000454824 EZH2Q15910 746 aaKnown RBP9.19□□□□□ -0.94
NCL-206ENST00000454824 NBPF14Q5TI25 921 aa9.19□□□□□ -0.94
NCL-206ENST00000454824 AEBP1Q8IUX7 1158 aa9.19□□□□□ -0.94
NCL-206ENST00000454824 MEGF6O75095 1541 aa9.19□□□□□ -0.94
NCL-206ENST00000454824 ANP32CO43423 234 aa9.18□□□□□ -0.94
NCL-206ENST00000454824 RGPD1P0DJD0 1748 aa9.18□□□□□ -0.94
NCL-206ENST00000454824 MPRIPQ6WCQ1 1025 aa9.18□□□□□ -0.94
NCL-206ENST00000454824 CYP27B1O15528 508 aa9.17□□□□□ -0.94
NCL-206ENST00000454824 PHKG2P15735 406 aa9.17□□□□□ -0.94
NCL-206ENST00000454824 PTF1AQ7RTS3 328 aa9.17□□□□□ -0.94
NCL-206ENST00000454824 PNNQ9H307 717 aaKnown RBP9.17□□□□□ -0.94
NCL-206ENST00000454824 PARD3Q8TEW0 1356 aa9.16□□□□□ -0.94
NCL-206ENST00000454824 MYBBP1AQ9BQG0 1328 aaKnown RBP9.16□□□□□ -0.94
NCL-206ENST00000454824 PLSCR1O15162 318 aa9.16□□□□□ -0.94
NCL-206ENST00000454824 CABP4P57796 275 aa9.16□□□□□ -0.94
NCL-206ENST00000454824 WDR43Q15061 677 aaKnown RBP eCLIP9.16□□□□□ -0.942e-6■■□□□ 12.4
NCL-206ENST00000454824 CAMKK2Q96RR4 588 aa9.16□□□□□ -0.94
NCL-206ENST00000454824 TMOD3Q9NYL9 352 aa9.16□□□□□ -0.94
NCL-206ENST00000454824 BCL9O00512 1426 aa9.15□□□□□ -0.94
NCL-206ENST00000454824 FCHSD2O94868 740 aa9.15□□□□□ -0.94
NCL-206ENST00000454824 PRKAR2BP31323 418 aa9.15□□□□□ -0.94
NCL-206ENST00000454824 DCAF5Q96JK2 942 aa9.15□□□□□ -0.94
NCL-206ENST00000454824 PRKRIP1Q9H875 184 aaPredicted RBP9.15□□□□□ -0.94
NCL-206ENST00000454824 SBF2Q86WG5 1849 aa9.15□□□□□ -0.95
NCL-206ENST00000454824 NKX1-1Q15270 411 aaPredicted RBP9.14□□□□□ -0.95
NCL-206ENST00000454824 TXNRD1Q16881 649 aa9.14□□□□□ -0.95
NCL-206ENST00000454824 AKAP4Q5JQC9 854 aa9.14□□□□□ -0.95
NCL-206ENST00000454824 GAS2L2Q8NHY3 880 aa9.14□□□□□ -0.95
NCL-206ENST00000454824 RTF1Q92541 710 aaKnown RBP9.14□□□□□ -0.95
NCL-206ENST00000454824 SMARCC1Q92922 1105 aaPredicted RBP9.14□□□□□ -0.95
NCL-206ENST00000454824 NCAPD2Q15021 1401 aa9.14□□□□□ -0.95
NCL-206ENST00000454824 MAPK8IP3Q9UPT6 1336 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms