RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 GGNBP2Q9H3C7 697 aa16.38■□□□□ 0.21
GARNL3-210ENST00000453030 COL24A1Q17RW2 1714 aa16.38■□□□□ 0.21
GARNL3-210ENST00000453030 SMG6Q86US8 1419 aaKnown RBP16.37■□□□□ 0.21
GARNL3-210ENST00000453030 TMF1P82094 1093 aa16.37■□□□□ 0.21
GARNL3-210ENST00000453030 SYT17Q9BSW7 474 aa16.37■□□□□ 0.21
GARNL3-210ENST00000453030 NSD2O96028 1365 aa16.37■□□□□ 0.21
GARNL3-210ENST00000453030 SLC24A1O60721 1099 aa16.36■□□□□ 0.21
GARNL3-210ENST00000453030 KCNQ4P56696 695 aa16.36■□□□□ 0.21
GARNL3-210ENST00000453030 USHBP1Q8N6Y0 703 aa16.36■□□□□ 0.21
GARNL3-210ENST00000453030 ARXQ96QS3 562 aa16.36■□□□□ 0.21
GARNL3-210ENST00000453030 C5P01031 1676 aa16.36■□□□□ 0.21
GARNL3-210ENST00000453030 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
GARNL3-210ENST00000453030 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
GARNL3-210ENST00000453030 ITGB4P16144 1822 aa16.35■□□□□ 0.21
GARNL3-210ENST00000453030 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
GARNL3-210ENST00000453030 TOGARAM1Q9Y4F4 1720 aa16.34■□□□□ 0.21
GARNL3-210ENST00000453030 FYB1O15117 783 aa16.34■□□□□ 0.21
GARNL3-210ENST00000453030 ZCRB1Q8TBF4 217 aaKnown RBP16.34■□□□□ 0.21
GARNL3-210ENST00000453030 AKT1S1Q96B36 256 aa16.34■□□□□ 0.21
GARNL3-210ENST00000453030 ANKRD26Q9UPS8 1709 aa16.33■□□□□ 0.21
GARNL3-210ENST00000453030 NBPF6Q5VWK0 638 aa16.33■□□□□ 0.2
GARNL3-210ENST00000453030 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
GARNL3-210ENST00000453030 NBPF4Q96M43 638 aa16.33■□□□□ 0.2
GARNL3-210ENST00000453030 PNPLA7Q6ZV29 1317 aa16.33■□□□□ 0.2
GARNL3-210ENST00000453030 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.2
GARNL3-210ENST00000453030 MAP2P11137 1827 aaKnown RBP16.33■□□□□ 0.2
GARNL3-210ENST00000453030 NSD3Q9BZ95 1437 aa16.31■□□□□ 0.2
GARNL3-210ENST00000453030 FLT4P35916 1363 aa16.31■□□□□ 0.2
GARNL3-210ENST00000453030 MAP3K5Q99683 1374 aa16.31■□□□□ 0.2
GARNL3-210ENST00000453030 RAPGEF4Q8WZA2 1011 aa16.31■□□□□ 0.2
GARNL3-210ENST00000453030 TFCP2L1Q9NZI6 479 aa16.31■□□□□ 0.2
GARNL3-210ENST00000453030 TRIM26Q12899 539 aaPredicted RBP16.3■□□□□ 0.2
GARNL3-210ENST00000453030 CCNL1Q9UK58 526 aaPredicted RBP16.3■□□□□ 0.2
GARNL3-210ENST00000453030 INSRP06213 1382 aa16.29■□□□□ 0.2
GARNL3-210ENST00000453030 HSP90AB2PQ58FF8 381 aa16.29■□□□□ 0.2
GARNL3-210ENST00000453030 CGNL1Q0VF96 1302 aa16.28■□□□□ 0.2
GARNL3-210ENST00000453030 TATP17735 454 aaPredicted RBP16.28■□□□□ 0.2
GARNL3-210ENST00000453030 POLD1P28340 1107 aa16.28■□□□□ 0.2
GARNL3-210ENST00000453030 CDCA8Q53HL2 280 aa16.28■□□□□ 0.2
GARNL3-210ENST00000453030 SLC16A10Q8TF71 515 aa16.28■□□□□ 0.2
GARNL3-210ENST00000453030 PCDH11XQ9BZA7 1347 aa16.27■□□□□ 0.2
GARNL3-210ENST00000453030 PCDH11YQ9BZA8 1340 aa16.27■□□□□ 0.2
GARNL3-210ENST00000453030 ZNF784Q8NCA9 323 aaPredicted RBP16.27■□□□□ 0.2
GARNL3-210ENST00000453030 KIF24Q5T7B8 1368 aa16.26■□□□□ 0.19
GARNL3-210ENST00000453030 MSH5O43196 834 aa16.26■□□□□ 0.19
GARNL3-210ENST00000453030 EMILIN1Q9Y6C2 1016 aa16.26■□□□□ 0.19
GARNL3-210ENST00000453030 C4BP0C0L5 1744 aa16.25■□□□□ 0.19
GARNL3-210ENST00000453030 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
GARNL3-210ENST00000453030 PELP1Q8IZL8 1130 aaKnown RBP16.25■□□□□ 0.19
GARNL3-210ENST00000453030 CARD14Q9BXL6 1004 aa16.25■□□□□ 0.19
GARNL3-210ENST00000453030 GPR162Q16538 588 aa16.24■□□□□ 0.19
GARNL3-210ENST00000453030 PALLDQ8WX93 1383 aa16.24■□□□□ 0.19
GARNL3-210ENST00000453030 PPM1GO15355 546 aaPredicted RBP16.23■□□□□ 0.19
GARNL3-210ENST00000453030 MSL1Q68DK7 614 aa16.23■□□□□ 0.19
GARNL3-210ENST00000453030 NLGN2Q8NFZ4 835 aa16.23■□□□□ 0.19
GARNL3-210ENST00000453030 NCAPD2Q15021 1401 aa16.22■□□□□ 0.19
GARNL3-210ENST00000453030 CYP27B1O15528 508 aa16.22■□□□□ 0.19
GARNL3-210ENST00000453030 MPRIPQ6WCQ1 1025 aa16.22■□□□□ 0.19
GARNL3-210ENST00000453030 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
GARNL3-210ENST00000453030 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
GARNL3-210ENST00000453030 AK7Q96M32 723 aa16.16■□□□□ 0.18
GARNL3-210ENST00000453030 WASHC2AQ641Q2 1341 aa16.16■□□□□ 0.18
GARNL3-210ENST00000453030 PHF14O94880 888 aa16.15■□□□□ 0.18
GARNL3-210ENST00000453030 TNNT2P45379 298 aaPredicted RBP16.15■□□□□ 0.18
GARNL3-210ENST00000453030 PIGBQ92521 554 aa16.15■□□□□ 0.18
GARNL3-210ENST00000453030 SMARCC1Q92922 1105 aaPredicted RBP16.15■□□□□ 0.18
GARNL3-210ENST00000453030 EYA1Q99502 592 aa16.15■□□□□ 0.18
GARNL3-210ENST00000453030 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
GARNL3-210ENST00000453030 SPG7Q9UQ90 795 aa16.15■□□□□ 0.18
GARNL3-210ENST00000453030 YBX3P16989 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
GARNL3-210ENST00000453030 SMIM5Q71RC9 77 aa16.14■□□□□ 0.17
GARNL3-210ENST00000453030 AMIGO3Q86WK7 504 aa16.14■□□□□ 0.17
GARNL3-210ENST00000453030 FLAD1Q8NFF5 587 aa16.13■□□□□ 0.17
GARNL3-210ENST00000453030 POLKQ9UBT6 870 aa16.13■□□□□ 0.17
GARNL3-210ENST00000453030 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
GARNL3-210ENST00000453030 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
GARNL3-210ENST00000453030 TMOD3Q9NYL9 352 aa16.12■□□□□ 0.17
GARNL3-210ENST00000453030 COL5A3P25940 1745 aaPredicted RBP16.11■□□□□ 0.17
GARNL3-210ENST00000453030 SENP3-EIF4A1A0A087X0R7 540 aa16.11■□□□□ 0.17
GARNL3-210ENST00000453030 LOC102724428A0A0B4J2F2 783 aa16.11■□□□□ 0.17
GARNL3-210ENST00000453030 SIK1P57059 783 aa16.11■□□□□ 0.17
GARNL3-210ENST00000453030 EIF4A2Q14240 407 aaKnown RBP16.11■□□□□ 0.17
GARNL3-210ENST00000453030 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
GARNL3-210ENST00000453030 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.1■□□□□ 0.17
GARNL3-210ENST00000453030 PHKG2P15735 406 aa16.1■□□□□ 0.17
GARNL3-210ENST00000453030 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
GARNL3-210ENST00000453030 C1QTNF8P60827 252 aa16.1■□□□□ 0.17
GARNL3-210ENST00000453030 LINC00116Q8NCU8 138 aa16.1■□□□□ 0.17
GARNL3-210ENST00000453030 ASAP1Q9ULH1 1129 aa16.1■□□□□ 0.17
GARNL3-210ENST00000453030 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
GARNL3-210ENST00000453030 GIGYF1O75420 1035 aaPredicted RBP16.09■□□□□ 0.17
GARNL3-210ENST00000453030 IFNL2Q8IZJ0 200 aa16.09■□□□□ 0.17
GARNL3-210ENST00000453030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.09■□□□□ 0.17
GARNL3-210ENST00000453030 VIRMAQ69YN4 1812 aaKnown RBP16.09■□□□□ 0.17
GARNL3-210ENST00000453030 ZNF831Q5JPB2 1677 aa16.08■□□□□ 0.17
GARNL3-210ENST00000453030 C4AP0C0L4 1744 aa16.08■□□□□ 0.17
GARNL3-210ENST00000453030 GNPATO15228 680 aa16.08■□□□□ 0.16
GARNL3-210ENST00000453030 WWC3Q9ULE0 1092 aa16.08■□□□□ 0.16
GARNL3-210ENST00000453030 CD2APQ9Y5K6 639 aa16.08■□□□□ 0.16
GARNL3-210ENST00000453030 CEP350Q5VT06 3117 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms