RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SPINK5Q9NQ38 1064 aaPredicted RBP6.82□□□□□ -1.32
RIF1-207ENST00000454583 GCP02774 474 aa6.81□□□□□ -1.32
RIF1-207ENST00000454583 SPATA31A6Q5VVP1 1343 aa6.81□□□□□ -1.32
RIF1-207ENST00000454583 FAM83GA6ND36 823 aa6.81□□□□□ -1.32
RIF1-207ENST00000454583 LRP10Q7Z4F1 713 aa6.8□□□□□ -1.32
RIF1-207ENST00000454583 ADAMTS8Q9UP79 889 aa6.8□□□□□ -1.32
RIF1-207ENST00000454583 MTHFSP49914 203 aa6.8□□□□□ -1.32
RIF1-207ENST00000454583 COL11A2P13942 1736 aaPredicted RBP6.8□□□□□ -1.32
RIF1-207ENST00000454583 DCAF8L1A6NGE4 600 aa6.79□□□□□ -1.32
RIF1-207ENST00000454583 HDGFL2Q7Z4V5 671 aaPredicted RBP6.79□□□□□ -1.32
RIF1-207ENST00000454583 TNRC6CQ9HCJ0 1690 aaKnown RBP6.79□□□□□ -1.32
RIF1-207ENST00000454583 WDR17Q8IZU2 1322 aa6.79□□□□□ -1.32
RIF1-207ENST00000454583 HSP90AB2PQ58FF8 381 aa6.79□□□□□ -1.32
RIF1-207ENST00000454583 PHACTR3Q96KR7 559 aa6.79□□□□□ -1.32
RIF1-207ENST00000454583 PSME4Q14997 1843 aa6.79□□□□□ -1.32
RIF1-207ENST00000454583 ESCO1Q5FWF5 840 aa6.79□□□□□ -1.32
RIF1-207ENST00000454583 NBPF6Q5VWK0 638 aa6.79□□□□□ -1.32
RIF1-207ENST00000454583 NBPF4Q96M43 638 aa6.79□□□□□ -1.32
RIF1-207ENST00000454583 EYA1Q99502 592 aa6.79□□□□□ -1.32
RIF1-207ENST00000454583 SPATA31A5Q5VU36 1347 aa6.78□□□□□ -1.32
RIF1-207ENST00000454583 SPATA31A7Q8IWB4 1347 aa6.78□□□□□ -1.32
RIF1-207ENST00000454583 FOXO3O43524 673 aa6.78□□□□□ -1.32
RIF1-207ENST00000454583 PXDNLA1KZ92 1463 aa6.78□□□□□ -1.32
RIF1-207ENST00000454583 SPATA31A1Q5TZJ5 1347 aa6.78□□□□□ -1.32
RIF1-207ENST00000454583 BRPF1P55201 1214 aaPredicted RBP6.78□□□□□ -1.32
RIF1-207ENST00000454583 RRS1Q15050 365 aaKnown RBP6.77□□□□□ -1.33
RIF1-207ENST00000454583 CC2D1BQ5T0F9 858 aaKnown RBP6.77□□□□□ -1.33
RIF1-207ENST00000454583 KCNH5Q8NCM2 988 aa6.77□□□□□ -1.33
RIF1-207ENST00000454583 KNSTRNQ9Y448 316 aa6.77□□□□□ -1.33
RIF1-207ENST00000454583 IL16Q14005 1332 aa6.77□□□□□ -1.33
RIF1-207ENST00000454583 LAMB1P07942 1786 aa6.77□□□□□ -1.33
RIF1-207ENST00000454583 BARGINQ6ZT62 677 aa6.77□□□□□ -1.33
RIF1-207ENST00000454583 DOCK2Q92608 1830 aa6.76□□□□□ -1.33
RIF1-207ENST00000454583 SPEF2Q9C093 1822 aa6.76□□□□□ -1.33
RIF1-207ENST00000454583 DUSP27Q5VZP5 1158 aa6.76□□□□□ -1.33
RIF1-207ENST00000454583 FCHSD2O94868 740 aa6.76□□□□□ -1.33
RIF1-207ENST00000454583 AEBP1Q8IUX7 1158 aa6.76□□□□□ -1.33
RIF1-207ENST00000454583 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.76□□□□□ -1.331e-8■■■■■ 28.1
RIF1-207ENST00000454583 ZBTB12Q9Y330 459 aaPredicted RBP6.75□□□□□ -1.33
RIF1-207ENST00000454583 ATF3P18847 181 aa6.75□□□□□ -1.33
RIF1-207ENST00000454583 HSPA1LP34931 641 aa6.75□□□□□ -1.33
RIF1-207ENST00000454583 SUPT16HQ9Y5B9 1047 aaKnown RBP6.75□□□□□ -1.33
RIF1-207ENST00000454583 CARD10Q9BWT7 1032 aa6.74□□□□□ -1.33
RIF1-207ENST00000454583 GTF3C3Q9Y5Q9 886 aa6.74□□□□□ -1.33
RIF1-207ENST00000454583 PSME1Q06323 249 aa6.74□□□□□ -1.33
RIF1-207ENST00000454583 COG3Q96JB2 828 aa6.74□□□□□ -1.33
RIF1-207ENST00000454583 SLFN5Q08AF3 891 aa6.74□□□□□ -1.33
RIF1-207ENST00000454583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.74□□□□□ -1.33
RIF1-207ENST00000454583 LRRC59Q96AG4 307 aaKnown RBP6.74□□□□□ -1.33
RIF1-207ENST00000454583 WWC1Q8IX03 1113 aa6.73□□□□□ -1.33
RIF1-207ENST00000454583 HTATSF1O43719 755 aaKnown RBP6.73□□□□□ -1.33
RIF1-207ENST00000454583 VPS72Q15906 364 aa6.73□□□□□ -1.33
RIF1-207ENST00000454583 ABTB2Q8N961 1025 aa6.73□□□□□ -1.33
RIF1-207ENST00000454583 MAP3K5Q99683 1374 aa6.72□□□□□ -1.33
RIF1-207ENST00000454583 XPCQ01831 940 aaPredicted RBP6.72□□□□□ -1.33
RIF1-207ENST00000454583 MORC1Q86VD1 984 aa6.72□□□□□ -1.33
RIF1-207ENST00000454583 NUTM2FA1L443 756 aa6.72□□□□□ -1.33
RIF1-207ENST00000454583 CYP27B1O15528 508 aa6.72□□□□□ -1.33
RIF1-207ENST00000454583 MTHFSDQ2M296 383 aaKnown RBP6.72□□□□□ -1.33
RIF1-207ENST00000454583 NGEFQ8N5V2 710 aa6.72□□□□□ -1.33
RIF1-207ENST00000454583 THRAP3Q9Y2W1 955 aaKnown RBP6.72□□□□□ -1.33
RIF1-207ENST00000454583 FOCADQ5VW36 1801 aa6.72□□□□□ -1.33
RIF1-207ENST00000454583 TMPOP42166 694 aaKnown RBP6.72□□□□□ -1.33
RIF1-207ENST00000454583 IL17REQ8NFR9 667 aa6.72□□□□□ -1.33
RIF1-207ENST00000454583 CABLES1Q8TDN4 633 aa6.72□□□□□ -1.33
RIF1-207ENST00000454583 RUNDC1Q96C34 613 aa6.72□□□□□ -1.33
RIF1-207ENST00000454583 ANP32CO43423 234 aa6.71□□□□□ -1.33
RIF1-207ENST00000454583 CDK5RAP2Q96SN8 1893 aa6.71□□□□□ -1.34
RIF1-207ENST00000454583 CHL1O00533 1208 aa6.71□□□□□ -1.34
RIF1-207ENST00000454583 TMC1Q8TDI8 760 aa6.71□□□□□ -1.34
RIF1-207ENST00000454583 FBXO41Q8TF61 875 aa6.71□□□□□ -1.34
RIF1-207ENST00000454583 BABAM1Q9NWV8 329 aa6.71□□□□□ -1.34
RIF1-207ENST00000454583 WDR63Q8IWG1 891 aa6.7□□□□□ -1.34
RIF1-207ENST00000454583 ARFGEF1Q9Y6D6 1849 aa6.7□□□□□ -1.34
RIF1-207ENST00000454583 PAPPA2Q9BXP8 1791 aa6.7□□□□□ -1.34
RIF1-207ENST00000454583 DIAPH1O60610 1272 aaKnown RBP6.7□□□□□ -1.34
RIF1-207ENST00000454583 CENPBP07199 599 aaPredicted RBP6.7□□□□□ -1.34
RIF1-207ENST00000454583 NLRP6P59044 892 aa6.7□□□□□ -1.34
RIF1-207ENST00000454583 ANKRD24Q8TF21 1146 aa6.7□□□□□ -1.34
RIF1-207ENST00000454583 DDX60LQ5H9U9 1706 aaKnown RBP6.7□□□□□ -1.34
RIF1-207ENST00000454583 TOM1O60784 492 aa6.7□□□□□ -1.34
RIF1-207ENST00000454583 SNED1Q8TER0 1413 aa6.69□□□□□ -1.34
RIF1-207ENST00000454583 ATP10DQ9P241 1426 aa6.69□□□□□ -1.34
RIF1-207ENST00000454583 NFE2L2Q16236 605 aa6.69□□□□□ -1.34
RIF1-207ENST00000454583 NGDNQ8NEJ9 315 aaKnown RBP6.69□□□□□ -1.34
RIF1-207ENST00000454583 PDIA6Q15084 440 aa6.69□□□□□ -1.34
RIF1-207ENST00000454583 LARP1Q6PKG0 1096 aaKnown RBP6.69□□□□□ -1.34
RIF1-207ENST00000454583 PHKG2P15735 406 aa6.69□□□□□ -1.34
RIF1-207ENST00000454583 SLC4A9Q96Q91 983 aa6.69□□□□□ -1.34
RIF1-207ENST00000454583 TAF1P21675 1872 aa6.69□□□□□ -1.34
RIF1-207ENST00000454583 COL15A1P39059 1388 aa6.68□□□□□ -1.34
RIF1-207ENST00000454583 AKAP11Q9UKA4 1901 aa6.68□□□□□ -1.34
RIF1-207ENST00000454583 TCP11L2Q8N4U5 519 aa6.68□□□□□ -1.34
RIF1-207ENST00000454583 UNC5CLQ8IV45 518 aa6.67□□□□□ -1.34
RIF1-207ENST00000454583 FANCIQ9NVI1 1328 aa6.67□□□□□ -1.34
RIF1-207ENST00000454583 CDCA7LQ96GN5 454 aa6.67□□□□□ -1.34
RIF1-207ENST00000454583 MKRN4PQ13434 485 aaPredicted RBP6.66□□□□□ -1.34
RIF1-207ENST00000454583 MRS2Q9HD23 443 aa6.66□□□□□ -1.34
RIF1-207ENST00000454583 CACNA1SQ13698 1873 aa6.66□□□□□ -1.34
RIF1-207ENST00000454583 MYO5AQ9Y4I1 1855 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms