RNA–Protein interactions for RNA: ENST00000453135.1

LINC01647-201, Transcript of long intergenic non-protein coding RNA 1647, humanhuman

TSL 1 (best) BASIC

Gene LINC01647, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01647-201ENST00000453135 NRAPQ86VF7 1730 aa11.75□□□□□ -0.53
LINC01647-201ENST00000453135 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.75□□□□□ -0.53
LINC01647-201ENST00000453135 PPP2R1AP30153 589 aa11.75□□□□□ -0.53
LINC01647-201ENST00000453135 TCP11L2Q8N4U5 519 aa11.75□□□□□ -0.53
LINC01647-201ENST00000453135 CARD10Q9BWT7 1032 aa11.75□□□□□ -0.53
LINC01647-201ENST00000453135 PARD3Q8TEW0 1356 aa11.75□□□□□ -0.53
LINC01647-201ENST00000453135 CRB1P82279 1406 aa11.75□□□□□ -0.53
LINC01647-201ENST00000453135 SMG6Q86US8 1419 aaKnown RBP11.75□□□□□ -0.53
LINC01647-201ENST00000453135 MAP2P11137 1827 aaKnown RBP11.74□□□□□ -0.53
LINC01647-201ENST00000453135 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
LINC01647-201ENST00000453135 THRAP3Q9Y2W1 955 aaKnown RBP11.74□□□□□ -0.53
LINC01647-201ENST00000453135 EIF4A2Q14240 407 aaKnown RBP11.73□□□□□ -0.53
LINC01647-201ENST00000453135 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
LINC01647-201ENST00000453135 PEAK1Q9H792 1746 aa11.73□□□□□ -0.53
LINC01647-201ENST00000453135 RGPD5Q99666 1765 aa11.72□□□□□ -0.53
LINC01647-201ENST00000453135 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
LINC01647-201ENST00000453135 NBPF6Q5VWK0 638 aa11.72□□□□□ -0.53
LINC01647-201ENST00000453135 BARGINQ6ZT62 677 aa11.72□□□□□ -0.53
LINC01647-201ENST00000453135 NBPF4Q96M43 638 aa11.72□□□□□ -0.53
LINC01647-201ENST00000453135 CFAP53Q96M91 514 aa11.72□□□□□ -0.53
LINC01647-201ENST00000453135 PRKRIP1Q9H875 184 aaPredicted RBP11.72□□□□□ -0.53
LINC01647-201ENST00000453135 CDK12Q9NYV4 1490 aaPredicted RBP11.71□□□□□ -0.53
LINC01647-201ENST00000453135 A0A0G2JS52 829 aa11.71□□□□□ -0.53
LINC01647-201ENST00000453135 ANP32CO43423 234 aa11.71□□□□□ -0.53
LINC01647-201ENST00000453135 NUBP1P53384 320 aa11.71□□□□□ -0.53
LINC01647-201ENST00000453135 MYT1Q01538 1121 aa11.71□□□□□ -0.53
LINC01647-201ENST00000453135 FARP1Q9Y4F1 1045 aaPredicted RBP11.71□□□□□ -0.53
LINC01647-201ENST00000453135 GLI3P10071 1580 aa11.71□□□□□ -0.54
LINC01647-201ENST00000453135 MYBBP1AQ9BQG0 1328 aaKnown RBP11.7□□□□□ -0.54
LINC01647-201ENST00000453135 DIAPH1O60610 1272 aaKnown RBP11.7□□□□□ -0.54
LINC01647-201ENST00000453135 IL13P35225 146 aa11.7□□□□□ -0.54
LINC01647-201ENST00000453135 SEPT12Q8IYM1 358 aa11.7□□□□□ -0.54
LINC01647-201ENST00000453135 EYA1Q99502 592 aa11.7□□□□□ -0.54
LINC01647-201ENST00000453135 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
LINC01647-201ENST00000453135 IL2RBP14784 551 aa11.69□□□□□ -0.54
LINC01647-201ENST00000453135 USHBP1Q8N6Y0 703 aa11.69□□□□□ -0.54
LINC01647-201ENST00000453135 RGS12O14924 1447 aa11.68□□□□□ -0.54
LINC01647-201ENST00000453135 ILDR2Q71H61 639 aa11.67□□□□□ -0.54
LINC01647-201ENST00000453135 RAPGEF4Q8WZA2 1011 aa11.67□□□□□ -0.54
LINC01647-201ENST00000453135 NUDCQ9Y266 331 aa11.67□□□□□ -0.54
LINC01647-201ENST00000453135 IGSF1Q8N6C5 1336 aa11.66□□□□□ -0.54
LINC01647-201ENST00000453135 FAM208AQ9UK61 1670 aaKnown RBP11.66□□□□□ -0.54
LINC01647-201ENST00000453135 EXOC5O00471 708 aa11.66□□□□□ -0.54
LINC01647-201ENST00000453135 U2SURPO15042 1029 aaKnown RBP11.66□□□□□ -0.54
LINC01647-201ENST00000453135 TATP17735 454 aaPredicted RBP11.66□□□□□ -0.54
LINC01647-201ENST00000453135 DDB1Q16531 1140 aa11.66□□□□□ -0.54
LINC01647-201ENST00000453135 COL3A1P02461 1466 aaPredicted RBP11.65□□□□□ -0.54
LINC01647-201ENST00000453135 PDE3BQ13370 1112 aa11.65□□□□□ -0.54
LINC01647-201ENST00000453135 SULT6B1Q6IMI4 303 aa11.65□□□□□ -0.54
LINC01647-201ENST00000453135 KRT27Q7Z3Y8 459 aa11.65□□□□□ -0.54
LINC01647-201ENST00000453135 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
LINC01647-201ENST00000453135 DISP2A7MBM2 1401 aa11.65□□□□□ -0.54
LINC01647-201ENST00000453135 NCAPD2Q15021 1401 aa11.64□□□□□ -0.55
LINC01647-201ENST00000453135 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
LINC01647-201ENST00000453135 THSD7AQ9UPZ6 1657 aa11.63□□□□□ -0.55
LINC01647-201ENST00000453135 HMOX1P09601 288 aa11.63□□□□□ -0.55
LINC01647-201ENST00000453135 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
LINC01647-201ENST00000453135 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
LINC01647-201ENST00000453135 AEBP1Q8IUX7 1158 aa11.63□□□□□ -0.55
LINC01647-201ENST00000453135 ZCRB1Q8TBF4 217 aaKnown RBP11.63□□□□□ -0.55
LINC01647-201ENST00000453135 RGPD2P0DJD1 1756 aa11.63□□□□□ -0.55
LINC01647-201ENST00000453135 MEGF6O75095 1541 aa11.62□□□□□ -0.55
LINC01647-201ENST00000453135 OVOS2A0A0G2JMS6 1433 aa11.61□□□□□ -0.55
LINC01647-201ENST00000453135 PLEKHO1Q53GL0 409 aaPredicted RBP11.61□□□□□ -0.55
LINC01647-201ENST00000453135 DDX54Q8TDD1 881 aaKnown RBP11.61□□□□□ -0.55
LINC01647-201ENST00000453135 SPG7Q9UQ90 795 aa11.61□□□□□ -0.55
LINC01647-201ENST00000453135 KDRP35968 1356 aa11.61□□□□□ -0.55
LINC01647-201ENST00000453135 TNS2Q63HR2 1409 aa11.6□□□□□ -0.55
LINC01647-201ENST00000453135 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
LINC01647-201ENST00000453135 FAM182BQ5T319 152 aa11.6□□□□□ -0.55
LINC01647-201ENST00000453135 MARCH10Q8NA82 808 aaPredicted RBP11.6□□□□□ -0.55
LINC01647-201ENST00000453135 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
LINC01647-201ENST00000453135 PARP4Q9UKK3 1724 aaKnown RBP11.6□□□□□ -0.55
LINC01647-201ENST00000453135 PLEKHG2Q9H7P9 1386 aa11.59□□□□□ -0.55
LINC01647-201ENST00000453135 FCHSD2O94868 740 aa11.59□□□□□ -0.55
LINC01647-201ENST00000453135 WDR43Q15061 677 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC01647-201ENST00000453135 FAM196AQ6ZSG2 479 aa11.59□□□□□ -0.55
LINC01647-201ENST00000453135 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
LINC01647-201ENST00000453135 RGPD1P0DJD0 1748 aa11.59□□□□□ -0.55
LINC01647-201ENST00000453135 PCDH11XQ9BZA7 1347 aa11.59□□□□□ -0.55
LINC01647-201ENST00000453135 PCDH11YQ9BZA8 1340 aa11.59□□□□□ -0.55
LINC01647-201ENST00000453135 WNK3Q9BYP7 1800 aa11.58□□□□□ -0.56
LINC01647-201ENST00000453135 PRKAR2BP31323 418 aa11.58□□□□□ -0.56
LINC01647-201ENST00000453135 CCDC184Q52MB2 194 aa11.58□□□□□ -0.56
LINC01647-201ENST00000453135 PNNQ9H307 717 aaKnown RBP11.58□□□□□ -0.56
LINC01647-201ENST00000453135 MRS2Q9HD23 443 aa11.58□□□□□ -0.56
LINC01647-201ENST00000453135 BRWD3Q6RI45 1802 aa11.58□□□□□ -0.56
LINC01647-201ENST00000453135 LRRC37A3O60309 1634 aa11.57□□□□□ -0.56
LINC01647-201ENST00000453135 CYP27B1O15528 508 aa11.57□□□□□ -0.56
LINC01647-201ENST00000453135 NEFMP07197 916 aa11.57□□□□□ -0.56
LINC01647-201ENST00000453135 ZNF530Q6P9A1 599 aaPredicted RBP11.57□□□□□ -0.56
LINC01647-201ENST00000453135 IFNL2Q8IZJ0 200 aa11.57□□□□□ -0.56
LINC01647-201ENST00000453135 CIZ1Q9ULV3 898 aaPredicted RBP11.57□□□□□ -0.56
LINC01647-201ENST00000453135 EP400Q96L91 3159 aa11.57□□□□□ -0.56
LINC01647-201ENST00000453135 PHKG2P15735 406 aa11.55□□□□□ -0.56
LINC01647-201ENST00000453135 MTHFSDQ2M296 383 aaKnown RBP11.55□□□□□ -0.56
LINC01647-201ENST00000453135 C1orf141Q5JVX7 400 aa11.55□□□□□ -0.56
LINC01647-201ENST00000453135 GAS2L2Q8NHY3 880 aa11.55□□□□□ -0.56
LINC01647-201ENST00000453135 PHACTR3Q96KR7 559 aa11.55□□□□□ -0.56
LINC01647-201ENST00000453135 ADAMTS8Q9UP79 889 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms