RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 HSPA1LP34931 641 aa20.56■□□□□ 0.88
SNX17-204ENST00000453453 GAS2L2Q8NHY3 880 aa20.56■□□□□ 0.88
SNX17-204ENST00000453453 TOM1L2Q6ZVM7 507 aa20.56■□□□□ 0.88
SNX17-204ENST00000453453 WDR63Q8IWG1 891 aa20.56■□□□□ 0.88
SNX17-204ENST00000453453 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
SNX17-204ENST00000453453 BTG4Q9NY30 223 aa20.56■□□□□ 0.88
SNX17-204ENST00000453453 STRN4Q9NRL3 753 aa20.55■□□□□ 0.88
SNX17-204ENST00000453453 ANP32AP39687 249 aaKnown RBP20.54■□□□□ 0.88
SNX17-204ENST00000453453 RAPGEF4Q8WZA2 1011 aa20.54■□□□□ 0.88
SNX17-204ENST00000453453 NWD2Q9ULI1 1742 aa20.54■□□□□ 0.88
SNX17-204ENST00000453453 CALD1Q05682 793 aaKnown RBP20.53■□□□□ 0.88
SNX17-204ENST00000453453 E9PSI1 815 aa20.53■□□□□ 0.88
SNX17-204ENST00000453453 PLEKHO1Q53GL0 409 aaPredicted RBP20.53■□□□□ 0.88
SNX17-204ENST00000453453 TRIM35Q9UPQ4 493 aa20.53■□□□□ 0.88
SNX17-204ENST00000453453 PLEKHG2Q9H7P9 1386 aa20.52■□□□□ 0.88
SNX17-204ENST00000453453 PARP4Q9UKK3 1724 aaKnown RBP20.52■□□□□ 0.88
SNX17-204ENST00000453453 TATP17735 454 aaPredicted RBP20.52■□□□□ 0.88
SNX17-204ENST00000453453 AMOTQ4VCS5 1084 aa20.52■□□□□ 0.88
SNX17-204ENST00000453453 CRB1P82279 1406 aa20.51■□□□□ 0.87
SNX17-204ENST00000453453 MTHFSDQ2M296 383 aaKnown RBP20.51■□□□□ 0.87
SNX17-204ENST00000453453 CDCA7LQ96GN5 454 aa20.51■□□□□ 0.87
SNX17-204ENST00000453453 CARD10Q9BWT7 1032 aa20.51■□□□□ 0.87
SNX17-204ENST00000453453 NRAPQ86VF7 1730 aa20.51■□□□□ 0.87
SNX17-204ENST00000453453 IPO9Q96P70 1041 aaKnown RBP20.5■□□□□ 0.87
SNX17-204ENST00000453453 SLFN5Q08AF3 891 aa20.49■□□□□ 0.87
SNX17-204ENST00000453453 LARP1Q6PKG0 1096 aaKnown RBP20.49■□□□□ 0.87
SNX17-204ENST00000453453 RTF1Q92541 710 aaKnown RBP20.49■□□□□ 0.87
SNX17-204ENST00000453453 IL16Q14005 1332 aa20.49■□□□□ 0.87
SNX17-204ENST00000453453 HTATSF1O43719 755 aaKnown RBP20.48■□□□□ 0.87
SNX17-204ENST00000453453 CCDC136Q96JN2 1154 aa20.48■□□□□ 0.87
SNX17-204ENST00000453453 MYH16Q9H6N6 1097 aa20.48■□□□□ 0.87
SNX17-204ENST00000453453 MAP3K5Q99683 1374 aa20.47■□□□□ 0.87
SNX17-204ENST00000453453 PKD1L3Q7Z443 1732 aa20.47■□□□□ 0.87
SNX17-204ENST00000453453 GNAT3A8MTJ3 354 aa20.46■□□□□ 0.87
SNX17-204ENST00000453453 ZNF530Q6P9A1 599 aaPredicted RBP20.46■□□□□ 0.87
SNX17-204ENST00000453453 SPG7Q9UQ90 795 aa20.46■□□□□ 0.87
SNX17-204ENST00000453453 MEGF6O75095 1541 aa20.46■□□□□ 0.87
SNX17-204ENST00000453453 SLIT2O94813 1529 aa20.46■□□□□ 0.87
SNX17-204ENST00000453453 C1orf141Q5JVX7 400 aa20.45■□□□□ 0.87
SNX17-204ENST00000453453 MEX3CQ5U5Q3 659 aaKnown RBP20.45■□□□□ 0.87
SNX17-204ENST00000453453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.45■□□□□ 0.875e-9■□□□□ 8.6
SNX17-204ENST00000453453 NGLY1Q96IV0 654 aa20.45■□□□□ 0.86
SNX17-204ENST00000453453 LRP6O75581 1613 aa20.44■□□□□ 0.86
SNX17-204ENST00000453453 DUSP27Q5VZP5 1158 aa20.44■□□□□ 0.86
SNX17-204ENST00000453453 C8orf37Q96NL8 207 aa20.44■□□□□ 0.86
SNX17-204ENST00000453453 OVOS2A0A0G2JMS6 1433 aa20.44■□□□□ 0.86
SNX17-204ENST00000453453 IL2RBP14784 551 aa20.43■□□□□ 0.86
SNX17-204ENST00000453453 AKAP4Q5JQC9 854 aa20.43■□□□□ 0.86
SNX17-204ENST00000453453 TRMT2AQ8IZ69 625 aaKnown RBP20.43■□□□□ 0.86
SNX17-204ENST00000453453 WNK3Q9BYP7 1800 aa20.42■□□□□ 0.86
SNX17-204ENST00000453453 GNAI1P63096 354 aa20.42■□□□□ 0.86
SNX17-204ENST00000453453 SPINK5Q9NQ38 1064 aaPredicted RBP20.42■□□□□ 0.86
SNX17-204ENST00000453453 IFT57Q9NWB7 429 aa20.42■□□□□ 0.86
SNX17-204ENST00000453453 USP35Q9P2H5 1018 aa20.42■□□□□ 0.86
SNX17-204ENST00000453453 LRRC37A3O60309 1634 aa20.41■□□□□ 0.86
SNX17-204ENST00000453453 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.41■□□□□ 0.86
SNX17-204ENST00000453453 VIRMAQ69YN4 1812 aaKnown RBP20.41■□□□□ 0.86
SNX17-204ENST00000453453 DCTN1Q14203 1278 aa20.41■□□□□ 0.86
SNX17-204ENST00000453453 MCM10Q7L590 875 aa20.41■□□□□ 0.86
SNX17-204ENST00000453453 THUMPD2Q9BTF0 503 aaKnown RBP20.41■□□□□ 0.86
SNX17-204ENST00000453453 RTL5Q5HYW3 569 aaPredicted RBP20.4■□□□□ 0.86
SNX17-204ENST00000453453 UNC5CLQ8IV45 518 aa20.4■□□□□ 0.86
SNX17-204ENST00000453453 ZBTB47Q9UFB7 747 aaPredicted RBP20.4■□□□□ 0.86
SNX17-204ENST00000453453 LAS1LQ9Y4W2 734 aaKnown RBP20.4■□□□□ 0.86
SNX17-204ENST00000453453 TCERG1O14776 1098 aaKnown RBP20.39■□□□□ 0.86
SNX17-204ENST00000453453 ZCRB1Q8TBF4 217 aaKnown RBP20.38■□□□□ 0.85
SNX17-204ENST00000453453 THRAP3Q9Y2W1 955 aaKnown RBP20.38■□□□□ 0.85
SNX17-204ENST00000453453 CCDC9Q9Y3X0 531 aaKnown RBP20.38■□□□□ 0.85
SNX17-204ENST00000453453 PCDH11XQ9BZA7 1347 aa20.38■□□□□ 0.85
SNX17-204ENST00000453453 PCDH11YQ9BZA8 1340 aa20.38■□□□□ 0.85
SNX17-204ENST00000453453 IFNL2Q8IZJ0 200 aa20.38■□□□□ 0.85
SNX17-204ENST00000453453 FNBP4Q8N3X1 1017 aaPredicted RBP20.38■□□□□ 0.85
SNX17-204ENST00000453453 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
SNX17-204ENST00000453453 CDCA7Q9BWT1 371 aaPredicted RBP20.38■□□□□ 0.85
SNX17-204ENST00000453453 SPATA31A1Q5TZJ5 1347 aa20.37■□□□□ 0.85
SNX17-204ENST00000453453 HSP90AB1P08238 724 aaKnown RBP20.37■□□□□ 0.85
SNX17-204ENST00000453453 MS4A1P11836 297 aa20.37■□□□□ 0.85
SNX17-204ENST00000453453 SPATA31A5Q5VU36 1347 aa20.36■□□□□ 0.85
SNX17-204ENST00000453453 SPATA31A7Q8IWB4 1347 aa20.36■□□□□ 0.85
SNX17-204ENST00000453453 BCL9LQ86UU0 1499 aa20.35■□□□□ 0.85
SNX17-204ENST00000453453 PHKG2P15735 406 aa20.35■□□□□ 0.85
SNX17-204ENST00000453453 TSR2Q969E8 191 aaKnown RBP20.35■□□□□ 0.85
SNX17-204ENST00000453453 USP21Q9UK80 565 aa20.35■□□□□ 0.85
SNX17-204ENST00000453453 RCAN3Q9UKA8 241 aa20.35■□□□□ 0.85
SNX17-204ENST00000453453 DISP2A7MBM2 1401 aa20.35■□□□□ 0.85
SNX17-204ENST00000453453 SCN11AQ9UI33 1791 aa20.35■□□□□ 0.85
SNX17-204ENST00000453453 ZNF853P0CG23 659 aa20.35■□□□□ 0.85
SNX17-204ENST00000453453 VPS72Q15906 364 aa20.35■□□□□ 0.85
SNX17-204ENST00000453453 CEMIPQ8WUJ3 1361 aa20.34■□□□□ 0.85
SNX17-204ENST00000453453 ADAMTS7Q9UKP4 1686 aa20.34■□□□□ 0.85
SNX17-204ENST00000453453 SHANK3Q9BYB0 1731 aa20.34■□□□□ 0.85
SNX17-204ENST00000453453 MPRIPQ6WCQ1 1025 aa20.34■□□□□ 0.85
SNX17-204ENST00000453453 IL17REQ8NFR9 667 aa20.34■□□□□ 0.85
SNX17-204ENST00000453453 RNMTO43148 476 aaKnown RBP20.33■□□□□ 0.84
SNX17-204ENST00000453453 CT47B1P0C2W7 299 aaPredicted RBP20.33■□□□□ 0.84
SNX17-204ENST00000453453 TEFQ10587 303 aa20.33■□□□□ 0.84
SNX17-204ENST00000453453 MBIPQ9NS73 344 aa20.32■□□□□ 0.84
SNX17-204ENST00000453453 BABAM1Q9NWV8 329 aa20.32■□□□□ 0.84
SNX17-204ENST00000453453 AFF2P51816 1311 aa20.32■□□□□ 0.84
SNX17-204ENST00000453453 CHL1O00533 1208 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms