RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 LY75O60449 1722 aa13.82□□□□□ -0.2
LINC01238-204ENST00000451070 QSER1Q2KHR3 1735 aa13.82□□□□□ -0.2
LINC01238-204ENST00000451070 CDCA8Q53HL2 280 aa13.82□□□□□ -0.2
LINC01238-204ENST00000451070 ZCRB1Q8TBF4 217 aaKnown RBP13.82□□□□□ -0.2
LINC01238-204ENST00000451070 CARD14Q9BXL6 1004 aa13.82□□□□□ -0.2
LINC01238-204ENST00000451070 MTFR1LQ9H019 292 aa13.82□□□□□ -0.2
LINC01238-204ENST00000451070 NSD2O96028 1365 aa13.82□□□□□ -0.2
LINC01238-204ENST00000451070 TUBGCP6Q96RT7 1819 aa13.81□□□□□ -0.2
LINC01238-204ENST00000451070 PRIM1P49642 420 aaKnown RBP13.81□□□□□ -0.2
LINC01238-204ENST00000451070 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
LINC01238-204ENST00000451070 HSP90AB2PQ58FF8 381 aa13.8□□□□□ -0.2
LINC01238-204ENST00000451070 AKT1S1Q96B36 256 aa13.8□□□□□ -0.2
LINC01238-204ENST00000451070 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
LINC01238-204ENST00000451070 INSRP06213 1382 aa13.8□□□□□ -0.2
LINC01238-204ENST00000451070 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
LINC01238-204ENST00000451070 YY1P25490 414 aa13.79□□□□□ -0.2
LINC01238-204ENST00000451070 SLC27A3Q5K4L6 730 aa13.79□□□□□ -0.2
LINC01238-204ENST00000451070 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
LINC01238-204ENST00000451070 FLT4P35916 1363 aa13.79□□□□□ -0.2
LINC01238-204ENST00000451070 KIF24Q5T7B8 1368 aa13.79□□□□□ -0.2
LINC01238-204ENST00000451070 SMG6Q86US8 1419 aaKnown RBP13.79□□□□□ -0.2
LINC01238-204ENST00000451070 ANKRD26Q9UPS8 1709 aa13.78□□□□□ -0.2
LINC01238-204ENST00000451070 KCNQ4P56696 695 aa13.78□□□□□ -0.2
LINC01238-204ENST00000451070 SYT17Q9BSW7 474 aa13.78□□□□□ -0.2
LINC01238-204ENST00000451070 FHDC1Q9C0D6 1143 aaPredicted RBP13.78□□□□□ -0.2
LINC01238-204ENST00000451070 CGNL1Q0VF96 1302 aa13.78□□□□□ -0.2
LINC01238-204ENST00000451070 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
LINC01238-204ENST00000451070 COL24A1Q17RW2 1714 aa13.78□□□□□ -0.2
LINC01238-204ENST00000451070 MAP2P11137 1827 aaKnown RBP13.77□□□□□ -0.21
LINC01238-204ENST00000451070 EMILIN1Q9Y6C2 1016 aa13.77□□□□□ -0.21
LINC01238-204ENST00000451070 RAPGEF4Q8WZA2 1011 aa13.76□□□□□ -0.21
LINC01238-204ENST00000451070 UTRNP46939 3433 aa13.76□□□□□ -0.21
LINC01238-204ENST00000451070 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
LINC01238-204ENST00000451070 NCAPD2Q15021 1401 aa13.75□□□□□ -0.21
LINC01238-204ENST00000451070 PNPLA7Q6ZV29 1317 aa13.75□□□□□ -0.21
LINC01238-204ENST00000451070 DCAF8L1A6NGE4 600 aa13.75□□□□□ -0.21
LINC01238-204ENST00000451070 TATP17735 454 aaPredicted RBP13.75□□□□□ -0.21
LINC01238-204ENST00000451070 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
LINC01238-204ENST00000451070 ARXQ96QS3 562 aa13.75□□□□□ -0.21
LINC01238-204ENST00000451070 PCGF6Q9BYE7 350 aa13.75□□□□□ -0.21
LINC01238-204ENST00000451070 TOGARAM1Q9Y4F4 1720 aa13.75□□□□□ -0.21
LINC01238-204ENST00000451070 ITGB4P16144 1822 aa13.74□□□□□ -0.21
LINC01238-204ENST00000451070 MAP3K5Q99683 1374 aa13.73□□□□□ -0.21
LINC01238-204ENST00000451070 PCDH11XQ9BZA7 1347 aa13.73□□□□□ -0.21
LINC01238-204ENST00000451070 PCDH11YQ9BZA8 1340 aa13.73□□□□□ -0.21
LINC01238-204ENST00000451070 CYP27B1O15528 508 aa13.73□□□□□ -0.21
LINC01238-204ENST00000451070 SLC16A10Q8TF71 515 aa13.73□□□□□ -0.21
LINC01238-204ENST00000451070 CCNL1Q9UK58 526 aaPredicted RBP13.73□□□□□ -0.21
LINC01238-204ENST00000451070 TAF1LQ8IZX4 1826 aa13.73□□□□□ -0.21
LINC01238-204ENST00000451070 C5P01031 1676 aa13.72□□□□□ -0.21
LINC01238-204ENST00000451070 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
LINC01238-204ENST00000451070 CHD4Q14839 1912 aa13.72□□□□□ -0.21
LINC01238-204ENST00000451070 WASHC2AQ641Q2 1341 aa13.71□□□□□ -0.21
LINC01238-204ENST00000451070 PPM1GO15355 546 aaPredicted RBP13.7□□□□□ -0.22
LINC01238-204ENST00000451070 POLKQ9UBT6 870 aa13.7□□□□□ -0.22
LINC01238-204ENST00000451070 EYA1Q99502 592 aa13.69□□□□□ -0.22
LINC01238-204ENST00000451070 POLR3GLQ9BT43 218 aa13.69□□□□□ -0.22
LINC01238-204ENST00000451070 PALLDQ8WX93 1383 aa13.69□□□□□ -0.22
LINC01238-204ENST00000451070 HSPA5P11021 654 aaKnown RBP13.68□□□□□ -0.22
LINC01238-204ENST00000451070 NKX1-1Q15270 411 aaPredicted RBP13.68□□□□□ -0.22
LINC01238-204ENST00000451070 MPRIPQ6WCQ1 1025 aa13.68□□□□□ -0.22
LINC01238-204ENST00000451070 COL23A1Q86Y22 540 aaPredicted RBP13.68□□□□□ -0.22
LINC01238-204ENST00000451070 POLD1P28340 1107 aa13.67□□□□□ -0.22
LINC01238-204ENST00000451070 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
LINC01238-204ENST00000451070 PIGBQ92521 554 aa13.66□□□□□ -0.22
LINC01238-204ENST00000451070 C4BP0C0L5 1744 aa13.66□□□□□ -0.22
LINC01238-204ENST00000451070 GOLGB1Q14789 3259 aaKnown RBP13.66□□□□□ -0.22
LINC01238-204ENST00000451070 UBR3Q6ZT12 1888 aa13.65□□□□□ -0.22
LINC01238-204ENST00000451070 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
LINC01238-204ENST00000451070 EIF4A2Q14240 407 aaKnown RBP13.65□□□□□ -0.22
LINC01238-204ENST00000451070 KLHL34Q8N239 644 aa13.65□□□□□ -0.22
LINC01238-204ENST00000451070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.65□□□□□ -0.22
LINC01238-204ENST00000451070 SPG7Q9UQ90 795 aa13.65□□□□□ -0.22
LINC01238-204ENST00000451070 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
LINC01238-204ENST00000451070 ZNF784Q8NCA9 323 aaPredicted RBP13.64□□□□□ -0.23
LINC01238-204ENST00000451070 NLGN2Q8NFZ4 835 aa13.64□□□□□ -0.23
LINC01238-204ENST00000451070 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
LINC01238-204ENST00000451070 PANK3Q9H999 370 aa13.64□□□□□ -0.23
LINC01238-204ENST00000451070 MSH5O43196 834 aa13.63□□□□□ -0.23
LINC01238-204ENST00000451070 PHKG2P15735 406 aa13.63□□□□□ -0.23
LINC01238-204ENST00000451070 MSL1Q68DK7 614 aa13.63□□□□□ -0.23
LINC01238-204ENST00000451070 GPR162Q16538 588 aa13.62□□□□□ -0.23
LINC01238-204ENST00000451070 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
LINC01238-204ENST00000451070 IGSF1Q8N6C5 1336 aa13.62□□□□□ -0.23
LINC01238-204ENST00000451070 PLEKHG2Q9H7P9 1386 aa13.61□□□□□ -0.23
LINC01238-204ENST00000451070 SMIM5Q71RC9 77 aa13.61□□□□□ -0.23
LINC01238-204ENST00000451070 IFNL2Q8IZJ0 200 aa13.61□□□□□ -0.23
LINC01238-204ENST00000451070 FLAD1Q8NFF5 587 aa13.61□□□□□ -0.23
LINC01238-204ENST00000451070 LOC102724428A0A0B4J2F2 783 aa13.6□□□□□ -0.23
LINC01238-204ENST00000451070 HMGB2P26583 209 aaKnown RBP13.6□□□□□ -0.23
LINC01238-204ENST00000451070 SIK1P57059 783 aa13.6□□□□□ -0.23
LINC01238-204ENST00000451070 LINC00116Q8NCU8 138 aa13.6□□□□□ -0.23
LINC01238-204ENST00000451070 TMOD3Q9NYL9 352 aa13.6□□□□□ -0.23
LINC01238-204ENST00000451070 ASAP1Q9ULH1 1129 aa13.6□□□□□ -0.23
LINC01238-204ENST00000451070 AK7Q96M32 723 aa13.59□□□□□ -0.23
LINC01238-204ENST00000451070 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
LINC01238-204ENST00000451070 YBX3P16989 372 aaKnown RBP eCLIP13.58□□□□□ -0.24
LINC01238-204ENST00000451070 ITPK1Q13572 414 aa13.58□□□□□ -0.24
LINC01238-204ENST00000451070 ATG3Q9NT62 314 aa13.58□□□□□ -0.24
LINC01238-204ENST00000451070 PHF14O94880 888 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms