RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 DCTN1Q14203 1278 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 MTHFSDQ2M296 383 aaKnown RBP8.62□□□□□ -1.03
USP46-202ENST00000451218 PANK1Q8TE04 598 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 PCDHB15Q9Y5E8 787 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 OVOS2A0A0G2JMS6 1433 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 ATP10DQ9P241 1426 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 CHL1O00533 1208 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 TRIM27P14373 513 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 ARHGEF25Q86VW2 580 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 C8orf58Q8NAV2 365 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 DDX17Q92841 729 aaKnown RBP8.62□□□□□ -1.03
USP46-202ENST00000451218 PHLPP1O60346 1717 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 ITGB4P16144 1822 aa8.62□□□□□ -1.03
USP46-202ENST00000451218 TJP1Q07157 1748 aa8.61□□□□□ -1.03
USP46-202ENST00000451218 IFT57Q9NWB7 429 aa8.61□□□□□ -1.03
USP46-202ENST00000451218 CT47B1P0C2W7 299 aaPredicted RBP8.61□□□□□ -1.03
USP46-202ENST00000451218 ABCC4O15439 1325 aa8.61□□□□□ -1.03
USP46-202ENST00000451218 KRT24Q2M2I5 525 aa8.61□□□□□ -1.03
USP46-202ENST00000451218 SULT6B1Q6IMI4 303 aa8.61□□□□□ -1.03
USP46-202ENST00000451218 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
USP46-202ENST00000451218 KDM6AO15550 1401 aaPredicted RBP8.61□□□□□ -1.03
USP46-202ENST00000451218 KIAA0232Q92628 1395 aa8.6□□□□□ -1.03
USP46-202ENST00000451218 CFAP44Q96MT7 982 aa8.6□□□□□ -1.03
USP46-202ENST00000451218 PRKCSHP14314 528 aaPredicted RBP8.6□□□□□ -1.03
USP46-202ENST00000451218 NBPF6Q5VWK0 638 aa8.6□□□□□ -1.03
USP46-202ENST00000451218 NBPF4Q96M43 638 aa8.6□□□□□ -1.03
USP46-202ENST00000451218 EP400Q96L91 3159 aa8.6□□□□□ -1.03
USP46-202ENST00000451218 NUTM2GQ5VZR2 741 aa8.6□□□□□ -1.03
USP46-202ENST00000451218 IP6K1Q92551 441 aa8.6□□□□□ -1.03
USP46-202ENST00000451218 CICQ96RK0 1608 aaPredicted RBP8.6□□□□□ -1.03
USP46-202ENST00000451218 CPDO75976 1380 aa8.6□□□□□ -1.03
USP46-202ENST00000451218 ARFGEF2Q9Y6D5 1785 aa8.6□□□□□ -1.03
USP46-202ENST00000451218 BCL2L13Q9BXK5 485 aa8.6□□□□□ -1.03
USP46-202ENST00000451218 C19orf44Q9H6X5 657 aa8.59□□□□□ -1.03
USP46-202ENST00000451218 ZNF335Q9H4Z2 1342 aaPredicted RBP8.59□□□□□ -1.03
USP46-202ENST00000451218 CASZ1Q86V15 1759 aa8.59□□□□□ -1.03
USP46-202ENST00000451218 IL17REQ8NFR9 667 aa8.58□□□□□ -1.04
USP46-202ENST00000451218 ALDH1L2Q3SY69 923 aa8.58□□□□□ -1.04
USP46-202ENST00000451218 MCM10Q7L590 875 aa8.58□□□□□ -1.04
USP46-202ENST00000451218 RREB1Q92766 1687 aa8.58□□□□□ -1.04
USP46-202ENST00000451218 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
USP46-202ENST00000451218 COL5A2P05997 1499 aaPredicted RBP8.58□□□□□ -1.04
USP46-202ENST00000451218 SOS2Q07890 1332 aaPredicted RBP8.58□□□□□ -1.04
USP46-202ENST00000451218 KCPQ6ZWJ8 1503 aa8.58□□□□□ -1.04
USP46-202ENST00000451218 SIRT2Q8IXJ6 389 aa8.58□□□□□ -1.04
USP46-202ENST00000451218 PELP1Q8IZL8 1130 aaKnown RBP8.58□□□□□ -1.04
USP46-202ENST00000451218 NLRP6P59044 892 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 C8orf34Q49A92 452 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 BRINP3Q76B58 766 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 NGDNQ8NEJ9 315 aaKnown RBP8.57□□□□□ -1.04
USP46-202ENST00000451218 PLEKHG2Q9H7P9 1386 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 ESCO1Q5FWF5 840 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 MYH16Q9H6N6 1097 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 ZBTB40Q9NUA8 1239 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 XPCQ01831 940 aaPredicted RBP8.57□□□□□ -1.04
USP46-202ENST00000451218 ABTB2Q8N961 1025 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 SPATA31A3Q5VYP0 1347 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 GCP02774 474 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 MVPQ14764 893 aaKnown RBP8.57□□□□□ -1.04
USP46-202ENST00000451218 NOB1Q9ULX3 412 aaKnown RBP8.57□□□□□ -1.04
USP46-202ENST00000451218 COG6Q9Y2V7 657 aa8.57□□□□□ -1.04
USP46-202ENST00000451218 COL14A1Q05707 1796 aaKnown RBP8.56□□□□□ -1.04
USP46-202ENST00000451218 ERBB3P21860 1342 aa8.56□□□□□ -1.04
USP46-202ENST00000451218 MAP3K5Q99683 1374 aa8.56□□□□□ -1.04
USP46-202ENST00000451218 CCDC136Q96JN2 1154 aa8.56□□□□□ -1.04
USP46-202ENST00000451218 PXDNLA1KZ92 1463 aa8.55□□□□□ -1.04
USP46-202ENST00000451218 CLUAP1Q96AJ1 413 aa8.55□□□□□ -1.04
USP46-202ENST00000451218 LRRC59Q96AG4 307 aaKnown RBP8.55□□□□□ -1.04
USP46-202ENST00000451218 USHBP1Q8N6Y0 703 aa8.55□□□□□ -1.04
USP46-202ENST00000451218 MAPK8IP3Q9UPT6 1336 aa8.55□□□□□ -1.04
USP46-202ENST00000451218 ZBTB7BO15156 539 aaPredicted RBP8.55□□□□□ -1.04
USP46-202ENST00000451218 ATF7IPQ6VMQ6 1270 aa8.55□□□□□ -1.04
USP46-202ENST00000451218 TMEM57Q8N5G2 664 aa8.55□□□□□ -1.04
USP46-202ENST00000451218 LRP6O75581 1613 aa8.54□□□□□ -1.04
USP46-202ENST00000451218 DISP2A7MBM2 1401 aa8.54□□□□□ -1.04
USP46-202ENST00000451218 BACH2Q9BYV9 841 aa8.54□□□□□ -1.04
USP46-202ENST00000451218 AFDNP55196 1824 aaKnown RBP8.54□□□□□ -1.04
USP46-202ENST00000451218 NWD2Q9ULI1 1742 aa8.54□□□□□ -1.04
USP46-202ENST00000451218 KRT28Q7Z3Y7 464 aa8.53□□□□□ -1.04
USP46-202ENST00000451218 PDE4AP27815 886 aa8.53□□□□□ -1.04
USP46-202ENST00000451218 CENPQQ7L2Z9 268 aaPredicted RBP8.53□□□□□ -1.04
USP46-202ENST00000451218 PROSER2Q86WR7 435 aaPredicted RBP8.53□□□□□ -1.04
USP46-202ENST00000451218 ARHGAP45Q92619 1136 aa8.53□□□□□ -1.04
USP46-202ENST00000451218 LRP10Q7Z4F1 713 aa8.53□□□□□ -1.04
USP46-202ENST00000451218 SOX12O15370 315 aa8.52□□□□□ -1.04
USP46-202ENST00000451218 HTATSF1O43719 755 aaKnown RBP8.52□□□□□ -1.04
USP46-202ENST00000451218 DOT1LQ8TEK3 1739 aa8.52□□□□□ -1.04
USP46-202ENST00000451218 ZNF428Q96B54 188 aa8.52□□□□□ -1.05
USP46-202ENST00000451218 PNNQ9H307 717 aaKnown RBP8.52□□□□□ -1.05
USP46-202ENST00000451218 GNAI1P63096 354 aa8.52□□□□□ -1.05
USP46-202ENST00000451218 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
USP46-202ENST00000451218 MIS18AQ9NYP9 233 aa8.52□□□□□ -1.05
USP46-202ENST00000451218 HDAC1Q13547 482 aaPredicted RBP8.52□□□□□ -1.05
USP46-202ENST00000451218 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
USP46-202ENST00000451218 TNS2Q63HR2 1409 aa8.51□□□□□ -1.05
USP46-202ENST00000451218 TWISTNBQ3B726 338 aaPredicted RBP8.51□□□□□ -1.05
USP46-202ENST00000451218 G2E3Q7L622 706 aa8.51□□□□□ -1.05
USP46-202ENST00000451218 ZKSCAN2Q63HK3 967 aa8.5□□□□□ -1.05
USP46-202ENST00000451218 DZIP1LQ8IYY4 767 aaKnown RBP8.5□□□□□ -1.05
USP46-202ENST00000451218 ANKRD36CQ5JPF3 1778 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms