RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 FAM208AQ9UK61 1670 aaKnown RBP13.1□□□□□ -0.31
CDC42EP3-203ENST00000453555 BAG6P46379 1132 aa13.1□□□□□ -0.31
CDC42EP3-203ENST00000453555 RRS1Q15050 365 aaKnown RBP13.1□□□□□ -0.31
CDC42EP3-203ENST00000453555 IP6K1Q92551 441 aa13.1□□□□□ -0.31
CDC42EP3-203ENST00000453555 MAP2P11137 1827 aaKnown RBP13.1□□□□□ -0.31
CDC42EP3-203ENST00000453555 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
CDC42EP3-203ENST00000453555 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
CDC42EP3-203ENST00000453555 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
CDC42EP3-203ENST00000453555 AMPHP49418 695 aa13.09□□□□□ -0.31
CDC42EP3-203ENST00000453555 ANKRD26Q9UPS8 1709 aa13.08□□□□□ -0.32
CDC42EP3-203ENST00000453555 C11orf95C9JLR9 678 aaPredicted RBP13.08□□□□□ -0.32
CDC42EP3-203ENST00000453555 HOXC9P31274 260 aa13.08□□□□□ -0.32
CDC42EP3-203ENST00000453555 EN1Q05925 392 aaPredicted RBP13.08□□□□□ -0.32
CDC42EP3-203ENST00000453555 DISP2A7MBM2 1401 aa13.07□□□□□ -0.32
CDC42EP3-203ENST00000453555 CDCA7Q9BWT1 371 aaPredicted RBP13.07□□□□□ -0.32
CDC42EP3-203ENST00000453555 OVOS2A0A0G2JMS6 1433 aa13.06□□□□□ -0.32
CDC42EP3-203ENST00000453555 EXOC5O00471 708 aa13.06□□□□□ -0.32
CDC42EP3-203ENST00000453555 APBA3O96018 575 aa13.06□□□□□ -0.32
CDC42EP3-203ENST00000453555 MARCH10Q8NA82 808 aaPredicted RBP13.06□□□□□ -0.32
CDC42EP3-203ENST00000453555 KAT6BQ8WYB5 2073 aa13.05□□□□□ -0.32
CDC42EP3-203ENST00000453555 IL2RBP14784 551 aa13.05□□□□□ -0.32
CDC42EP3-203ENST00000453555 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
CDC42EP3-203ENST00000453555 EZH2Q15910 746 aaKnown RBP13.05□□□□□ -0.32
CDC42EP3-203ENST00000453555 PANK3Q9H999 370 aa13.05□□□□□ -0.32
CDC42EP3-203ENST00000453555 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
CDC42EP3-203ENST00000453555 RTL1A6NKG5 1358 aa13.04□□□□□ -0.32
CDC42EP3-203ENST00000453555 TNS2Q63HR2 1409 aa13.04□□□□□ -0.32
CDC42EP3-203ENST00000453555 RREB1Q92766 1687 aa13.03□□□□□ -0.32
CDC42EP3-203ENST00000453555 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
CDC42EP3-203ENST00000453555 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.33
CDC42EP3-203ENST00000453555 TNNT2P45379 298 aaPredicted RBP13.02□□□□□ -0.33
CDC42EP3-203ENST00000453555 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
CDC42EP3-203ENST00000453555 CAMKK2Q96RR4 588 aa13.02□□□□□ -0.33
CDC42EP3-203ENST00000453555 NUP188Q5SRE5 1749 aa13.02□□□□□ -0.33
CDC42EP3-203ENST00000453555 NBPF6Q5VWK0 638 aa13.01□□□□□ -0.33
CDC42EP3-203ENST00000453555 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
CDC42EP3-203ENST00000453555 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
CDC42EP3-203ENST00000453555 NBPF4Q96M43 638 aa13.01□□□□□ -0.33
CDC42EP3-203ENST00000453555 KIF7Q2M1P5 1343 aa13.01□□□□□ -0.33
CDC42EP3-203ENST00000453555 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
CDC42EP3-203ENST00000453555 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
CDC42EP3-203ENST00000453555 INSRP06213 1382 aa13□□□□□ -0.33
CDC42EP3-203ENST00000453555 FLT4P35916 1363 aa13□□□□□ -0.33
CDC42EP3-203ENST00000453555 PSDA5PKW4 1024 aaPredicted RBP13□□□□□ -0.33
CDC42EP3-203ENST00000453555 GABBR2O75899 941 aa13□□□□□ -0.33
CDC42EP3-203ENST00000453555 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
CDC42EP3-203ENST00000453555 DDX54Q8TDD1 881 aaKnown RBP12.99□□□□□ -0.33
CDC42EP3-203ENST00000453555 ACSBG1Q96GR2 724 aa12.99□□□□□ -0.33
CDC42EP3-203ENST00000453555 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
CDC42EP3-203ENST00000453555 RGPD3A6NKT7 1758 aaPredicted RBP12.99□□□□□ -0.33
CDC42EP3-203ENST00000453555 RGPD4Q7Z3J3 1758 aa12.99□□□□□ -0.33
CDC42EP3-203ENST00000453555 KIF24Q5T7B8 1368 aa12.98□□□□□ -0.33
CDC42EP3-203ENST00000453555 BTAF1O14981 1849 aa12.98□□□□□ -0.33
CDC42EP3-203ENST00000453555 MEGF6O75095 1541 aa12.98□□□□□ -0.33
CDC42EP3-203ENST00000453555 BCL9O00512 1426 aa12.97□□□□□ -0.33
CDC42EP3-203ENST00000453555 KCNQ2O43526 872 aa12.97□□□□□ -0.33
CDC42EP3-203ENST00000453555 R3HDM1Q15032 1099 aaKnown RBP12.97□□□□□ -0.33
CDC42EP3-203ENST00000453555 POLKQ9UBT6 870 aa12.97□□□□□ -0.33
CDC42EP3-203ENST00000453555 KNSTRNQ9Y448 316 aa12.97□□□□□ -0.33
CDC42EP3-203ENST00000453555 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.33
CDC42EP3-203ENST00000453555 PARD3Q8TEW0 1356 aa12.96□□□□□ -0.33
CDC42EP3-203ENST00000453555 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
CDC42EP3-203ENST00000453555 PLSCR1O15162 318 aa12.95□□□□□ -0.34
CDC42EP3-203ENST00000453555 MORC1Q86VD1 984 aa12.95□□□□□ -0.34
CDC42EP3-203ENST00000453555 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
CDC42EP3-203ENST00000453555 RAPGEF4Q8WZA2 1011 aa12.95□□□□□ -0.34
CDC42EP3-203ENST00000453555 NSD2O96028 1365 aa12.94□□□□□ -0.34
CDC42EP3-203ENST00000453555 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
CDC42EP3-203ENST00000453555 MNX1P50219 401 aaPredicted RBP12.94□□□□□ -0.34
CDC42EP3-203ENST00000453555 FKBP8Q14318 412 aa12.94□□□□□ -0.34
CDC42EP3-203ENST00000453555 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
CDC42EP3-203ENST00000453555 NBPF14Q5TI25 921 aa12.92□□□□□ -0.34
CDC42EP3-203ENST00000453555 PKD1L3Q7Z443 1732 aa12.92□□□□□ -0.34
CDC42EP3-203ENST00000453555 EYA1Q99502 592 aa12.92□□□□□ -0.34
CDC42EP3-203ENST00000453555 EIF4A2Q14240 407 aaKnown RBP12.91□□□□□ -0.34
CDC42EP3-203ENST00000453555 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
CDC42EP3-203ENST00000453555 SYTL4Q96C24 671 aaPredicted RBP12.91□□□□□ -0.34
CDC42EP3-203ENST00000453555 ITGB4P16144 1822 aa12.9□□□□□ -0.34
CDC42EP3-203ENST00000453555 PER1O15534 1290 aaPredicted RBP12.9□□□□□ -0.34
CDC42EP3-203ENST00000453555 TXNRD1Q16881 649 aa12.9□□□□□ -0.34
CDC42EP3-203ENST00000453555 CC2D1BQ5T0F9 858 aaKnown RBP12.9□□□□□ -0.34
CDC42EP3-203ENST00000453555 LRP5O75197 1615 aa12.9□□□□□ -0.34
CDC42EP3-203ENST00000453555 NCAPD2Q15021 1401 aa12.89□□□□□ -0.35
CDC42EP3-203ENST00000453555 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
CDC42EP3-203ENST00000453555 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
CDC42EP3-203ENST00000453555 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
CDC42EP3-203ENST00000453555 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
CDC42EP3-203ENST00000453555 ANO8Q9HCE9 1232 aaPredicted RBP12.88□□□□□ -0.35
CDC42EP3-203ENST00000453555 LY75O60449 1722 aa12.88□□□□□ -0.35
CDC42EP3-203ENST00000453555 CYP27B1O15528 508 aa12.87□□□□□ -0.35
CDC42EP3-203ENST00000453555 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
CDC42EP3-203ENST00000453555 CASZ1Q86V15 1759 aa12.85□□□□□ -0.35
CDC42EP3-203ENST00000453555 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
CDC42EP3-203ENST00000453555 STK32BQ9NY57 414 aa12.85□□□□□ -0.35
CDC42EP3-203ENST00000453555 IGSF1Q8N6C5 1336 aa12.85□□□□□ -0.35
CDC42EP3-203ENST00000453555 PAPPAQ13219 1627 aa12.84□□□□□ -0.35
CDC42EP3-203ENST00000453555 MTHFSP49914 203 aa12.84□□□□□ -0.35
CDC42EP3-203ENST00000453555 KCNQ4P56696 695 aa12.84□□□□□ -0.35
CDC42EP3-203ENST00000453555 LRRC4BQ9NT99 713 aa12.84□□□□□ -0.35
CDC42EP3-203ENST00000453555 SLC15A2Q16348 729 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms