RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 USP17L19D6RCP7 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 USP17L20D6RJB6 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 ERVH48-1M5A8F1 160 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 GRM5P41594 1212 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 SCTRP47872 440 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 USP17L24Q0WX57 530 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 STK32AQ8WU08 396 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 ZNF594Q96JF6 807 aaPredicted RBP7.39□□□□□ -1.23
VPS8-211ENST00000452140 CDK15Q96Q40 435 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 TMPRSS4Q9NRS4 437 aa7.39□□□□□ -1.23
VPS8-211ENST00000452140 NOVA2Q9UNW9 492 aaKnown RBP7.39□□□□□ -1.23
VPS8-211ENST00000452140 CLDN10P78369 228 aa7.38□□□□□ -1.23
VPS8-211ENST00000452140 LARP1Q6PKG0 1096 aaKnown RBP7.38□□□□□ -1.23
VPS8-211ENST00000452140 SEPT12Q8IYM1 358 aa7.38□□□□□ -1.23
VPS8-211ENST00000452140 OGFOD1Q8N543 542 aa7.38□□□□□ -1.23
VPS8-211ENST00000452140 KIAA1024Q9UPX6 916 aa7.38□□□□□ -1.23
VPS8-211ENST00000452140 NOD1Q9Y239 953 aa7.38□□□□□ -1.23
VPS8-211ENST00000452140 ATP5J2-PTCD1G3V325 749 aa7.37□□□□□ -1.23
VPS8-211ENST00000452140 ADH1CP00326 375 aa7.37□□□□□ -1.23
VPS8-211ENST00000452140 ALDH1A1P00352 501 aa7.37□□□□□ -1.23
VPS8-211ENST00000452140 NR3C2P08235 984 aa7.37□□□□□ -1.23
VPS8-211ENST00000452140 GTF2IP78347 998 aa7.37□□□□□ -1.23
VPS8-211ENST00000452140 PTK7Q13308 1070 aa7.37□□□□□ -1.23
VPS8-211ENST00000452140 CYLDQ9NQC7 956 aa7.37□□□□□ -1.23
VPS8-211ENST00000452140 GMPR2Q9P2T1 348 aaKnown RBP7.37□□□□□ -1.23
VPS8-211ENST00000452140 DACH1Q9UI36 760 aa7.37□□□□□ -1.23
VPS8-211ENST00000452140 FAM196BA6NMK8 535 aa7.36□□□□□ -1.23
VPS8-211ENST00000452140 LZTS3O60299 673 aaPredicted RBP7.36□□□□□ -1.23
VPS8-211ENST00000452140 TMEM164Q5U3C3 297 aa7.36□□□□□ -1.23
VPS8-211ENST00000452140 TRAIPQ9BWF2 469 aa7.36□□□□□ -1.23
VPS8-211ENST00000452140 DNAAF2Q9NVR5 837 aaKnown RBP7.36□□□□□ -1.23
VPS8-211ENST00000452140 TMEM88BA6NKF7 163 aa7.35□□□□□ -1.23
VPS8-211ENST00000452140 SMPD1P17405 629 aa7.35□□□□□ -1.23
VPS8-211ENST00000452140 PSME1Q06323 249 aa7.35□□□□□ -1.23
VPS8-211ENST00000452140 TRIM26Q12899 539 aaPredicted RBP7.35□□□□□ -1.23
VPS8-211ENST00000452140 TRIM50Q86XT4 487 aa7.35□□□□□ -1.23
VPS8-211ENST00000452140 CCDC116Q8IYX3 515 aa7.35□□□□□ -1.23
VPS8-211ENST00000452140 ZNF784Q8NCA9 323 aaPredicted RBP7.35□□□□□ -1.23
VPS8-211ENST00000452140 STAU1O95793 577 aaKnown RBP7.34□□□□□ -1.23
VPS8-211ENST00000452140 MYCP01106 439 aaPredicted RBP7.34□□□□□ -1.23
VPS8-211ENST00000452140 DPYDQ12882 1025 aa7.34□□□□□ -1.23
VPS8-211ENST00000452140 USP4Q13107 963 aa7.34□□□□□ -1.23
VPS8-211ENST00000452140 PPP1R26Q5T8A7 1209 aaPredicted RBP7.34□□□□□ -1.23
VPS8-211ENST00000452140 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
VPS8-211ENST00000452140 MPNDQ8N594 471 aa7.34□□□□□ -1.23
VPS8-211ENST00000452140 SENP2Q9HC62 589 aa7.34□□□□□ -1.23
VPS8-211ENST00000452140 USTQ9Y2C2 406 aa7.34□□□□□ -1.23
VPS8-211ENST00000452140 PCDHGA11Q9Y5H2 935 aa7.34□□□□□ -1.23
VPS8-211ENST00000452140 J3QL48 77 aa7.33□□□□□ -1.24
VPS8-211ENST00000452140 ZBTB7BO15156 539 aaPredicted RBP7.33□□□□□ -1.24
VPS8-211ENST00000452140 WFS1O76024 890 aa7.33□□□□□ -1.24
VPS8-211ENST00000452140 ATP1A2P50993 1020 aa7.33□□□□□ -1.24
VPS8-211ENST00000452140 NR5A1Q13285 461 aa7.33□□□□□ -1.24
VPS8-211ENST00000452140 NNTQ13423 1086 aa7.33□□□□□ -1.24
VPS8-211ENST00000452140 ELOAQ14241 798 aaKnown RBP7.33□□□□□ -1.24
VPS8-211ENST00000452140 AEBP1Q8IUX7 1158 aa7.33□□□□□ -1.24
VPS8-211ENST00000452140 ANKMY2Q8IV38 441 aa7.33□□□□□ -1.24
VPS8-211ENST00000452140 TPCN2Q8NHX9 752 aa7.33□□□□□ -1.24
VPS8-211ENST00000452140 WASF2Q9Y6W5 498 aa7.33□□□□□ -1.24
VPS8-211ENST00000452140 SFI1A8K8P3 1242 aa7.32□□□□□ -1.24
VPS8-211ENST00000452140 LGR5O75473 907 aa7.32□□□□□ -1.24
VPS8-211ENST00000452140 ERVK-9P63128 1117 aa7.32□□□□□ -1.24
VPS8-211ENST00000452140 DHX9Q08211 1270 aaKnown RBP7.32□□□□□ -1.24
VPS8-211ENST00000452140 CC2D2BQ6DHV5 1058 aa7.32□□□□□ -1.24
VPS8-211ENST00000452140 FAM200AQ8TCP9 573 aa7.32□□□□□ -1.24
VPS8-211ENST00000452140 SIRT1Q96EB6 747 aa7.32□□□□□ -1.24
VPS8-211ENST00000452140 ESF1Q9H501 851 aaKnown RBP7.32□□□□□ -1.24
VPS8-211ENST00000452140 ATP13A2Q9NQ11 1180 aa7.32□□□□□ -1.24
VPS8-211ENST00000452140 LILRA1O75019 489 aa7.31□□□□□ -1.24
VPS8-211ENST00000452140 DKK1O94907 266 aa7.31□□□□□ -1.24
VPS8-211ENST00000452140 CCDC102BQ68D86 513 aa7.31□□□□□ -1.24
VPS8-211ENST00000452140 CCDC125Q86Z20 511 aa7.31□□□□□ -1.24
VPS8-211ENST00000452140 SIX5Q8N196 739 aa7.31□□□□□ -1.24
VPS8-211ENST00000452140 LARGE2Q8N3Y3 721 aa7.31□□□□□ -1.24
VPS8-211ENST00000452140 OSBPL3Q9H4L5 887 aa7.31□□□□□ -1.24
VPS8-211ENST00000452140 KIFC2Q96AC6 838 aa7.3□□□□□ -1.24
VPS8-211ENST00000452140 SLAIN2Q9P270 581 aa7.3□□□□□ -1.24
VPS8-211ENST00000452140 ADD1P35611 737 aaKnown RBP7.29□□□□□ -1.24
VPS8-211ENST00000452140 PDE4CQ08493 712 aa7.29□□□□□ -1.24
VPS8-211ENST00000452140 FAM69CQ0P6D2 419 aa7.29□□□□□ -1.24
VPS8-211ENST00000452140 CBLBQ13191 982 aa7.29□□□□□ -1.24
VPS8-211ENST00000452140 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.29□□□□□ -1.24
VPS8-211ENST00000452140 TRIM47Q96LD4 638 aa7.29□□□□□ -1.24
VPS8-211ENST00000452140 PGPEP1Q9NXJ5 209 aa7.29□□□□□ -1.24
VPS8-211ENST00000452140 RBM19Q9Y4C8 960 aaKnown RBP7.29□□□□□ -1.24
VPS8-211ENST00000452140 SEC13P55735 322 aa7.28□□□□□ -1.24
VPS8-211ENST00000452140 HPS1Q92902 700 aa7.28□□□□□ -1.24
VPS8-211ENST00000452140 ITPKCQ96DU7 683 aa7.28□□□□□ -1.24
VPS8-211ENST00000452140 ZFAND3Q9H8U3 227 aa7.28□□□□□ -1.24
VPS8-211ENST00000452140 RAB6BQ9NRW1 208 aa7.28□□□□□ -1.24
VPS8-211ENST00000452140 EMILIN1Q9Y6C2 1016 aa7.28□□□□□ -1.24
VPS8-211ENST00000452140 ZIC2O95409 532 aaPredicted RBP7.27□□□□□ -1.25
VPS8-211ENST00000452140 SCNN1DP51172 638 aa7.27□□□□□ -1.25
VPS8-211ENST00000452140 WDR4P57081 412 aaKnown RBP7.27□□□□□ -1.25
VPS8-211ENST00000452140 NFX1Q12986 1120 aaKnown RBP7.27□□□□□ -1.25
VPS8-211ENST00000452140 TSEN2Q8NCE0 465 aaKnown RBP7.27□□□□□ -1.25
VPS8-211ENST00000452140 ETNK1Q9HBU6 452 aa7.27□□□□□ -1.25
VPS8-211ENST00000452140 ZNF358Q9NW07 568 aa7.27□□□□□ -1.25
VPS8-211ENST00000452140 TMEM229AB2RXF0 380 aa7.26□□□□□ -1.25
VPS8-211ENST00000452140 SNRPBP14678 240 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms