RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 FYB1O15117 783 aa33.17■■■□□ 2.9
LYSMD2-202ENST00000454181 KLHL34Q8N239 644 aa33.17■■■□□ 2.9
LYSMD2-202ENST00000454181 RAPGEF4Q8WZA2 1011 aa33.17■■■□□ 2.9
LYSMD2-202ENST00000454181 CDCA8Q53HL2 280 aa33.16■■■□□ 2.9
LYSMD2-202ENST00000454181 SMG6Q86US8 1419 aaKnown RBP33.16■■■□□ 2.9
LYSMD2-202ENST00000454181 KCNQ4P56696 695 aa33.15■■■□□ 2.9
LYSMD2-202ENST00000454181 NBPF6Q5VWK0 638 aa33.15■■■□□ 2.9
LYSMD2-202ENST00000454181 NBPF4Q96M43 638 aa33.15■■■□□ 2.9
LYSMD2-202ENST00000454181 USP47Q96K76 1375 aa33.14■■■□□ 2.9
LYSMD2-202ENST00000454181 MAP3K5Q99683 1374 aa33.14■■■□□ 2.9
LYSMD2-202ENST00000454181 CGNL1Q0VF96 1302 aa33.14■■■□□ 2.9
LYSMD2-202ENST00000454181 CCNL1Q9UK58 526 aaPredicted RBP33.13■■■□□ 2.89
LYSMD2-202ENST00000454181 PNPLA7Q6ZV29 1317 aa33.12■■■□□ 2.89
LYSMD2-202ENST00000454181 GPR162Q16538 588 aa33.12■■■□□ 2.89
LYSMD2-202ENST00000454181 USHBP1Q8N6Y0 703 aa33.12■■■□□ 2.89
LYSMD2-202ENST00000454181 ZNF784Q8NCA9 323 aaPredicted RBP33.12■■■□□ 2.89
LYSMD2-202ENST00000454181 MEGF6O75095 1541 aa33.12■■■□□ 2.89
LYSMD2-202ENST00000454181 TATP17735 454 aaPredicted RBP33.11■■■□□ 2.89
LYSMD2-202ENST00000454181 MSH5O43196 834 aa33.08■■■□□ 2.89
LYSMD2-202ENST00000454181 DOT1LQ8TEK3 1739 aa33.07■■■□□ 2.88
LYSMD2-202ENST00000454181 NSD2O96028 1365 aa33.07■■■□□ 2.88
LYSMD2-202ENST00000454181 RGPD2P0DJD1 1756 aa33.06■■■□□ 2.88
LYSMD2-202ENST00000454181 HMGB2P26583 209 aaKnown RBP33.05■■■□□ 2.88
LYSMD2-202ENST00000454181 HSP90AB2PQ58FF8 381 aa33.05■■■□□ 2.88
LYSMD2-202ENST00000454181 PELP1Q8IZL8 1130 aaKnown RBP33.05■■■□□ 2.88
LYSMD2-202ENST00000454181 TRIM26Q12899 539 aaPredicted RBP33.04■■■□□ 2.88
LYSMD2-202ENST00000454181 INSRP06213 1382 aa33.04■■■□□ 2.88
LYSMD2-202ENST00000454181 FLT4P35916 1363 aa33.03■■■□□ 2.88
LYSMD2-202ENST00000454181 PCDH11XQ9BZA7 1347 aa33.02■■■□□ 2.88
LYSMD2-202ENST00000454181 PCDH11YQ9BZA8 1340 aa33.02■■■□□ 2.88
LYSMD2-202ENST00000454181 QSER1Q2KHR3 1735 aa33.02■■■□□ 2.88
LYSMD2-202ENST00000454181 KIF24Q5T7B8 1368 aa33.01■■■□□ 2.88
LYSMD2-202ENST00000454181 LY75O60449 1722 aa32.99■■■□□ 2.87
LYSMD2-202ENST00000454181 SHANK3Q9BYB0 1731 aa32.99■■■□□ 2.87
LYSMD2-202ENST00000454181 MPRIPQ6WCQ1 1025 aa32.97■■■□□ 2.87
LYSMD2-202ENST00000454181 UTRNP46939 3433 aa32.96■■■□□ 2.87
LYSMD2-202ENST00000454181 PPM1GO15355 546 aaPredicted RBP32.96■■■□□ 2.87
LYSMD2-202ENST00000454181 COL23A1Q86Y22 540 aaPredicted RBP32.96■■■□□ 2.87
LYSMD2-202ENST00000454181 CHD4Q14839 1912 aa32.96■■■□□ 2.87
LYSMD2-202ENST00000454181 CARD14Q9BXL6 1004 aa32.93■■■□□ 2.86
LYSMD2-202ENST00000454181 FLAD1Q8NFF5 587 aa32.92■■■□□ 2.86
LYSMD2-202ENST00000454181 NLGN2Q8NFZ4 835 aa32.92■■■□□ 2.86
LYSMD2-202ENST00000454181 EMILIN1Q9Y6C2 1016 aa32.92■■■□□ 2.86
LYSMD2-202ENST00000454181 KIF20BQ96Q89 1820 aa32.92■■■□□ 2.86
LYSMD2-202ENST00000454181 NSD3Q9BZ95 1437 aa32.92■■■□□ 2.86
LYSMD2-202ENST00000454181 SMARCC1Q92922 1105 aaPredicted RBP32.91■■■□□ 2.86
LYSMD2-202ENST00000454181 PALLDQ8WX93 1383 aa32.91■■■□□ 2.86
LYSMD2-202ENST00000454181 TUBGCP6Q96RT7 1819 aa32.91■■■□□ 2.86
LYSMD2-202ENST00000454181 CYP27B1O15528 508 aa32.9■■■□□ 2.86
LYSMD2-202ENST00000454181 MSL1Q68DK7 614 aa32.9■■■□□ 2.86
LYSMD2-202ENST00000454181 SPG7Q9UQ90 795 aa32.88■■■□□ 2.85
LYSMD2-202ENST00000454181 COL24A1Q17RW2 1714 aa32.88■■■□□ 2.85
LYSMD2-202ENST00000454181 GRIN3BO60391 1043 aa32.86■■■□□ 2.85
LYSMD2-202ENST00000454181 TIMELESSQ9UNS1 1208 aa32.86■■■□□ 2.85
LYSMD2-202ENST00000454181 AK7Q96M32 723 aa32.85■■■□□ 2.85
LYSMD2-202ENST00000454181 C1QTNF8P60827 252 aa32.83■■■□□ 2.85
LYSMD2-202ENST00000454181 POLR3GLQ9BT43 218 aa32.83■■■□□ 2.85
LYSMD2-202ENST00000454181 WASHC2AQ641Q2 1341 aa32.82■■■□□ 2.84
LYSMD2-202ENST00000454181 SENP3-EIF4A1A0A087X0R7 540 aa32.8■■■□□ 2.84
LYSMD2-202ENST00000454181 PIGBQ92521 554 aa32.8■■■□□ 2.84
LYSMD2-202ENST00000454181 C5P01031 1676 aa32.8■■■□□ 2.84
LYSMD2-202ENST00000454181 NKX1-1Q15270 411 aaPredicted RBP32.79■■■□□ 2.84
LYSMD2-202ENST00000454181 CD2APQ9Y5K6 639 aa32.79■■■□□ 2.84
LYSMD2-202ENST00000454181 GIGYF1O75420 1035 aaPredicted RBP32.78■■■□□ 2.84
LYSMD2-202ENST00000454181 EYA1Q99502 592 aa32.78■■■□□ 2.84
LYSMD2-202ENST00000454181 YBX3P16989 372 aaKnown RBP eCLIP32.77■■■□□ 2.84
LYSMD2-202ENST00000454181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.77■■■□□ 2.84
LYSMD2-202ENST00000454181 TMOD3Q9NYL9 352 aa32.77■■■□□ 2.84
LYSMD2-202ENST00000454181 PHF14O94880 888 aa32.76■■■□□ 2.83
LYSMD2-202ENST00000454181 POLKQ9UBT6 870 aa32.74■■■□□ 2.83
LYSMD2-202ENST00000454181 LOC102724428A0A0B4J2F2 783 aa32.73■■■□□ 2.83
LYSMD2-202ENST00000454181 SIK1P57059 783 aa32.73■■■□□ 2.83
LYSMD2-202ENST00000454181 IFNL2Q8IZJ0 200 aa32.73■■■□□ 2.83
LYSMD2-202ENST00000454181 NCAPD2Q15021 1401 aa32.73■■■□□ 2.83
LYSMD2-202ENST00000454181 PKD1L3Q7Z443 1732 aa32.72■■■□□ 2.83
LYSMD2-202ENST00000454181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.72■■■□□ 2.83
LYSMD2-202ENST00000454181 TNNT2P45379 298 aaPredicted RBP32.72■■■□□ 2.83
LYSMD2-202ENST00000454181 PCGF6Q9BYE7 350 aa32.7■■■□□ 2.83
LYSMD2-202ENST00000454181 C4BP0C0L5 1744 aa32.7■■■□□ 2.83
LYSMD2-202ENST00000454181 TOGARAM1Q9Y4F4 1720 aa32.7■■■□□ 2.83
LYSMD2-202ENST00000454181 ITGB4P16144 1822 aa32.7■■■□□ 2.82
LYSMD2-202ENST00000454181 PHKG2P15735 406 aa32.69■■■□□ 2.82
LYSMD2-202ENST00000454181 TAF1LQ8IZX4 1826 aa32.69■■■□□ 2.82
LYSMD2-202ENST00000454181 SSFA2P28290 1259 aa32.68■■■□□ 2.82
LYSMD2-202ENST00000454181 CLSPNQ9HAW4 1339 aa32.68■■■□□ 2.82
LYSMD2-202ENST00000454181 ATP6V1AP38606 617 aa32.67■■■□□ 2.82
LYSMD2-202ENST00000454181 ASAP1Q9ULH1 1129 aa32.67■■■□□ 2.82
LYSMD2-202ENST00000454181 EIF4A2Q14240 407 aaKnown RBP32.66■■■□□ 2.82
LYSMD2-202ENST00000454181 LINC00116Q8NCU8 138 aa32.66■■■□□ 2.82
LYSMD2-202ENST00000454181 GOLGB1Q14789 3259 aaKnown RBP32.66■■■□□ 2.82
LYSMD2-202ENST00000454181 MAP2P11137 1827 aaKnown RBP32.65■■■□□ 2.82
LYSMD2-202ENST00000454181 GNPATO15228 680 aa32.65■■■□□ 2.82
LYSMD2-202ENST00000454181 SMIM5Q71RC9 77 aa32.65■■■□□ 2.82
LYSMD2-202ENST00000454181 AMIGO3Q86WK7 504 aa32.65■■■□□ 2.82
LYSMD2-202ENST00000454181 ANKRD26Q9UPS8 1709 aa32.65■■■□□ 2.82
LYSMD2-202ENST00000454181 EIF4G2P78344 907 aaKnown RBP eCLIP32.61■■■□□ 2.81
LYSMD2-202ENST00000454181 ITPK1Q13572 414 aa32.6■■■□□ 2.81
LYSMD2-202ENST00000454181 ATG3Q9NT62 314 aa32.6■■■□□ 2.81
LYSMD2-202ENST00000454181 HSP90AB1P08238 724 aaKnown RBP32.59■■■□□ 2.81
LYSMD2-202ENST00000454181 IGSF1Q8N6C5 1336 aa32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms