RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 MON2Q7Z3U7 1717 aa9.99□□□□□ -0.81
CHEK2-220ENST00000454252 BTAF1O14981 1849 aa9.99□□□□□ -0.81
CHEK2-220ENST00000454252 POLD1P28340 1107 aa9.99□□□□□ -0.81
CHEK2-220ENST00000454252 RRS1Q15050 365 aaKnown RBP9.99□□□□□ -0.81
CHEK2-220ENST00000454252 SLC27A3Q5K4L6 730 aa9.99□□□□□ -0.81
CHEK2-220ENST00000454252 SMIM5Q71RC9 77 aa9.99□□□□□ -0.81
CHEK2-220ENST00000454252 WWC3Q9ULE0 1092 aa9.99□□□□□ -0.81
CHEK2-220ENST00000454252 GIGYF1O75420 1035 aaPredicted RBP9.98□□□□□ -0.81
CHEK2-220ENST00000454252 HOXC9P31274 260 aa9.98□□□□□ -0.81
CHEK2-220ENST00000454252 AMIGO3Q86WK7 504 aa9.98□□□□□ -0.81
CHEK2-220ENST00000454252 COL23A1Q86Y22 540 aaPredicted RBP9.98□□□□□ -0.81
CHEK2-220ENST00000454252 CCNL1Q9UK58 526 aaPredicted RBP9.98□□□□□ -0.81
CHEK2-220ENST00000454252 ANKRD36BQ8N2N9 1353 aa9.98□□□□□ -0.81
CHEK2-220ENST00000454252 NBPF6Q5VWK0 638 aa9.97□□□□□ -0.81
CHEK2-220ENST00000454252 NBPF4Q96M43 638 aa9.97□□□□□ -0.81
CHEK2-220ENST00000454252 AMPHP49418 695 aa9.96□□□□□ -0.82
CHEK2-220ENST00000454252 ZCRB1Q8TBF4 217 aaKnown RBP9.96□□□□□ -0.82
CHEK2-220ENST00000454252 SLC16A10Q8TF71 515 aa9.96□□□□□ -0.82
CHEK2-220ENST00000454252 TESK2Q96S53 571 aa9.96□□□□□ -0.82
CHEK2-220ENST00000454252 TERF2IPQ9NYB0 399 aa9.96□□□□□ -0.82
CHEK2-220ENST00000454252 USP54Q70EL1 1684 aa9.96□□□□□ -0.82
CHEK2-220ENST00000454252 COG3Q96JB2 828 aa9.95□□□□□ -0.82
CHEK2-220ENST00000454252 SHANK3Q9BYB0 1731 aa9.95□□□□□ -0.82
CHEK2-220ENST00000454252 LTN1O94822 1766 aa9.95□□□□□ -0.82
CHEK2-220ENST00000454252 FAM208AQ9UK61 1670 aaKnown RBP9.94□□□□□ -0.82
CHEK2-220ENST00000454252 ATP10DQ9P241 1426 aa9.94□□□□□ -0.82
CHEK2-220ENST00000454252 ST20-MTHFSA0A0A6YYL1 179 aa9.94□□□□□ -0.82
CHEK2-220ENST00000454252 ZNF526Q8TF50 670 aaPredicted RBP9.94□□□□□ -0.82
CHEK2-220ENST00000454252 GGNBP2Q9H3C7 697 aa9.94□□□□□ -0.82
CHEK2-220ENST00000454252 USP47Q96K76 1375 aa9.93□□□□□ -0.82
CHEK2-220ENST00000454252 DOT1LQ8TEK3 1739 aa9.93□□□□□ -0.82
CHEK2-220ENST00000454252 PALLDQ8WX93 1383 aa9.92□□□□□ -0.82
CHEK2-220ENST00000454252 PHF14O94880 888 aa9.92□□□□□ -0.82
CHEK2-220ENST00000454252 HSP90AB2PQ58FF8 381 aa9.92□□□□□ -0.82
CHEK2-220ENST00000454252 MPRIPQ6WCQ1 1025 aa9.92□□□□□ -0.82
CHEK2-220ENST00000454252 TUBGCP6Q96RT7 1819 aa9.91□□□□□ -0.82
CHEK2-220ENST00000454252 FYB1O15117 783 aa9.91□□□□□ -0.82
CHEK2-220ENST00000454252 TONSLQ96HA7 1378 aa9.9□□□□□ -0.82
CHEK2-220ENST00000454252 CYP27B1O15528 508 aa9.9□□□□□ -0.82
CHEK2-220ENST00000454252 RAPGEF4Q8WZA2 1011 aa9.9□□□□□ -0.82
CHEK2-220ENST00000454252 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
CHEK2-220ENST00000454252 GRIN3BO60391 1043 aa9.89□□□□□ -0.83
CHEK2-220ENST00000454252 TATP17735 454 aaPredicted RBP9.89□□□□□ -0.83
CHEK2-220ENST00000454252 IFFO2Q5TF58 517 aa9.89□□□□□ -0.83
CHEK2-220ENST00000454252 EMILIN1Q9Y6C2 1016 aa9.89□□□□□ -0.83
CHEK2-220ENST00000454252 IGSF1Q8N6C5 1336 aa9.88□□□□□ -0.83
CHEK2-220ENST00000454252 COL24A1Q17RW2 1714 aa9.88□□□□□ -0.83
CHEK2-220ENST00000454252 LINC00116Q8NCU8 138 aa9.88□□□□□ -0.83
CHEK2-220ENST00000454252 PIGBQ92521 554 aa9.88□□□□□ -0.83
CHEK2-220ENST00000454252 PUS7Q96PZ0 661 aaKnown RBP9.88□□□□□ -0.83
CHEK2-220ENST00000454252 GPBP1L1Q9HC44 474 aaPredicted RBP9.88□□□□□ -0.83
CHEK2-220ENST00000454252 CD2APQ9Y5K6 639 aa9.88□□□□□ -0.83
CHEK2-220ENST00000454252 ADCY9O60503 1353 aa9.88□□□□□ -0.83
CHEK2-220ENST00000454252 LY75O60449 1722 aa9.87□□□□□ -0.83
CHEK2-220ENST00000454252 PCDH11XQ9BZA7 1347 aa9.87□□□□□ -0.83
CHEK2-220ENST00000454252 PCDH11YQ9BZA8 1340 aa9.87□□□□□ -0.83
CHEK2-220ENST00000454252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.87□□□□□ -0.83
CHEK2-220ENST00000454252 AK7Q96M32 723 aa9.87□□□□□ -0.83
CHEK2-220ENST00000454252 RGPD2P0DJD1 1756 aa9.87□□□□□ -0.83
CHEK2-220ENST00000454252 QSER1Q2KHR3 1735 aa9.87□□□□□ -0.83
CHEK2-220ENST00000454252 CHD4Q14839 1912 aa9.86□□□□□ -0.83
CHEK2-220ENST00000454252 PPM1GO15355 546 aaPredicted RBP9.86□□□□□ -0.83
CHEK2-220ENST00000454252 ITPK1Q13572 414 aa9.86□□□□□ -0.83
CHEK2-220ENST00000454252 SMG6Q86US8 1419 aaKnown RBP9.86□□□□□ -0.83
CHEK2-220ENST00000454252 CARD14Q9BXL6 1004 aa9.86□□□□□ -0.83
CHEK2-220ENST00000454252 INSRP06213 1382 aa9.86□□□□□ -0.83
CHEK2-220ENST00000454252 CGNL1Q0VF96 1302 aa9.85□□□□□ -0.83
CHEK2-220ENST00000454252 ASAP1Q9ULH1 1129 aa9.85□□□□□ -0.83
CHEK2-220ENST00000454252 FLT4P35916 1363 aa9.85□□□□□ -0.83
CHEK2-220ENST00000454252 TOGARAM1Q9Y4F4 1720 aa9.85□□□□□ -0.83
CHEK2-220ENST00000454252 LOC102724428A0A0B4J2F2 783 aa9.84□□□□□ -0.83
CHEK2-220ENST00000454252 HSPA6P17066 643 aa9.84□□□□□ -0.83
CHEK2-220ENST00000454252 SIK1P57059 783 aa9.84□□□□□ -0.83
CHEK2-220ENST00000454252 KAT6BQ8WYB5 2073 aa9.84□□□□□ -0.83
CHEK2-220ENST00000454252 C5P01031 1676 aa9.83□□□□□ -0.84
CHEK2-220ENST00000454252 KIF3CO14782 793 aa9.83□□□□□ -0.84
CHEK2-220ENST00000454252 GNPATO15228 680 aa9.83□□□□□ -0.84
CHEK2-220ENST00000454252 FLAD1Q8NFF5 587 aa9.83□□□□□ -0.84
CHEK2-220ENST00000454252 NSD3Q9BZ95 1437 aa9.82□□□□□ -0.84
CHEK2-220ENST00000454252 C4BP0C0L5 1744 aa9.82□□□□□ -0.84
CHEK2-220ENST00000454252 MMP10P09238 476 aa9.82□□□□□ -0.84
CHEK2-220ENST00000454252 TMF1P82094 1093 aa9.82□□□□□ -0.84
CHEK2-220ENST00000454252 SMARCC1Q92922 1105 aaPredicted RBP9.82□□□□□ -0.84
CHEK2-220ENST00000454252 SLC4A9Q96Q91 983 aa9.82□□□□□ -0.84
CHEK2-220ENST00000454252 EYA1Q99502 592 aa9.82□□□□□ -0.84
CHEK2-220ENST00000454252 PXDNLA1KZ92 1463 aa9.81□□□□□ -0.84
CHEK2-220ENST00000454252 A0A0G2JLW4 131 aa9.81□□□□□ -0.84
CHEK2-220ENST00000454252 SSFA2P28290 1259 aa9.81□□□□□ -0.84
CHEK2-220ENST00000454252 ATP6V1AP38606 617 aa9.81□□□□□ -0.84
CHEK2-220ENST00000454252 NKX1-1Q15270 411 aaPredicted RBP9.81□□□□□ -0.84
CHEK2-220ENST00000454252 ATG3Q9NT62 314 aa9.81□□□□□ -0.84
CHEK2-220ENST00000454252 TMOD3Q9NYL9 352 aa9.81□□□□□ -0.84
CHEK2-220ENST00000454252 NCAPD2Q15021 1401 aa9.81□□□□□ -0.84
CHEK2-220ENST00000454252 PHKG2P15735 406 aa9.8□□□□□ -0.84
CHEK2-220ENST00000454252 TNNT2P45379 298 aaPredicted RBP9.8□□□□□ -0.84
CHEK2-220ENST00000454252 HTRA3P83110 453 aa9.79□□□□□ -0.84
CHEK2-220ENST00000454252 NMRK2Q9NPI5 230 aa9.79□□□□□ -0.84
CHEK2-220ENST00000454252 SPG7Q9UQ90 795 aa9.79□□□□□ -0.84
CHEK2-220ENST00000454252 BCS1LQ9Y276 419 aa9.79□□□□□ -0.84
CHEK2-220ENST00000454252 KDRP35968 1356 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms