RNA–Protein interactions for RNA: ENST00000451881.5

CUL4A-204, Transcript of cullin 4A, humanhuman

TSL 5 BASIC

Gene CUL4A, Length 3,724 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-204ENST00000451881 TMEM57Q8N5G2 664 aa17.09■□□□□ 0.33
CUL4A-204ENST00000451881 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
CUL4A-204ENST00000451881 IPO8O15397 1037 aaKnown RBP17.08■□□□□ 0.33
CUL4A-204ENST00000451881 FKBP5Q13451 457 aaPredicted RBP17.08■□□□□ 0.33
CUL4A-204ENST00000451881 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
CUL4A-204ENST00000451881 IFT57Q9NWB7 429 aa17.08■□□□□ 0.32
CUL4A-204ENST00000451881 BTBD11A6QL63 1104 aa17.07■□□□□ 0.32
CUL4A-204ENST00000451881 VAMP4O75379 141 aa17.07■□□□□ 0.32
CUL4A-204ENST00000451881 LARP1Q6PKG0 1096 aaKnown RBP17.07■□□□□ 0.32
CUL4A-204ENST00000451881 TRMT2AQ8IZ69 625 aaKnown RBP17.07■□□□□ 0.32
CUL4A-204ENST00000451881 INSRP06213 1382 aa17.07■□□□□ 0.32
CUL4A-204ENST00000451881 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
CUL4A-204ENST00000451881 LRRC7Q96NW7 1537 aa17.07■□□□□ 0.32
CUL4A-204ENST00000451881 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
CUL4A-204ENST00000451881 ATF7IPQ6VMQ6 1270 aa17.06■□□□□ 0.32
CUL4A-204ENST00000451881 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
CUL4A-204ENST00000451881 MST1RQ04912 1400 aa17.06■□□□□ 0.32
CUL4A-204ENST00000451881 USP31Q70CQ4 1352 aa17.05■□□□□ 0.32
CUL4A-204ENST00000451881 ITSN1Q15811 1721 aa17.05■□□□□ 0.32
CUL4A-204ENST00000451881 HDGFL1Q5TGJ6 251 aa17.05■□□□□ 0.32
CUL4A-204ENST00000451881 NFATC2IPQ8NCF5 419 aa17.05■□□□□ 0.32
CUL4A-204ENST00000451881 MYL6BP14649 208 aa17.04■□□□□ 0.32
CUL4A-204ENST00000451881 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
CUL4A-204ENST00000451881 G2E3Q7L622 706 aa17.04■□□□□ 0.32
CUL4A-204ENST00000451881 SSH2Q76I76 1423 aa17.04■□□□□ 0.32
CUL4A-204ENST00000451881 USP32Q8NFA0 1604 aa17.03■□□□□ 0.32
CUL4A-204ENST00000451881 COL3A1P02461 1466 aaPredicted RBP17.03■□□□□ 0.32
CUL4A-204ENST00000451881 NALCNQ8IZF0 1738 aa17.03■□□□□ 0.32
CUL4A-204ENST00000451881 C8orf37Q96NL8 207 aa17.03■□□□□ 0.32
CUL4A-204ENST00000451881 ERBB3P21860 1342 aa17.03■□□□□ 0.32
CUL4A-204ENST00000451881 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
CUL4A-204ENST00000451881 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
CUL4A-204ENST00000451881 TOM1O60784 492 aa17.02■□□□□ 0.32
CUL4A-204ENST00000451881 IGHDP01880 384 aa17.02■□□□□ 0.32
CUL4A-204ENST00000451881 ERICH6BQ5W0A0 696 aa17.02■□□□□ 0.32
CUL4A-204ENST00000451881 RTL5Q5HYW3 569 aaPredicted RBP17.02■□□□□ 0.31
CUL4A-204ENST00000451881 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
CUL4A-204ENST00000451881 CHD2O14647 1828 aaKnown RBP17.01■□□□□ 0.31
CUL4A-204ENST00000451881 XRN1Q8IZH2 1706 aaKnown RBP17.01■□□□□ 0.31
CUL4A-204ENST00000451881 TTC5Q8N0Z6 440 aa17.01■□□□□ 0.31
CUL4A-204ENST00000451881 PCDHB15Q9Y5E8 787 aa17.01■□□□□ 0.31
CUL4A-204ENST00000451881 KIF20BQ96Q89 1820 aa17.01■□□□□ 0.31
CUL4A-204ENST00000451881 RNF123Q5XPI4 1314 aa17.01■□□□□ 0.31
CUL4A-204ENST00000451881 NGLY1Q96IV0 654 aa17■□□□□ 0.31
CUL4A-204ENST00000451881 CABP4P57796 275 aa17■□□□□ 0.31
CUL4A-204ENST00000451881 KNDC1Q76NI1 1749 aa17■□□□□ 0.31
CUL4A-204ENST00000451881 SPG7Q9UQ90 795 aa17■□□□□ 0.31
CUL4A-204ENST00000451881 RBM19Q9Y4C8 960 aaKnown RBP17■□□□□ 0.31
CUL4A-204ENST00000451881 MVPQ14764 893 aaKnown RBP16.99■□□□□ 0.31
CUL4A-204ENST00000451881 KIF16BQ96L93 1317 aa16.99■□□□□ 0.31
CUL4A-204ENST00000451881 CHL1O00533 1208 aa16.99■□□□□ 0.31
CUL4A-204ENST00000451881 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
CUL4A-204ENST00000451881 PDE3AQ14432 1141 aa16.98■□□□□ 0.31
CUL4A-204ENST00000451881 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
CUL4A-204ENST00000451881 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
CUL4A-204ENST00000451881 MAP3K5Q99683 1374 aa16.98■□□□□ 0.31
CUL4A-204ENST00000451881 ARHGEF10O15013 1369 aa16.97■□□□□ 0.31
CUL4A-204ENST00000451881 FAM182BQ5T319 152 aa16.97■□□□□ 0.31
CUL4A-204ENST00000451881 JARID2Q92833 1246 aaPredicted RBP16.97■□□□□ 0.31
CUL4A-204ENST00000451881 ACSBG1Q96GR2 724 aa16.97■□□□□ 0.31
CUL4A-204ENST00000451881 MRPL50Q8N5N7 158 aaKnown RBP16.97■□□□□ 0.31
CUL4A-204ENST00000451881 IL16Q14005 1332 aa16.97■□□□□ 0.31
CUL4A-204ENST00000451881 SHPRHQ149N8 1683 aa16.96■□□□□ 0.31
CUL4A-204ENST00000451881 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
CUL4A-204ENST00000451881 RNMTO43148 476 aaKnown RBP16.96■□□□□ 0.31
CUL4A-204ENST00000451881 MS4A1P11836 297 aa16.96■□□□□ 0.31
CUL4A-204ENST00000451881 AKAP4Q5JQC9 854 aa16.96■□□□□ 0.31
CUL4A-204ENST00000451881 LNPKQ9C0E8 428 aa16.95■□□□□ 0.3
CUL4A-204ENST00000451881 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
CUL4A-204ENST00000451881 ZCRB1Q8TBF4 217 aaKnown RBP16.95■□□□□ 0.3
CUL4A-204ENST00000451881 CHPF2Q9P2E5 772 aa16.95■□□□□ 0.3
CUL4A-204ENST00000451881 IFNL2Q8IZJ0 200 aa16.95■□□□□ 0.3
CUL4A-204ENST00000451881 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
CUL4A-204ENST00000451881 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
CUL4A-204ENST00000451881 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
CUL4A-204ENST00000451881 TNS3Q68CZ2 1445 aa16.94■□□□□ 0.3
CUL4A-204ENST00000451881 RWDD1Q9H446 243 aaPredicted RBP16.93■□□□□ 0.3
CUL4A-204ENST00000451881 IQSEC2Q5JU85 1478 aa16.93■□□□□ 0.3
CUL4A-204ENST00000451881 ANKRD45Q5TZF3 282 aa16.93■□□□□ 0.3
CUL4A-204ENST00000451881 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
CUL4A-204ENST00000451881 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
CUL4A-204ENST00000451881 ZNF853P0CG23 659 aa16.92■□□□□ 0.3
CUL4A-204ENST00000451881 PIK3C2AO00443 1686 aa16.92■□□□□ 0.3
CUL4A-204ENST00000451881 CYP27B1O15528 508 aa16.92■□□□□ 0.3
CUL4A-204ENST00000451881 IL2RBP14784 551 aa16.92■□□□□ 0.3
CUL4A-204ENST00000451881 MON2Q7Z3U7 1717 aa16.92■□□□□ 0.3
CUL4A-204ENST00000451881 ERICH6Q7L0X2 663 aa16.91■□□□□ 0.3
CUL4A-204ENST00000451881 CENPQQ7L2Z9 268 aaPredicted RBP16.91■□□□□ 0.3
CUL4A-204ENST00000451881 FLIIQ13045 1269 aa16.91■□□□□ 0.3
CUL4A-204ENST00000451881 MEIS3Q99687 375 aa16.9■□□□□ 0.3
CUL4A-204ENST00000451881 SOS2Q07890 1332 aaPredicted RBP16.9■□□□□ 0.3
CUL4A-204ENST00000451881 USP19O94966 1318 aa16.9■□□□□ 0.3
CUL4A-204ENST00000451881 ALDH1L2Q3SY69 923 aa16.89■□□□□ 0.29
CUL4A-204ENST00000451881 PDZRN3Q9UPQ7 1066 aa16.89■□□□□ 0.29
CUL4A-204ENST00000451881 PI4KAP2A4QPH2 592 aa16.89■□□□□ 0.29
CUL4A-204ENST00000451881 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
CUL4A-204ENST00000451881 PHKG2P15735 406 aa16.89■□□□□ 0.29
CUL4A-204ENST00000451881 PI4KAP1Q8N8J0 262 aa16.89■□□□□ 0.29
CUL4A-204ENST00000451881 ZNF496Q96IT1 587 aaPredicted RBP16.89■□□□□ 0.29
CUL4A-204ENST00000451881 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms