RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ZCRB1Q8TBF4 217 aaKnown RBP20.16■□□□□ 0.82
LYSMD3-202ENST00000453259 MAP3K19Q56UN5 1328 aa20.16■□□□□ 0.82
LYSMD3-202ENST00000453259 NSD2O96028 1365 aa20.16■□□□□ 0.82
LYSMD3-202ENST00000453259 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
LYSMD3-202ENST00000453259 SYTL4Q96C24 671 aaPredicted RBP20.15■□□□□ 0.82
LYSMD3-202ENST00000453259 TONSLQ96HA7 1378 aa20.15■□□□□ 0.82
LYSMD3-202ENST00000453259 SMG6Q86US8 1419 aaKnown RBP20.14■□□□□ 0.81
LYSMD3-202ENST00000453259 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
LYSMD3-202ENST00000453259 GRIN3BO60391 1043 aa20.14■□□□□ 0.81
LYSMD3-202ENST00000453259 AMPHP49418 695 aa20.14■□□□□ 0.81
LYSMD3-202ENST00000453259 TUBGCP6Q96RT7 1819 aa20.13■□□□□ 0.81
LYSMD3-202ENST00000453259 SHANK3Q9BYB0 1731 aa20.13■□□□□ 0.81
LYSMD3-202ENST00000453259 USP47Q96K76 1375 aa20.13■□□□□ 0.81
LYSMD3-202ENST00000453259 MEGF6O75095 1541 aa20.12■□□□□ 0.81
LYSMD3-202ENST00000453259 GIGYF1O75420 1035 aaPredicted RBP20.12■□□□□ 0.81
LYSMD3-202ENST00000453259 LTV1Q96GA3 475 aaPredicted RBP20.12■□□□□ 0.81
LYSMD3-202ENST00000453259 TESK2Q96S53 571 aa20.12■□□□□ 0.81
LYSMD3-202ENST00000453259 CCNL1Q9UK58 526 aaPredicted RBP20.12■□□□□ 0.81
LYSMD3-202ENST00000453259 KIF24Q5T7B8 1368 aa20.11■□□□□ 0.81
LYSMD3-202ENST00000453259 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
LYSMD3-202ENST00000453259 FLAD1Q8NFF5 587 aa20.1■□□□□ 0.81
LYSMD3-202ENST00000453259 RAPGEF4Q8WZA2 1011 aa20.09■□□□□ 0.81
LYSMD3-202ENST00000453259 PCDH11XQ9BZA7 1347 aa20.07■□□□□ 0.8
LYSMD3-202ENST00000453259 PCDH11YQ9BZA8 1340 aa20.07■□□□□ 0.8
LYSMD3-202ENST00000453259 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
LYSMD3-202ENST00000453259 NLGN2Q8NFZ4 835 aa20.06■□□□□ 0.8
LYSMD3-202ENST00000453259 CD2APQ9Y5K6 639 aa20.06■□□□□ 0.8
LYSMD3-202ENST00000453259 INSRP06213 1382 aa20.06■□□□□ 0.8
LYSMD3-202ENST00000453259 NSD3Q9BZ95 1437 aa20.05■□□□□ 0.8
LYSMD3-202ENST00000453259 ST20-MTHFSA0A0A6YYL1 179 aa20.05■□□□□ 0.8
LYSMD3-202ENST00000453259 C5P01031 1676 aa20.05■□□□□ 0.8
LYSMD3-202ENST00000453259 GOLGB1Q14789 3259 aaKnown RBP20.05■□□□□ 0.8
LYSMD3-202ENST00000453259 RGPD2P0DJD1 1756 aa20.05■□□□□ 0.8
LYSMD3-202ENST00000453259 TATP17735 454 aaPredicted RBP20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 KCNQ4P56696 695 aa20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 NBPF6Q5VWK0 638 aa20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 COL23A1Q86Y22 540 aaPredicted RBP20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 NBPF4Q96M43 638 aa20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 FLT4P35916 1363 aa20.04■□□□□ 0.8
LYSMD3-202ENST00000453259 FYB1O15117 783 aa20.02■□□□□ 0.8
LYSMD3-202ENST00000453259 MSH5O43196 834 aa20.02■□□□□ 0.8
LYSMD3-202ENST00000453259 CDCA8Q53HL2 280 aa20.02■□□□□ 0.8
LYSMD3-202ENST00000453259 SMARCC1Q92922 1105 aaPredicted RBP20.02■□□□□ 0.8
LYSMD3-202ENST00000453259 PALLDQ8WX93 1383 aa20.01■□□□□ 0.79
LYSMD3-202ENST00000453259 TMF1P82094 1093 aa20.01■□□□□ 0.79
LYSMD3-202ENST00000453259 YBX3P16989 372 aaKnown RBP eCLIP20■□□□□ 0.79
LYSMD3-202ENST00000453259 RRS1Q15050 365 aaKnown RBP20■□□□□ 0.79
LYSMD3-202ENST00000453259 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
LYSMD3-202ENST00000453259 KIF20BQ96Q89 1820 aa19.97■□□□□ 0.79
LYSMD3-202ENST00000453259 PKD1L3Q7Z443 1732 aa19.97■□□□□ 0.79
LYSMD3-202ENST00000453259 NCAPD2Q15021 1401 aa19.97■□□□□ 0.79
LYSMD3-202ENST00000453259 FBLN1P23142 703 aa19.97■□□□□ 0.79
LYSMD3-202ENST00000453259 GGNBP2Q9H3C7 697 aa19.97■□□□□ 0.79
LYSMD3-202ENST00000453259 PLEKHG2Q9H7P9 1386 aa19.96■□□□□ 0.79
LYSMD3-202ENST00000453259 C4BP0C0L5 1744 aa19.96■□□□□ 0.79
LYSMD3-202ENST00000453259 ATP10DQ9P241 1426 aa19.95■□□□□ 0.78
LYSMD3-202ENST00000453259 HSP90AB2PQ58FF8 381 aa19.95■□□□□ 0.78
LYSMD3-202ENST00000453259 USHBP1Q8N6Y0 703 aa19.95■□□□□ 0.78
LYSMD3-202ENST00000453259 AK7Q96M32 723 aa19.95■□□□□ 0.78
LYSMD3-202ENST00000453259 ADCY9O60503 1353 aa19.95■□□□□ 0.78
LYSMD3-202ENST00000453259 SSFA2P28290 1259 aa19.94■□□□□ 0.78
LYSMD3-202ENST00000453259 NKX1-1Q15270 411 aaPredicted RBP19.94■□□□□ 0.78
LYSMD3-202ENST00000453259 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
LYSMD3-202ENST00000453259 MPRIPQ6WCQ1 1025 aa19.94■□□□□ 0.78
LYSMD3-202ENST00000453259 CYP27B1O15528 508 aa19.93■□□□□ 0.78
LYSMD3-202ENST00000453259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.93■□□□□ 0.78
LYSMD3-202ENST00000453259 GPBP1L1Q9HC44 474 aaPredicted RBP19.92■□□□□ 0.78
LYSMD3-202ENST00000453259 SPG7Q9UQ90 795 aa19.92■□□□□ 0.78
LYSMD3-202ENST00000453259 TOGARAM1Q9Y4F4 1720 aa19.92■□□□□ 0.78
LYSMD3-202ENST00000453259 ANKRD26Q9UPS8 1709 aa19.91■□□□□ 0.78
LYSMD3-202ENST00000453259 ITGB4P16144 1822 aa19.91■□□□□ 0.78
LYSMD3-202ENST00000453259 UBR3Q6ZT12 1888 aa19.91■□□□□ 0.78
LYSMD3-202ENST00000453259 CEP350Q5VT06 3117 aa19.89■□□□□ 0.78
LYSMD3-202ENST00000453259 IFFO2Q5TF58 517 aa19.89■□□□□ 0.77
LYSMD3-202ENST00000453259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.88■□□□□ 0.77
LYSMD3-202ENST00000453259 WASHC2AQ641Q2 1341 aa19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 IGSF1Q8N6C5 1336 aa19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 LOC102724428A0A0B4J2F2 783 aa19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 SIK1P57059 783 aa19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 PIGBQ92521 554 aa19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 MAP2P11137 1827 aaKnown RBP19.87■□□□□ 0.77
LYSMD3-202ENST00000453259 CICQ96RK0 1608 aaPredicted RBP19.86■□□□□ 0.77
LYSMD3-202ENST00000453259 HSPA6P17066 643 aa19.85■□□□□ 0.77
LYSMD3-202ENST00000453259 TMOD3Q9NYL9 352 aa19.85■□□□□ 0.77
LYSMD3-202ENST00000453259 EMILIN1Q9Y6C2 1016 aa19.84■□□□□ 0.77
LYSMD3-202ENST00000453259 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
LYSMD3-202ENST00000453259 IFNL2Q8IZJ0 200 aa19.83■□□□□ 0.77
LYSMD3-202ENST00000453259 PHF14O94880 888 aa19.82■□□□□ 0.76
LYSMD3-202ENST00000453259 CARD14Q9BXL6 1004 aa19.82■□□□□ 0.76
LYSMD3-202ENST00000453259 AMIGO3Q86WK7 504 aa19.81■□□□□ 0.76
LYSMD3-202ENST00000453259 LINC00116Q8NCU8 138 aa19.81■□□□□ 0.76
LYSMD3-202ENST00000453259 GNPATO15228 680 aa19.8■□□□□ 0.76
LYSMD3-202ENST00000453259 PHKG2P15735 406 aa19.8■□□□□ 0.76
LYSMD3-202ENST00000453259 ADRA2BP18089 450 aa19.8■□□□□ 0.76
LYSMD3-202ENST00000453259 KIF13BQ9NQT8 1826 aa19.8■□□□□ 0.76
LYSMD3-202ENST00000453259 ATP6V1AP38606 617 aa19.79■□□□□ 0.76
LYSMD3-202ENST00000453259 TGFB2P61812 414 aa19.79■□□□□ 0.76
LYSMD3-202ENST00000453259 EYA1Q99502 592 aa19.79■□□□□ 0.76
LYSMD3-202ENST00000453259 TIMELESSQ9UNS1 1208 aa19.79■□□□□ 0.76
LYSMD3-202ENST00000453259 PPM1GO15355 546 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms