RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 CHL1O00533 1208 aa31.62■■■□□ 2.65
MCF2L-219ENST00000453297 ZNF428Q96B54 188 aa31.62■■■□□ 2.65
MCF2L-219ENST00000453297 VAMP4O75379 141 aa31.61■■■□□ 2.65
MCF2L-219ENST00000453297 ALDH1L2Q3SY69 923 aa31.61■■■□□ 2.65
MCF2L-219ENST00000453297 GNAT3A8MTJ3 354 aa31.61■■■□□ 2.65
MCF2L-219ENST00000453297 ABCC6O95255 1503 aa31.6■■■□□ 2.65
MCF2L-219ENST00000453297 PANK1Q8TE04 598 aa31.6■■■□□ 2.65
MCF2L-219ENST00000453297 ERBB3P21860 1342 aa31.6■■■□□ 2.65
MCF2L-219ENST00000453297 LRRC37A3O60309 1634 aa31.6■■■□□ 2.65
MCF2L-219ENST00000453297 TSPYL6Q8N831 410 aa31.59■■■□□ 2.65
MCF2L-219ENST00000453297 MAP3K5Q99683 1374 aa31.59■■■□□ 2.65
MCF2L-219ENST00000453297 LTBP4Q8N2S1 1624 aa31.58■■■□□ 2.65
MCF2L-219ENST00000453297 CPDO75976 1380 aa31.58■■■□□ 2.65
MCF2L-219ENST00000453297 ZKSCAN2Q63HK3 967 aa31.58■■■□□ 2.65
MCF2L-219ENST00000453297 LMO7Q8WWI1 1683 aa31.58■■■□□ 2.65
MCF2L-219ENST00000453297 C8orf58Q8NAV2 365 aa31.57■■■□□ 2.64
MCF2L-219ENST00000453297 TNNQ9UQP3 1299 aa31.57■■■□□ 2.64
MCF2L-219ENST00000453297 TWISTNBQ3B726 338 aaPredicted RBP31.56■■■□□ 2.64
MCF2L-219ENST00000453297 KIAA0232Q92628 1395 aa31.55■■■□□ 2.64
MCF2L-219ENST00000453297 COG6Q9Y2V7 657 aa31.54■■■□□ 2.64
MCF2L-219ENST00000453297 ELL2O00472 640 aaPredicted RBP31.54■■■□□ 2.64
MCF2L-219ENST00000453297 RLBP1P12271 317 aa31.54■■■□□ 2.64
MCF2L-219ENST00000453297 BRPF1P55201 1214 aaPredicted RBP31.53■■■□□ 2.64
MCF2L-219ENST00000453297 CHRNA2Q15822 529 aa31.53■■■□□ 2.64
MCF2L-219ENST00000453297 IL17REQ8NFR9 667 aa31.52■■■□□ 2.64
MCF2L-219ENST00000453297 ABCA3Q99758 1704 aa31.52■■■□□ 2.64
MCF2L-219ENST00000453297 KIF16BQ96L93 1317 aa31.52■■■□□ 2.64
MCF2L-219ENST00000453297 PLEKHO1Q53GL0 409 aaPredicted RBP31.52■■■□□ 2.64
MCF2L-219ENST00000453297 NOB1Q9ULX3 412 aaKnown RBP31.52■■■□□ 2.64
MCF2L-219ENST00000453297 FAM208AQ9UK61 1670 aaKnown RBP31.51■■■□□ 2.64
MCF2L-219ENST00000453297 MS4A1P11836 297 aa31.51■■■□□ 2.63
MCF2L-219ENST00000453297 CLUAP1Q96AJ1 413 aa31.5■■■□□ 2.63
MCF2L-219ENST00000453297 AMOTQ4VCS5 1084 aa31.49■■■□□ 2.63
MCF2L-219ENST00000453297 ATF7IPQ6VMQ6 1270 aa31.49■■■□□ 2.63
MCF2L-219ENST00000453297 DZIP1LQ8IYY4 767 aaKnown RBP31.49■■■□□ 2.63
MCF2L-219ENST00000453297 MRPL50Q8N5N7 158 aaKnown RBP31.49■■■□□ 2.63
MCF2L-219ENST00000453297 MIS18AQ9NYP9 233 aa31.48■■■□□ 2.63
MCF2L-219ENST00000453297 TSPYL4Q9UJ04 414 aa31.48■■■□□ 2.63
MCF2L-219ENST00000453297 IPO8O15397 1037 aaKnown RBP31.47■■■□□ 2.63
MCF2L-219ENST00000453297 TRIM27P14373 513 aa31.47■■■□□ 2.63
MCF2L-219ENST00000453297 NLRP2Q9NX02 1062 aa31.47■■■□□ 2.63
MCF2L-219ENST00000453297 ROBO1Q9Y6N7 1651 aa31.47■■■□□ 2.63
MCF2L-219ENST00000453297 ZNF530Q6P9A1 599 aaPredicted RBP31.46■■■□□ 2.63
MCF2L-219ENST00000453297 KRT24Q2M2I5 525 aa31.45■■■□□ 2.63
MCF2L-219ENST00000453297 AKAP4Q5JQC9 854 aa31.45■■■□□ 2.63
MCF2L-219ENST00000453297 FTSJ3Q8IY81 847 aaKnown RBP31.45■■■□□ 2.63
MCF2L-219ENST00000453297 CEMIPQ8WUJ3 1361 aa31.45■■■□□ 2.62
MCF2L-219ENST00000453297 HAP1P54257 671 aaPredicted RBP31.44■■■□□ 2.62
MCF2L-219ENST00000453297 TSHZ2Q9NRE2 1034 aa31.44■■■□□ 2.62
MCF2L-219ENST00000453297 CSB-PGBD3P0DP91 1061 aa31.43■■■□□ 2.62
MCF2L-219ENST00000453297 AAMPQ13685 434 aa31.42■■■□□ 2.62
MCF2L-219ENST00000453297 MVPQ14764 893 aaKnown RBP31.42■■■□□ 2.62
MCF2L-219ENST00000453297 TAF7Q15545 349 aaPredicted RBP31.42■■■□□ 2.62
MCF2L-219ENST00000453297 PRDM11Q9NQV5 511 aa31.42■■■□□ 2.62
MCF2L-219ENST00000453297 BABAM1Q9NWV8 329 aa31.42■■■□□ 2.62
MCF2L-219ENST00000453297 TCERG1O14776 1098 aaKnown RBP31.4■■■□□ 2.62
MCF2L-219ENST00000453297 VIRMAQ69YN4 1812 aaKnown RBP31.4■■■□□ 2.62
MCF2L-219ENST00000453297 KDM2BQ8NHM5 1336 aa31.4■■■□□ 2.62
MCF2L-219ENST00000453297 RAPGEF4Q8WZA2 1011 aa31.4■■■□□ 2.62
MCF2L-219ENST00000453297 ARHGAP45Q92619 1136 aa31.4■■■□□ 2.62
MCF2L-219ENST00000453297 LGR6Q9HBX8 967 aa31.4■■■□□ 2.62
MCF2L-219ENST00000453297 AHDC1Q5TGY3 1603 aaPredicted RBP31.39■■■□□ 2.62
MCF2L-219ENST00000453297 C1orf141Q5JVX7 400 aa31.39■■■□□ 2.62
MCF2L-219ENST00000453297 TATP17735 454 aaPredicted RBP31.36■■■□□ 2.61
MCF2L-219ENST00000453297 CENPQQ7L2Z9 268 aaPredicted RBP31.36■■■□□ 2.61
MCF2L-219ENST00000453297 MEGF6O75095 1541 aa31.35■■■□□ 2.61
MCF2L-219ENST00000453297 MPRIPQ6WCQ1 1025 aa31.35■■■□□ 2.61
MCF2L-219ENST00000453297 TMEM57Q8N5G2 664 aa31.34■■■□□ 2.61
MCF2L-219ENST00000453297 OVOS2A0A0G2JMS6 1433 aa31.34■■■□□ 2.61
MCF2L-219ENST00000453297 PLEKHG2Q9H7P9 1386 aa31.34■■■□□ 2.61
MCF2L-219ENST00000453297 RNMTO43148 476 aaKnown RBP31.33■■■□□ 2.61
MCF2L-219ENST00000453297 WDR17Q8IZU2 1322 aa31.33■■■□□ 2.61
MCF2L-219ENST00000453297 DDX19BQ9UMR2 479 aa31.33■■■□□ 2.61
MCF2L-219ENST00000453297 KDM3BQ7LBC6 1761 aa31.32■■■□□ 2.61
MCF2L-219ENST00000453297 COL5A2P05997 1499 aaPredicted RBP31.32■■■□□ 2.61
MCF2L-219ENST00000453297 ADAMTS7Q9UKP4 1686 aa31.32■■■□□ 2.6
MCF2L-219ENST00000453297 ITPRIPQ8IWB1 547 aa31.32■■■□□ 2.6
MCF2L-219ENST00000453297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.32■■■□□ 2.6
MCF2L-219ENST00000453297 TEFQ10587 303 aa31.3■■■□□ 2.6
MCF2L-219ENST00000453297 SPG7Q9UQ90 795 aa31.3■■■□□ 2.6
MCF2L-219ENST00000453297 PKD1L3Q7Z443 1732 aa31.29■■■□□ 2.6
MCF2L-219ENST00000453297 API5Q9BZZ5 524 aaKnown RBP31.28■■■□□ 2.6
MCF2L-219ENST00000453297 SOS1Q07889 1333 aaPredicted RBP31.28■■■□□ 2.6
MCF2L-219ENST00000453297 COL22A1Q8NFW1 1626 aaPredicted RBP31.28■■■□□ 2.6
MCF2L-219ENST00000453297 IGHDP01880 384 aa31.27■■■□□ 2.6
MCF2L-219ENST00000453297 PCDHB15Q9Y5E8 787 aa31.27■■■□□ 2.6
MCF2L-219ENST00000453297 SIPA1L3O60292 1781 aaPredicted RBP31.27■■■□□ 2.6
MCF2L-219ENST00000453297 ABCC4O15439 1325 aa31.27■■■□□ 2.6
MCF2L-219ENST00000453297 TOM1L2Q6ZVM7 507 aa31.26■■■□□ 2.59
MCF2L-219ENST00000453297 SCN11AQ9UI33 1791 aa31.25■■■□□ 2.59
MCF2L-219ENST00000453297 PHKG2P15735 406 aa31.24■■■□□ 2.59
MCF2L-219ENST00000453297 PARP4Q9UKK3 1724 aaKnown RBP31.24■■■□□ 2.59
MCF2L-219ENST00000453297 BTBD11A6QL63 1104 aa31.23■■■□□ 2.59
MCF2L-219ENST00000453297 SLC4A2P04920 1241 aa31.23■■■□□ 2.59
MCF2L-219ENST00000453297 PHLPP1O60346 1717 aa31.23■■■□□ 2.59
MCF2L-219ENST00000453297 EIF4A1P60842 406 aaKnown RBP31.21■■■□□ 2.59
MCF2L-219ENST00000453297 IFNL2Q8IZJ0 200 aa31.21■■■□□ 2.59
MCF2L-219ENST00000453297 CARD10Q9BWT7 1032 aa31.21■■■□□ 2.59
MCF2L-219ENST00000453297 ZBTB40Q9NUA8 1239 aa31.21■■■□□ 2.59
MCF2L-219ENST00000453297 PTPRCP08575 1304 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms