RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 NSD3Q9BZ95 1437 aa37.68■■■■□ 3.62
USP42-204ENST00000451154 MYOM1P52179 1685 aa37.66■■■■□ 3.62
USP42-204ENST00000451154 ZNF827Q17R98 1081 aa37.66■■■■□ 3.62
USP42-204ENST00000451154 INSRP06213 1382 aa37.66■■■■□ 3.62
USP42-204ENST00000451154 SMG6Q86US8 1419 aaKnown RBP37.65■■■■□ 3.62
USP42-204ENST00000451154 RAPGEF4Q8WZA2 1011 aa37.65■■■■□ 3.62
USP42-204ENST00000451154 MTFR1LQ9H019 292 aa37.64■■■■□ 3.62
USP42-204ENST00000451154 SHANK3Q9BYB0 1731 aa37.64■■■■□ 3.62
USP42-204ENST00000451154 PAPPAQ13219 1627 aa37.63■■■■□ 3.61
USP42-204ENST00000451154 KCNQ4P56696 695 aa37.63■■■■□ 3.61
USP42-204ENST00000451154 POLR3GLQ9BT43 218 aa37.63■■■■□ 3.61
USP42-204ENST00000451154 EMILIN1Q9Y6C2 1016 aa37.63■■■■□ 3.61
USP42-204ENST00000451154 FLT4P35916 1363 aa37.63■■■■□ 3.61
USP42-204ENST00000451154 SLC27A3Q5K4L6 730 aa37.62■■■■□ 3.61
USP42-204ENST00000451154 CGNL1Q0VF96 1302 aa37.61■■■■□ 3.61
USP42-204ENST00000451154 TATP17735 454 aaPredicted RBP37.61■■■■□ 3.61
USP42-204ENST00000451154 DCAF8L1A6NGE4 600 aa37.6■■■■□ 3.61
USP42-204ENST00000451154 DOT1LQ8TEK3 1739 aa37.59■■■■□ 3.61
USP42-204ENST00000451154 PPM1GO15355 546 aaPredicted RBP37.59■■■■□ 3.61
USP42-204ENST00000451154 AKT1S1Q96B36 256 aa37.59■■■■□ 3.61
USP42-204ENST00000451154 KIF24Q5T7B8 1368 aa37.58■■■■□ 3.61
USP42-204ENST00000451154 NSD2O96028 1365 aa37.57■■■■□ 3.61
USP42-204ENST00000451154 SGIP1Q9BQI5 828 aa37.57■■■■□ 3.6
USP42-204ENST00000451154 YY1P25490 414 aa37.53■■■■□ 3.6
USP42-204ENST00000451154 FHDC1Q9C0D6 1143 aaPredicted RBP37.53■■■■□ 3.6
USP42-204ENST00000451154 CCER1Q8TC90 406 aaPredicted RBP37.51■■■■□ 3.6
USP42-204ENST00000451154 HSPA5P11021 654 aaKnown RBP37.5■■■■□ 3.59
USP42-204ENST00000451154 SYT17Q9BSW7 474 aa37.5■■■■□ 3.59
USP42-204ENST00000451154 TFCP2L1Q9NZI6 479 aa37.5■■■■□ 3.59
USP42-204ENST00000451154 EIF4G2P78344 907 aaKnown RBP eCLIP37.49■■■■□ 3.59
USP42-204ENST00000451154 ARXQ96QS3 562 aa37.49■■■■□ 3.59
USP42-204ENST00000451154 CCNL1Q9UK58 526 aaPredicted RBP37.49■■■■□ 3.59
USP42-204ENST00000451154 MAP2P11137 1827 aaKnown RBP37.49■■■■□ 3.59
USP42-204ENST00000451154 PCDH11XQ9BZA7 1347 aa37.48■■■■□ 3.59
USP42-204ENST00000451154 PCDH11YQ9BZA8 1340 aa37.48■■■■□ 3.59
USP42-204ENST00000451154 CYP27B1O15528 508 aa37.47■■■■□ 3.59
USP42-204ENST00000451154 LY75O60449 1722 aa37.47■■■■□ 3.59
USP42-204ENST00000451154 WASHC2AQ641Q2 1341 aa37.46■■■■□ 3.59
USP42-204ENST00000451154 PNPLA7Q6ZV29 1317 aa37.46■■■■□ 3.59
USP42-204ENST00000451154 POLKQ9UBT6 870 aa37.45■■■■□ 3.59
USP42-204ENST00000451154 TNNT2P45379 298 aaPredicted RBP37.44■■■■□ 3.58
USP42-204ENST00000451154 SLC16A10Q8TF71 515 aa37.43■■■■□ 3.58
USP42-204ENST00000451154 MPRIPQ6WCQ1 1025 aa37.42■■■■□ 3.58
USP42-204ENST00000451154 EYA1Q99502 592 aa37.42■■■■□ 3.58
USP42-204ENST00000451154 PANK3Q9H999 370 aa37.4■■■■□ 3.58
USP42-204ENST00000451154 QSER1Q2KHR3 1735 aa37.39■■■■□ 3.58
USP42-204ENST00000451154 TUBGCP6Q96RT7 1819 aa37.39■■■■□ 3.58
USP42-204ENST00000451154 ANKRD26Q9UPS8 1709 aa37.37■■■■□ 3.57
USP42-204ENST00000451154 UTRNP46939 3433 aa37.36■■■■□ 3.57
USP42-204ENST00000451154 SPG7Q9UQ90 795 aa37.36■■■■□ 3.57
USP42-204ENST00000451154 NCAPD2Q15021 1401 aa37.36■■■■□ 3.57
USP42-204ENST00000451154 POLD1P28340 1107 aa37.34■■■■□ 3.57
USP42-204ENST00000451154 MSH5O43196 834 aa37.33■■■■□ 3.57
USP42-204ENST00000451154 EIF4A2Q14240 407 aaKnown RBP37.32■■■■□ 3.56
USP42-204ENST00000451154 NKX1-1Q15270 411 aaPredicted RBP37.32■■■■□ 3.56
USP42-204ENST00000451154 PKD1L3Q7Z443 1732 aa37.32■■■■□ 3.56
USP42-204ENST00000451154 COL23A1Q86Y22 540 aaPredicted RBP37.31■■■■□ 3.56
USP42-204ENST00000451154 ITGB4P16144 1822 aa37.31■■■■□ 3.56
USP42-204ENST00000451154 PALLDQ8WX93 1383 aa37.3■■■■□ 3.56
USP42-204ENST00000451154 KLHL34Q8N239 644 aa37.3■■■■□ 3.56
USP42-204ENST00000451154 PIGBQ92521 554 aa37.3■■■■□ 3.56
USP42-204ENST00000451154 MAP3K5Q99683 1374 aa37.29■■■■□ 3.56
USP42-204ENST00000451154 TOGARAM1Q9Y4F4 1720 aa37.28■■■■□ 3.56
USP42-204ENST00000451154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.27■■■■□ 3.56
USP42-204ENST00000451154 SMARCC1Q92922 1105 aaPredicted RBP37.26■■■■□ 3.56
USP42-204ENST00000451154 COL24A1Q17RW2 1714 aa37.25■■■■□ 3.55
USP42-204ENST00000451154 C5P01031 1676 aa37.22■■■■□ 3.55
USP42-204ENST00000451154 IFNL2Q8IZJ0 200 aa37.22■■■■□ 3.55
USP42-204ENST00000451154 PHKG2P15735 406 aa37.21■■■■□ 3.55
USP42-204ENST00000451154 TAF1LQ8IZX4 1826 aa37.21■■■■□ 3.55
USP42-204ENST00000451154 HMGB2P26583 209 aaKnown RBP37.2■■■■□ 3.55
USP42-204ENST00000451154 MSL1Q68DK7 614 aa37.2■■■■□ 3.55
USP42-204ENST00000451154 MORC1Q86VD1 984 aa37.2■■■■□ 3.55
USP42-204ENST00000451154 GPR162Q16538 588 aa37.19■■■■□ 3.54
USP42-204ENST00000451154 TMOD3Q9NYL9 352 aa37.19■■■■□ 3.54
USP42-204ENST00000451154 ASAP1Q9ULH1 1129 aa37.16■■■■□ 3.54
USP42-204ENST00000451154 IGSF1Q8N6C5 1336 aa37.15■■■■□ 3.54
USP42-204ENST00000451154 FLAD1Q8NFF5 587 aa37.15■■■■□ 3.54
USP42-204ENST00000451154 NLGN2Q8NFZ4 835 aa37.15■■■■□ 3.54
USP42-204ENST00000451154 GOLGB1Q14789 3259 aaKnown RBP37.14■■■■□ 3.54
USP42-204ENST00000451154 LOC102724428A0A0B4J2F2 783 aa37.14■■■■□ 3.54
USP42-204ENST00000451154 SIK1P57059 783 aa37.14■■■■□ 3.54
USP42-204ENST00000451154 AK7Q96M32 723 aa37.14■■■■□ 3.54
USP42-204ENST00000451154 KNSTRNQ9Y448 316 aa37.14■■■■□ 3.54
USP42-204ENST00000451154 SMIM5Q71RC9 77 aa37.13■■■■□ 3.53
USP42-204ENST00000451154 AMIGO3Q86WK7 504 aa37.13■■■■□ 3.53
USP42-204ENST00000451154 PELP1Q8IZL8 1130 aaKnown RBP37.12■■■■□ 3.53
USP42-204ENST00000451154 CHD4Q14839 1912 aa37.12■■■■□ 3.53
USP42-204ENST00000451154 C4BP0C0L5 1744 aa37.11■■■■□ 3.53
USP42-204ENST00000451154 LINC00116Q8NCU8 138 aa37.09■■■■□ 3.53
USP42-204ENST00000451154 ATG3Q9NT62 314 aa37.09■■■■□ 3.53
USP42-204ENST00000451154 PHF14O94880 888 aa37.08■■■■□ 3.53
USP42-204ENST00000451154 PLEKHO1Q53GL0 409 aaPredicted RBP37.08■■■■□ 3.53
USP42-204ENST00000451154 ZNF784Q8NCA9 323 aaPredicted RBP37.08■■■■□ 3.53
USP42-204ENST00000451154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP37.05■■■■□ 3.52
USP42-204ENST00000451154 ATP6V1AP38606 617 aa37.05■■■■□ 3.52
USP42-204ENST00000451154 ITPK1Q13572 414 aa37.05■■■■□ 3.52
USP42-204ENST00000451154 AEBP1Q8IUX7 1158 aa37.05■■■■□ 3.52
USP42-204ENST00000451154 KIF7Q2M1P5 1343 aa37.04■■■■□ 3.52
USP42-204ENST00000451154 ZNF530Q6P9A1 599 aaPredicted RBP37.03■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms