RNA–Protein interactions for RNA: ENST00000454226.5

EPB41L1-216, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 3

Gene EPB41L1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-216ENST00000454226 BCL9O00512 1426 aa18.7■□□□□ 0.58
EPB41L1-216ENST00000454226 EIF4A2Q14240 407 aaKnown RBP18.7■□□□□ 0.58
EPB41L1-216ENST00000454226 PARD3Q8TEW0 1356 aa18.69■□□□□ 0.58
EPB41L1-216ENST00000454226 R3HDM1Q15032 1099 aaKnown RBP18.69■□□□□ 0.58
EPB41L1-216ENST00000454226 SYTL4Q96C24 671 aaPredicted RBP18.69■□□□□ 0.58
EPB41L1-216ENST00000454226 EYA1Q99502 592 aa18.69■□□□□ 0.58
EPB41L1-216ENST00000454226 NHSQ6T4R5 1651 aa18.68■□□□□ 0.58
EPB41L1-216ENST00000454226 RREB1Q92766 1687 aa18.68■□□□□ 0.58
EPB41L1-216ENST00000454226 SHANK3Q9BYB0 1731 aa18.68■□□□□ 0.58
EPB41L1-216ENST00000454226 NUP188Q5SRE5 1749 aa18.67■□□□□ 0.58
EPB41L1-216ENST00000454226 PER1O15534 1290 aaPredicted RBP18.67■□□□□ 0.58
EPB41L1-216ENST00000454226 PLSCR1O15162 318 aa18.65■□□□□ 0.58
EPB41L1-216ENST00000454226 DOT1LQ8TEK3 1739 aa18.65■□□□□ 0.58
EPB41L1-216ENST00000454226 BTAF1O14981 1849 aa18.65■□□□□ 0.58
EPB41L1-216ENST00000454226 NBPF14Q5TI25 921 aa18.64■□□□□ 0.57
EPB41L1-216ENST00000454226 PCDH11XQ9BZA7 1347 aa18.64■□□□□ 0.57
EPB41L1-216ENST00000454226 PCDH11YQ9BZA8 1340 aa18.64■□□□□ 0.57
EPB41L1-216ENST00000454226 PRIM1P49642 420 aaKnown RBP18.63■□□□□ 0.57
EPB41L1-216ENST00000454226 MTHFSP49914 203 aa18.62■□□□□ 0.57
EPB41L1-216ENST00000454226 TXNRD1Q16881 649 aa18.62■□□□□ 0.57
EPB41L1-216ENST00000454226 RGPD3A6NKT7 1758 aaPredicted RBP18.62■□□□□ 0.57
EPB41L1-216ENST00000454226 RGPD4Q7Z3J3 1758 aa18.62■□□□□ 0.57
EPB41L1-216ENST00000454226 NCAPD2Q15021 1401 aa18.61■□□□□ 0.57
EPB41L1-216ENST00000454226 IGSF1Q8N6C5 1336 aa18.6■□□□□ 0.57
EPB41L1-216ENST00000454226 CYP27B1O15528 508 aa18.6■□□□□ 0.57
EPB41L1-216ENST00000454226 PROM2Q8N271 834 aa18.6■□□□□ 0.57
EPB41L1-216ENST00000454226 SPG7Q9UQ90 795 aa18.6■□□□□ 0.57
EPB41L1-216ENST00000454226 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
EPB41L1-216ENST00000454226 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
EPB41L1-216ENST00000454226 ANO8Q9HCE9 1232 aaPredicted RBP18.59■□□□□ 0.57
EPB41L1-216ENST00000454226 NPC1L1Q9UHC9 1359 aa18.56■□□□□ 0.56
EPB41L1-216ENST00000454226 IL13P35225 146 aa18.56■□□□□ 0.56
EPB41L1-216ENST00000454226 SULT6B1Q6IMI4 303 aa18.56■□□□□ 0.56
EPB41L1-216ENST00000454226 MPRIPQ6WCQ1 1025 aa18.56■□□□□ 0.56
EPB41L1-216ENST00000454226 KCNQ4P56696 695 aa18.55■□□□□ 0.56
EPB41L1-216ENST00000454226 STK32BQ9NY57 414 aa18.55■□□□□ 0.56
EPB41L1-216ENST00000454226 TOGARAM1Q9Y4F4 1720 aa18.54■□□□□ 0.56
EPB41L1-216ENST00000454226 DIAPH1O60610 1272 aaKnown RBP18.53■□□□□ 0.56
EPB41L1-216ENST00000454226 HMOX1P09601 288 aa18.53■□□□□ 0.56
EPB41L1-216ENST00000454226 IFNL2Q8IZJ0 200 aa18.53■□□□□ 0.56
EPB41L1-216ENST00000454226 PHKG2P15735 406 aa18.52■□□□□ 0.56
EPB41L1-216ENST00000454226 PLEKHO1Q53GL0 409 aaPredicted RBP18.52■□□□□ 0.56
EPB41L1-216ENST00000454226 ZNF530Q6P9A1 599 aaPredicted RBP18.52■□□□□ 0.56
EPB41L1-216ENST00000454226 LRRC4BQ9NT99 713 aa18.52■□□□□ 0.56
EPB41L1-216ENST00000454226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.52■□□□□ 0.566e-7■■□□□ 14.3
EPB41L1-216ENST00000454226 ITGB4P16144 1822 aa18.51■□□□□ 0.55
EPB41L1-216ENST00000454226 U2SURPO15042 1029 aaKnown RBP18.5■□□□□ 0.55
EPB41L1-216ENST00000454226 SLC15A2Q16348 729 aa18.5■□□□□ 0.55
EPB41L1-216ENST00000454226 CCNL1Q9UK58 526 aaPredicted RBP18.5■□□□□ 0.55
EPB41L1-216ENST00000454226 PDGFDQ9GZP0 370 aaPredicted RBP18.49■□□□□ 0.55
EPB41L1-216ENST00000454226 LRP5O75197 1615 aa18.49■□□□□ 0.55
EPB41L1-216ENST00000454226 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
EPB41L1-216ENST00000454226 ZNF827Q17R98 1081 aa18.48■□□□□ 0.55
EPB41L1-216ENST00000454226 AMOTQ4VCS5 1084 aa18.48■□□□□ 0.55
EPB41L1-216ENST00000454226 C1orf141Q5JVX7 400 aa18.48■□□□□ 0.55
EPB41L1-216ENST00000454226 SLC27A3Q5K4L6 730 aa18.48■□□□□ 0.55
EPB41L1-216ENST00000454226 TMOD3Q9NYL9 352 aa18.48■□□□□ 0.55
EPB41L1-216ENST00000454226 KDRP35968 1356 aa18.47■□□□□ 0.55
EPB41L1-216ENST00000454226 PALLDQ8WX93 1383 aa18.47■□□□□ 0.55
EPB41L1-216ENST00000454226 DDX10Q13206 875 aaKnown RBP18.47■□□□□ 0.55
EPB41L1-216ENST00000454226 PIGBQ92521 554 aa18.47■□□□□ 0.55
EPB41L1-216ENST00000454226 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
EPB41L1-216ENST00000454226 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
EPB41L1-216ENST00000454226 LY75O60449 1722 aa18.46■□□□□ 0.55
EPB41L1-216ENST00000454226 PAPPAQ13219 1627 aa18.46■□□□□ 0.55
EPB41L1-216ENST00000454226 ZBTB7AO95365 584 aa18.46■□□□□ 0.55
EPB41L1-216ENST00000454226 PPP2R1AP30153 589 aa18.46■□□□□ 0.55
EPB41L1-216ENST00000454226 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
EPB41L1-216ENST00000454226 SRCAPQ6ZRS2 3230 aa18.44■□□□□ 0.54
EPB41L1-216ENST00000454226 SPON1Q9HCB6 807 aa18.44■□□□□ 0.54
EPB41L1-216ENST00000454226 PLEKHG2Q9H7P9 1386 aa18.43■□□□□ 0.54
EPB41L1-216ENST00000454226 CASZ1Q86V15 1759 aa18.43■□□□□ 0.54
EPB41L1-216ENST00000454226 KDM6AO15550 1401 aaPredicted RBP18.43■□□□□ 0.54
EPB41L1-216ENST00000454226 ZEB1P37275 1124 aaPredicted RBP18.43■□□□□ 0.54
EPB41L1-216ENST00000454226 SMARCC1Q92922 1105 aaPredicted RBP18.43■□□□□ 0.54
EPB41L1-216ENST00000454226 DCAF5Q96JK2 942 aa18.43■□□□□ 0.54
EPB41L1-216ENST00000454226 TFCP2L1Q9NZI6 479 aa18.43■□□□□ 0.54
EPB41L1-216ENST00000454226 ATF5Q9Y2D1 282 aaPredicted RBP18.43■□□□□ 0.54
EPB41L1-216ENST00000454226 CABP4P57796 275 aa18.42■□□□□ 0.54
EPB41L1-216ENST00000454226 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
EPB41L1-216ENST00000454226 ASAP1Q9ULH1 1129 aa18.42■□□□□ 0.54
EPB41L1-216ENST00000454226 AKT1S1Q96B36 256 aa18.41■□□□□ 0.54
EPB41L1-216ENST00000454226 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
EPB41L1-216ENST00000454226 C5P01031 1676 aa18.39■□□□□ 0.53
EPB41L1-216ENST00000454226 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
EPB41L1-216ENST00000454226 MSH5O43196 834 aa18.39■□□□□ 0.53
EPB41L1-216ENST00000454226 MTHFSDQ2M296 383 aaKnown RBP18.39■□□□□ 0.53
EPB41L1-216ENST00000454226 TUBGCP6Q96RT7 1819 aa18.39■□□□□ 0.53
EPB41L1-216ENST00000454226 LOC102724428A0A0B4J2F2 783 aa18.38■□□□□ 0.53
EPB41L1-216ENST00000454226 U2AF1L5P0DN76 240 aaPredicted RBP18.38■□□□□ 0.53
EPB41L1-216ENST00000454226 SIK1P57059 783 aa18.38■□□□□ 0.53
EPB41L1-216ENST00000454226 U2AF1Q01081 240 aaKnown RBP eCLIP18.38■□□□□ 0.53
EPB41L1-216ENST00000454226 AKAP4Q5JQC9 854 aa18.38■□□□□ 0.53
EPB41L1-216ENST00000454226 RBM42Q9BTD8 480 aaKnown RBP18.38■□□□□ 0.53
EPB41L1-216ENST00000454226 ATG3Q9NT62 314 aa18.38■□□□□ 0.53
EPB41L1-216ENST00000454226 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
EPB41L1-216ENST00000454226 PNPLA7Q6ZV29 1317 aa18.37■□□□□ 0.53
EPB41L1-216ENST00000454226 ATP6V1AP38606 617 aa18.36■□□□□ 0.53
EPB41L1-216ENST00000454226 TAF1LQ8IZX4 1826 aa18.36■□□□□ 0.53
EPB41L1-216ENST00000454226 NFATC2IPQ8NCF5 419 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms