RNA–Protein interactions for RNA: ENST00000454001.1

RPSAP54-201, Transcript of ribosomal protein SA pseudogene 54, humanhuman

BASIC

Gene RPSAP54, Length 886 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP54-201ENST00000454001 ZNF827Q17R98 1081 aa11.48□□□□□ -0.57
RPSAP54-201ENST00000454001 MEGF6O75095 1541 aa11.47□□□□□ -0.57
RPSAP54-201ENST00000454001 MAP3K19Q56UN5 1328 aa11.47□□□□□ -0.57
RPSAP54-201ENST00000454001 SYTL4Q96C24 671 aaPredicted RBP11.47□□□□□ -0.57
RPSAP54-201ENST00000454001 COG3Q96JB2 828 aa11.47□□□□□ -0.57
RPSAP54-201ENST00000454001 TESK2Q96S53 571 aa11.47□□□□□ -0.57
RPSAP54-201ENST00000454001 FHDC1Q9C0D6 1143 aaPredicted RBP11.47□□□□□ -0.57
RPSAP54-201ENST00000454001 AMPHP49418 695 aa11.46□□□□□ -0.57
RPSAP54-201ENST00000454001 KCNQ4P56696 695 aa11.46□□□□□ -0.57
RPSAP54-201ENST00000454001 IP6K1Q92551 441 aa11.46□□□□□ -0.57
RPSAP54-201ENST00000454001 HOXC9P31274 260 aa11.45□□□□□ -0.58
RPSAP54-201ENST00000454001 RRS1Q15050 365 aaKnown RBP11.45□□□□□ -0.58
RPSAP54-201ENST00000454001 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
RPSAP54-201ENST00000454001 USHBP1Q8N6Y0 703 aa11.45□□□□□ -0.58
RPSAP54-201ENST00000454001 MTFR1LQ9H019 292 aa11.45□□□□□ -0.58
RPSAP54-201ENST00000454001 LRRC4BQ9NT99 713 aa11.45□□□□□ -0.58
RPSAP54-201ENST00000454001 LY75O60449 1722 aa11.45□□□□□ -0.58
RPSAP54-201ENST00000454001 ANKRD36BQ8N2N9 1353 aa11.44□□□□□ -0.58
RPSAP54-201ENST00000454001 QSER1Q2KHR3 1735 aa11.44□□□□□ -0.58
RPSAP54-201ENST00000454001 PRKRIP1Q9H875 184 aaPredicted RBP11.44□□□□□ -0.58
RPSAP54-201ENST00000454001 GGNBP2Q9H3C7 697 aa11.43□□□□□ -0.58
RPSAP54-201ENST00000454001 CHD4Q14839 1912 aa11.43□□□□□ -0.58
RPSAP54-201ENST00000454001 PRIM1P49642 420 aaKnown RBP11.42□□□□□ -0.58
RPSAP54-201ENST00000454001 ARXQ96QS3 562 aa11.42□□□□□ -0.58
RPSAP54-201ENST00000454001 SGIP1Q9BQI5 828 aa11.42□□□□□ -0.58
RPSAP54-201ENST00000454001 SYT17Q9BSW7 474 aa11.42□□□□□ -0.58
RPSAP54-201ENST00000454001 RTL1A6NKG5 1358 aa11.41□□□□□ -0.58
RPSAP54-201ENST00000454001 NSD2O96028 1365 aa11.41□□□□□ -0.58
RPSAP54-201ENST00000454001 PUS7Q96PZ0 661 aaKnown RBP11.41□□□□□ -0.58
RPSAP54-201ENST00000454001 SMG6Q86US8 1419 aaKnown RBP11.41□□□□□ -0.58
RPSAP54-201ENST00000454001 TOGARAM1Q9Y4F4 1720 aa11.4□□□□□ -0.58
RPSAP54-201ENST00000454001 C5P01031 1676 aa11.4□□□□□ -0.58
RPSAP54-201ENST00000454001 TMF1P82094 1093 aa11.4□□□□□ -0.58
RPSAP54-201ENST00000454001 NBPF6Q5VWK0 638 aa11.4□□□□□ -0.58
RPSAP54-201ENST00000454001 PELP1Q8IZL8 1130 aaKnown RBP11.4□□□□□ -0.58
RPSAP54-201ENST00000454001 ZCRB1Q8TBF4 217 aaKnown RBP11.4□□□□□ -0.58
RPSAP54-201ENST00000454001 NBPF4Q96M43 638 aa11.4□□□□□ -0.58
RPSAP54-201ENST00000454001 TFCP2L1Q9NZI6 479 aa11.4□□□□□ -0.58
RPSAP54-201ENST00000454001 PNPLA7Q6ZV29 1317 aa11.39□□□□□ -0.59
RPSAP54-201ENST00000454001 MSH5O43196 834 aa11.39□□□□□ -0.59
RPSAP54-201ENST00000454001 KCNA4P22459 653 aa11.39□□□□□ -0.59
RPSAP54-201ENST00000454001 AKT1S1Q96B36 256 aa11.39□□□□□ -0.59
RPSAP54-201ENST00000454001 COL24A1Q17RW2 1714 aa11.38□□□□□ -0.59
RPSAP54-201ENST00000454001 NSD3Q9BZ95 1437 aa11.38□□□□□ -0.59
RPSAP54-201ENST00000454001 ITGB4P16144 1822 aa11.38□□□□□ -0.59
RPSAP54-201ENST00000454001 FYB1O15117 783 aa11.38□□□□□ -0.59
RPSAP54-201ENST00000454001 SLC27A3Q5K4L6 730 aa11.38□□□□□ -0.59
RPSAP54-201ENST00000454001 POLR3GLQ9BT43 218 aa11.38□□□□□ -0.59
RPSAP54-201ENST00000454001 CCNL1Q9UK58 526 aaPredicted RBP11.38□□□□□ -0.59
RPSAP54-201ENST00000454001 TAF1LQ8IZX4 1826 aa11.37□□□□□ -0.59
RPSAP54-201ENST00000454001 POLD1P28340 1107 aa11.37□□□□□ -0.59
RPSAP54-201ENST00000454001 CCDC184Q52MB2 194 aa11.37□□□□□ -0.59
RPSAP54-201ENST00000454001 HSP90AB2PQ58FF8 381 aa11.37□□□□□ -0.59
RPSAP54-201ENST00000454001 ZNF784Q8NCA9 323 aaPredicted RBP11.37□□□□□ -0.59
RPSAP54-201ENST00000454001 RAPGEF4Q8WZA2 1011 aa11.37□□□□□ -0.59
RPSAP54-201ENST00000454001 PKD1L3Q7Z443 1732 aa11.37□□□□□ -0.59
RPSAP54-201ENST00000454001 ANKRD26Q9UPS8 1709 aa11.36□□□□□ -0.59
RPSAP54-201ENST00000454001 PPM1GO15355 546 aaPredicted RBP11.36□□□□□ -0.59
RPSAP54-201ENST00000454001 GPR162Q16538 588 aa11.36□□□□□ -0.59
RPSAP54-201ENST00000454001 MSL1Q68DK7 614 aa11.36□□□□□ -0.59
RPSAP54-201ENST00000454001 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
RPSAP54-201ENST00000454001 FLT4P35916 1363 aa11.36□□□□□ -0.59
RPSAP54-201ENST00000454001 TATP17735 454 aaPredicted RBP11.35□□□□□ -0.59
RPSAP54-201ENST00000454001 NLGN2Q8NFZ4 835 aa11.35□□□□□ -0.59
RPSAP54-201ENST00000454001 MAP3K5Q99683 1374 aa11.35□□□□□ -0.59
RPSAP54-201ENST00000454001 MAP2P11137 1827 aaKnown RBP11.35□□□□□ -0.59
RPSAP54-201ENST00000454001 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
RPSAP54-201ENST00000454001 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
RPSAP54-201ENST00000454001 INSRP06213 1382 aa11.34□□□□□ -0.59
RPSAP54-201ENST00000454001 SLC24A1O60721 1099 aa11.34□□□□□ -0.59
RPSAP54-201ENST00000454001 MPRIPQ6WCQ1 1025 aa11.34□□□□□ -0.59
RPSAP54-201ENST00000454001 MRS2Q9HD23 443 aa11.34□□□□□ -0.59
RPSAP54-201ENST00000454001 PALLDQ8WX93 1383 aa11.33□□□□□ -0.6
RPSAP54-201ENST00000454001 C4BP0C0L5 1744 aa11.33□□□□□ -0.6
RPSAP54-201ENST00000454001 CARD14Q9BXL6 1004 aa11.33□□□□□ -0.6
RPSAP54-201ENST00000454001 CDCA8Q53HL2 280 aa11.32□□□□□ -0.6
RPSAP54-201ENST00000454001 COL23A1Q86Y22 540 aaPredicted RBP11.32□□□□□ -0.6
RPSAP54-201ENST00000454001 SLC16A10Q8TF71 515 aa11.32□□□□□ -0.6
RPSAP54-201ENST00000454001 CGNL1Q0VF96 1302 aa11.32□□□□□ -0.6
RPSAP54-201ENST00000454001 UBR3Q6ZT12 1888 aa11.32□□□□□ -0.6
RPSAP54-201ENST00000454001 CYP27B1O15528 508 aa11.31□□□□□ -0.6
RPSAP54-201ENST00000454001 TNNT2P45379 298 aaPredicted RBP11.31□□□□□ -0.6
RPSAP54-201ENST00000454001 HNRNPUQ00839 825 aaKnown RBP eCLIP11.31□□□□□ -0.6
RPSAP54-201ENST00000454001 SMIM5Q71RC9 77 aa11.31□□□□□ -0.6
RPSAP54-201ENST00000454001 PHF14O94880 888 aa11.3□□□□□ -0.6
RPSAP54-201ENST00000454001 KIF24Q5T7B8 1368 aa11.29□□□□□ -0.6
RPSAP54-201ENST00000454001 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
RPSAP54-201ENST00000454001 RALBP1Q15311 655 aa11.29□□□□□ -0.6
RPSAP54-201ENST00000454001 AMIGO3Q86WK7 504 aa11.29□□□□□ -0.6
RPSAP54-201ENST00000454001 WWC3Q9ULE0 1092 aa11.29□□□□□ -0.6
RPSAP54-201ENST00000454001 SUPT16HQ9Y5B9 1047 aaKnown RBP11.29□□□□□ -0.6
RPSAP54-201ENST00000454001 CEP350Q5VT06 3117 aa11.29□□□□□ -0.6
RPSAP54-201ENST00000454001 SENP3-EIF4A1A0A087X0R7 540 aa11.28□□□□□ -0.6
RPSAP54-201ENST00000454001 YBX3P16989 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPSAP54-201ENST00000454001 FAM9BQ8IZU0 186 aa11.28□□□□□ -0.6
RPSAP54-201ENST00000454001 AK7Q96M32 723 aa11.28□□□□□ -0.6
RPSAP54-201ENST00000454001 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
RPSAP54-201ENST00000454001 NCAPD2Q15021 1401 aa11.27□□□□□ -0.6
RPSAP54-201ENST00000454001 PIAS4Q8N2W9 510 aaPredicted RBP11.27□□□□□ -0.61
RPSAP54-201ENST00000454001 PIGBQ92521 554 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms