RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 TUBGCP6Q96RT7 1819 aa19.55■□□□□ 0.72
RFTN1-207ENST00000453536 PPM1GO15355 546 aaPredicted RBP19.54■□□□□ 0.72
RFTN1-207ENST00000453536 KCNQ4P56696 695 aa19.53■□□□□ 0.72
RFTN1-207ENST00000453536 PANK3Q9H999 370 aa19.53■□□□□ 0.72
RFTN1-207ENST00000453536 INSRP06213 1382 aa19.53■□□□□ 0.72
RFTN1-207ENST00000453536 FLT4P35916 1363 aa19.53■□□□□ 0.72
RFTN1-207ENST00000453536 PLSCR1O15162 318 aa19.52■□□□□ 0.72
RFTN1-207ENST00000453536 TXNRD1Q16881 649 aa19.52■□□□□ 0.72
RFTN1-207ENST00000453536 NSD2O96028 1365 aa19.52■□□□□ 0.72
RFTN1-207ENST00000453536 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
RFTN1-207ENST00000453536 ITGB4P16144 1822 aa19.5■□□□□ 0.71
RFTN1-207ENST00000453536 LY75O60449 1722 aa19.49■□□□□ 0.71
RFTN1-207ENST00000453536 CGNL1Q0VF96 1302 aa19.49■□□□□ 0.71
RFTN1-207ENST00000453536 LRRC4BQ9NT99 713 aa19.48■□□□□ 0.71
RFTN1-207ENST00000453536 POLKQ9UBT6 870 aa19.48■□□□□ 0.71
RFTN1-207ENST00000453536 SMG6Q86US8 1419 aaKnown RBP19.48■□□□□ 0.71
RFTN1-207ENST00000453536 KIF7Q2M1P5 1343 aa19.48■□□□□ 0.71
RFTN1-207ENST00000453536 NBPF14Q5TI25 921 aa19.47■□□□□ 0.71
RFTN1-207ENST00000453536 ZCRB1Q8TBF4 217 aaKnown RBP19.47■□□□□ 0.71
RFTN1-207ENST00000453536 SYTL4Q96C24 671 aaPredicted RBP19.47■□□□□ 0.71
RFTN1-207ENST00000453536 PRIM1P49642 420 aaKnown RBP19.46■□□□□ 0.71
RFTN1-207ENST00000453536 ZNF827Q17R98 1081 aa19.46■□□□□ 0.71
RFTN1-207ENST00000453536 NCAPD2Q15021 1401 aa19.45■□□□□ 0.7
RFTN1-207ENST00000453536 ZBTB7AO95365 584 aa19.44■□□□□ 0.7
RFTN1-207ENST00000453536 CYP27B1O15528 508 aa19.43■□□□□ 0.7
RFTN1-207ENST00000453536 EYA1Q99502 592 aa19.43■□□□□ 0.7
RFTN1-207ENST00000453536 EIF4A2Q14240 407 aaKnown RBP19.42■□□□□ 0.7
RFTN1-207ENST00000453536 RAPGEF4Q8WZA2 1011 aa19.42■□□□□ 0.7
RFTN1-207ENST00000453536 WASHC2AQ641Q2 1341 aa19.42■□□□□ 0.7
RFTN1-207ENST00000453536 TATP17735 454 aaPredicted RBP19.41■□□□□ 0.7
RFTN1-207ENST00000453536 KIF24Q5T7B8 1368 aa19.41■□□□□ 0.7
RFTN1-207ENST00000453536 TAF1LQ8IZX4 1826 aa19.4■□□□□ 0.7
RFTN1-207ENST00000453536 CNGB1Q14028 1251 aaPredicted RBP19.4■□□□□ 0.7
RFTN1-207ENST00000453536 SLC15A2Q16348 729 aa19.4■□□□□ 0.7
RFTN1-207ENST00000453536 ATF5Q9Y2D1 282 aaPredicted RBP19.4■□□□□ 0.7
RFTN1-207ENST00000453536 STK32BQ9NY57 414 aa19.39■□□□□ 0.69
RFTN1-207ENST00000453536 C5P01031 1676 aa19.39■□□□□ 0.69
RFTN1-207ENST00000453536 QSER1Q2KHR3 1735 aa19.37■□□□□ 0.69
RFTN1-207ENST00000453536 AMER1Q5JTC6 1135 aaPredicted RBP19.36■□□□□ 0.69
RFTN1-207ENST00000453536 AEBP1Q8IUX7 1158 aa19.36■□□□□ 0.69
RFTN1-207ENST00000453536 PCDH11XQ9BZA7 1347 aa19.35■□□□□ 0.69
RFTN1-207ENST00000453536 PCDH11YQ9BZA8 1340 aa19.35■□□□□ 0.69
RFTN1-207ENST00000453536 PTGER2P43116 358 aa19.35■□□□□ 0.69
RFTN1-207ENST00000453536 SPON1Q9HCB6 807 aa19.35■□□□□ 0.69
RFTN1-207ENST00000453536 SMIM5Q71RC9 77 aa19.34■□□□□ 0.69
RFTN1-207ENST00000453536 MORC1Q86VD1 984 aa19.34■□□□□ 0.69
RFTN1-207ENST00000453536 AKT1S1Q96B36 256 aa19.34■□□□□ 0.69
RFTN1-207ENST00000453536 MPRIPQ6WCQ1 1025 aa19.33■□□□□ 0.68
RFTN1-207ENST00000453536 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
RFTN1-207ENST00000453536 CC2D1BQ5T0F9 858 aaKnown RBP19.32■□□□□ 0.68
RFTN1-207ENST00000453536 PNPLA7Q6ZV29 1317 aa19.31■□□□□ 0.68
RFTN1-207ENST00000453536 IGSF1Q8N6C5 1336 aa19.31■□□□□ 0.68
RFTN1-207ENST00000453536 AMIGO3Q86WK7 504 aa19.31■□□□□ 0.68
RFTN1-207ENST00000453536 KNSTRNQ9Y448 316 aa19.31■□□□□ 0.68
RFTN1-207ENST00000453536 UTRNP46939 3433 aa19.31■□□□□ 0.68
RFTN1-207ENST00000453536 PER1O15534 1290 aaPredicted RBP19.3■□□□□ 0.68
RFTN1-207ENST00000453536 PPP1R1BQ9UD71 204 aaPredicted RBP19.3■□□□□ 0.68
RFTN1-207ENST00000453536 CCNL1Q9UK58 526 aaPredicted RBP19.3■□□□□ 0.68
RFTN1-207ENST00000453536 COL24A1Q17RW2 1714 aa19.3■□□□□ 0.68
RFTN1-207ENST00000453536 PIGBQ92521 554 aa19.29■□□□□ 0.68
RFTN1-207ENST00000453536 SGIP1Q9BQI5 828 aa19.29■□□□□ 0.68
RFTN1-207ENST00000453536 PALLDQ8WX93 1383 aa19.29■□□□□ 0.68
RFTN1-207ENST00000453536 C4BP0C0L5 1744 aa19.28■□□□□ 0.68
RFTN1-207ENST00000453536 PHKG2P15735 406 aa19.28■□□□□ 0.68
RFTN1-207ENST00000453536 UBR3Q6ZT12 1888 aa19.28■□□□□ 0.68
RFTN1-207ENST00000453536 KDM6AO15550 1401 aaPredicted RBP19.27■□□□□ 0.68
RFTN1-207ENST00000453536 IL13P35225 146 aa19.25■□□□□ 0.67
RFTN1-207ENST00000453536 SLC27A3Q5K4L6 730 aa19.25■□□□□ 0.67
RFTN1-207ENST00000453536 ASAP1Q9ULH1 1129 aa19.25■□□□□ 0.67
RFTN1-207ENST00000453536 SPG7Q9UQ90 795 aa19.25■□□□□ 0.67
RFTN1-207ENST00000453536 COL3A1P02461 1466 aaPredicted RBP19.24■□□□□ 0.67
RFTN1-207ENST00000453536 NKX1-1Q15270 411 aaPredicted RBP19.24■□□□□ 0.67
RFTN1-207ENST00000453536 MTFR1LQ9H019 292 aa19.24■□□□□ 0.67
RFTN1-207ENST00000453536 GOLGB1Q14789 3259 aaKnown RBP19.23■□□□□ 0.67
RFTN1-207ENST00000453536 MTHFSP49914 203 aa19.23■□□□□ 0.67
RFTN1-207ENST00000453536 MSL1Q68DK7 614 aa19.23■□□□□ 0.67
RFTN1-207ENST00000453536 SULT6B1Q6IMI4 303 aa19.23■□□□□ 0.67
RFTN1-207ENST00000453536 COL23A1Q86Y22 540 aaPredicted RBP19.23■□□□□ 0.67
RFTN1-207ENST00000453536 FHDC1Q9C0D6 1143 aaPredicted RBP19.23■□□□□ 0.67
RFTN1-207ENST00000453536 TFCP2L1Q9NZI6 479 aa19.23■□□□□ 0.67
RFTN1-207ENST00000453536 SCN11AQ9UI33 1791 aa19.23■□□□□ 0.67
RFTN1-207ENST00000453536 HMOX1P09601 288 aa19.21■□□□□ 0.67
RFTN1-207ENST00000453536 IFNL2Q8IZJ0 200 aa19.21■□□□□ 0.67
RFTN1-207ENST00000453536 COL5A3P25940 1745 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-207ENST00000453536 ITPK1Q13572 414 aa19.2■□□□□ 0.66
RFTN1-207ENST00000453536 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-207ENST00000453536 LINC00116Q8NCU8 138 aa19.2■□□□□ 0.66
RFTN1-207ENST00000453536 SLC4A9Q96Q91 983 aa19.2■□□□□ 0.66
RFTN1-207ENST00000453536 ATG3Q9NT62 314 aa19.19■□□□□ 0.66
RFTN1-207ENST00000453536 TMOD3Q9NYL9 352 aa19.19■□□□□ 0.66
RFTN1-207ENST00000453536 MYH14Q7Z406 1995 aaKnown RBP19.19■□□□□ 0.66
RFTN1-207ENST00000453536 KDRP35968 1356 aa19.19■□□□□ 0.66
RFTN1-207ENST00000453536 MSH5O43196 834 aa19.18■□□□□ 0.66
RFTN1-207ENST00000453536 KLHL34Q8N239 644 aa19.18■□□□□ 0.66
RFTN1-207ENST00000453536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.18■□□□□ 0.66
RFTN1-207ENST00000453536 TJP1Q07157 1748 aa19.17■□□□□ 0.66
RFTN1-207ENST00000453536 PHF14O94880 888 aa19.17■□□□□ 0.66
RFTN1-207ENST00000453536 SYT17Q9BSW7 474 aa19.17■□□□□ 0.66
RFTN1-207ENST00000453536 ARXQ96QS3 562 aa19.16■□□□□ 0.66
RFTN1-207ENST00000453536 LOC102724428A0A0B4J2F2 783 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms